Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7097-01A-11R-2016-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
Similar Terms
Downloads & Tools


315 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-7097-01A-11R-2016-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACVR1C activin A receptor, type IC
ADAM9 ADAM metallopeptidase domain 9
AKAP11 A kinase (PRKA) anchor protein 11
ALDH1B1 aldehyde dehydrogenase 1 family, member B1
ALG11 ALG11, alpha-1,2-mannosyltransferase
ALG8 ALG8, alpha-1,3-glucosyltransferase
ALPL alkaline phosphatase, liver/bone/kidney
ANAPC1 anaphase promoting complex subunit 1
ANLN anillin, actin binding protein
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2
ARID3B AT rich interactive domain 3B (BRIGHT-like)
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ATP13A3 ATPase type 13A3
AURKA aurora kinase A
AURKAPS1 aurora kinase A pseudogene 1
BRCA2 breast cancer 2, early onset
BUB1 BUB1 mitotic checkpoint serine/threonine kinase
C12ORF77 chromosome 12 open reading frame 77
C16ORF62 chromosome 16 open reading frame 62
C1QC complement component 1, q subcomponent, C chain
C2CD3 C2 calcium-dependent domain containing 3
C5AR1 complement component 5a receptor 1
CADM3 cell adhesion molecule 3
CANX calnexin
CASQ2 calsequestrin 2 (cardiac muscle)
CCDC141 coiled-coil domain containing 141
CCDC171 coiled-coil domain containing 171
CCL13 chemokine (C-C motif) ligand 13
CCNJL cyclin J-like
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae)
CD163 CD163 molecule
CD209 CD209 molecule
CD300E CD300e molecule
CD80 CD80 molecule
CDCP1 CUB domain containing protein 1
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CDYL chromodomain protein, Y-like
CHGB chromogranin B
CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle)
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CKAP2 cytoskeleton associated protein 2
CLDN1 claudin 1
CLEC4G C-type lectin domain family 4, member G
COG3 component of oligomeric golgi complex 3
COL10A1 collagen, type X, alpha 1
COL25A1 collagen, type XXV, alpha 1
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen)
COX15 cytochrome c oxidase assembly homolog 15 (yeast)
CREM cAMP responsive element modulator
CSDC2 cold shock domain containing C2, RNA binding
CSE1L CSE1 chromosome segregation 1-like (yeast)
CTNNBL1 catenin, beta like 1
CTSL cathepsin L
CWC22 CWC22 spliceosome-associated protein
CYSLTR1 cysteinyl leukotriene receptor 1
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1)
DARS aspartyl-tRNA synthetase
DCLK1 doublecortin-like kinase 1
DCTN4 dynactin 4 (p62)
DCTN6 dynactin 6
DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
DIAPH3 diaphanous-related formin 3
DLEU2L deleted in lymphocytic leukemia 2-like
DLGAP4 discs, large (Drosophila) homolog-associated protein 4
DLL1 delta-like 1 (Drosophila)
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5
DPP3 dipeptidyl-peptidase 3
DSE dermatan sulfate epimerase
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2
DYSF dysferlin
EAF1 ELL associated factor 1
EFTUD2 elongation factor Tu GTP binding domain containing 2
EIF4A3 eukaryotic translation initiation factor 4A3
ESD esterase D
F13A1 coagulation factor XIII, A1 polypeptide
FAM168A family with sequence similarity 168, member A
FAM71C family with sequence similarity 71, member C
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FIGN fidgetin
FKBP15 FK506 binding protein 15, 133kDa
FMNL2 formin-like 2
FNDC3A fibronectin type III domain containing 3A
FNIP1 folliculin interacting protein 1
FPR3 formyl peptide receptor 3
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
GABRR3 gamma-aminobutyric acid (GABA) A receptor, rho 3 (gene/pseudogene)
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GEMIN5 gem (nuclear organelle) associated protein 5
GKN1 gastrokine 1
GMEB2 glucocorticoid modulatory element binding protein 2
GNLY granulysin
GPR88 G protein-coupled receptor 88
GSR glutathione reductase
GSTCD glutathione S-transferase, C-terminal domain containing
GZF1 GDNF-inducible zinc finger protein 1
HACD2 3-hydroxyacyl-CoA dehydratase 2
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HAUS6 HAUS augmin-like complex, subunit 6
HES6 hes family bHLH transcription factor 6
HIST1H2BB histone cluster 1, H2bb
HMMR hyaluronan-mediated motility receptor (RHAMM)
HOOK3 hook microtubule-tethering protein 3
HRH2 histamine receptor H2
HSPA4 heat shock 70kDa protein 4
HSPA9 heat shock 70kDa protein 9 (mortalin)
HSPH1 heat shock 105kDa/110kDa protein 1
HYALP1 hyaluronoglucosaminidase pseudogene 1
IBSP integrin-binding sialoprotein
IFNB1 interferon, beta 1, fibroblast
IL1RL1 interleukin 1 receptor-like 1
INTS6 integrator complex subunit 6
IPO5 importin 5
IPO7 importin 7
ITGB6 integrin, beta 6
KANK2 KN motif and ankyrin repeat domains 2
KCNK3 potassium channel, two pore domain subfamily K, member 3
KCNQ4 potassium channel, voltage gated KQT-like subfamily Q, member 4
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5
KDM1B lysine (K)-specific demethylase 1B
KDM2A lysine (K)-specific demethylase 2A
KIAA0226L KIAA0226-like
KIF14 kinesin family member 14
KPNA3 karyopherin alpha 3 (importin alpha 4)
LARP4 La ribonucleoprotein domain family, member 4
LARS leucyl-tRNA synthetase
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LEPROTL1 leptin receptor overlapping transcript-like 1
LILRA6 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
LINC00520 long intergenic non-protein coding RNA 520
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC646999 akirin 1 pseudogene
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1
MAK16 MAK16 homolog (S. cerevisiae)
MAP1A microtubule-associated protein 1A
MAP3K7CL MAP3K7 C-terminal like
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
MEF2A myocyte enhancer factor 2A
MEGF10 multiple EGF-like-domains 10
METTL7B methyltransferase like 7B
MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
MORC3 MORC family CW-type zinc finger 3
MPDZ multiple PDZ domain protein
MRPL48 mitochondrial ribosomal protein L48
MRS2 MRS2 magnesium transporter
MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase
MURC muscle-related coiled-coil protein
MUSK muscle, skeletal, receptor tyrosine kinase
MYBPH myosin binding protein H
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic
MYOG myogenin (myogenic factor 4)
NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit
NAV3 neuron navigator 3
NCAM1 neural cell adhesion molecule 1
NCEH1 neutral cholesterol ester hydrolase 1
NCF2 neutrophil cytosolic factor 2
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NES nestin
NEU3 sialidase 3 (membrane sialidase)
NFASC neurofascin
NNAT neuronatin
NOLC1 nucleolar and coiled-body phosphoprotein 1
NOMO2 NODAL modulator 2
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
NUP153 nucleoporin 153kDa
OLA1 Obg-like ATPase 1
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
OR10G2 olfactory receptor, family 10, subfamily G, member 2
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR6C3 olfactory receptor, family 6, subfamily C, member 3
ORC4 origin recognition complex, subunit 4
PAAF1 proteasomal ATPase-associated factor 1
PAPD5 PAP associated domain containing 5
PCA3 prostate cancer associated 3 (non-protein coding)
PCDHGA7 protocadherin gamma subfamily A, 7
PCDHGB7 protocadherin gamma subfamily B, 7
PCDHGC5 protocadherin gamma subfamily C, 5
PGAM5 phosphoglycerate mutase family member 5
PHF20 PHD finger protein 20
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PIGT phosphatidylinositol glycan anchor biosynthesis, class T
PITRM1 pitrilysin metallopeptidase 1
PLTP phospholipid transfer protein
POLD3 polymerase (DNA-directed), delta 3, accessory subunit
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
POMK protein-O-mannose kinase
PPME1 protein phosphatase methylesterase 1
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP6R3 protein phosphatase 6, regulatory subunit 3
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit
PRM3 protamine 3
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
PRPF6 pre-mRNA processing factor 6
PRRC2C proline-rich coiled-coil 2C
PRUNE2 prune homolog 2 (Drosophila)
PSIP1 PC4 and SFRS1 interacting protein 1
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
PTPN11 protein tyrosine phosphatase, non-receptor type 11
QKI QKI, KH domain containing, RNA binding
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic)
RAB6A RAB6A, member RAS oncogene family
RAB6C RAB6C, member RAS oncogene family
RB1 retinoblastoma 1
RBM26 RNA binding motif protein 26
RBM27 RNA binding motif protein 27
RBMS1 RNA binding motif, single stranded interacting protein 1
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
RDH5 retinol dehydrogenase 5 (11-cis/9-cis)
RELT RELT tumor necrosis factor receptor
RFT1 RFT1 homolog (S. cerevisiae)
RGS19 regulator of G-protein signaling 19
RIF1 replication timing regulatory factor 1
RIOK2 RIO kinase 2
RNF111 ring finger protein 111
RNF169 ring finger protein 169
RNF170 ring finger protein 170
RNGTT RNA guanylyltransferase and 5'-phosphatase
RPN2 ribophorin II
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RRAGA Ras-related GTP binding A
RRP1B ribosomal RNA processing 1B
RSF1 remodeling and spacing factor 1
RTEL1 regulator of telomere elongation helicase 1
RTFDC1 replication termination factor 2 domain containing 1
SARAF store-operated calcium entry-associated regulatory factor
SART3 squamous cell carcinoma antigen recognized by T cells 3
SCN5A sodium channel, voltage gated, type V alpha subunit
SEC24A SEC24 family member A
SF3A1 splicing factor 3a, subunit 1, 120kDa
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SHD Src homology 2 domain containing transforming protein D
SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin
SIGLEC12 sialic acid binding Ig-like lectin 12 (gene/pseudogene)
SIGLEC14 sialic acid binding Ig-like lectin 14
SIRPD signal-regulatory protein delta
SLC16A10 solute carrier family 16 (aromatic amino acid transporter), member 10
SLC17A2 solute carrier family 17, member 2
SLC25A30 solute carrier family 25, member 30
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
SLITRK4 SLIT and NTRK-like family, member 4
SLMO2 slowmo homolog 2 (Drosophila)
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa
SNORA2A small nucleolar RNA, H/ACA box 2A
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2
SON SON DNA binding protein
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPOPL speckle-type POZ protein-like
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SSB Sjogren syndrome antigen B (autoantigen La)
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STAR steroidogenic acute regulatory protein
STAU1 staufen double-stranded RNA binding protein 1
STK24 serine/threonine kinase 24
STK38L serine/threonine kinase 38 like
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
TAC4 tachykinin 4 (hemokinin)
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TAS2R41 taste receptor, type 2, member 41
TCAF1 TRPM8 channel-associated factor 1
TCOF1 Treacher Collins-Franceschetti syndrome 1
TENM2 teneurin transmembrane protein 2
TEP1 telomerase-associated protein 1
TEX19 testis expressed 19
TLL2 tolloid-like 2
TMEM8C transmembrane protein 8C
TMEM97 transmembrane protein 97
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b
TNNT2 troponin T type 2 (cardiac)
TOMM34 translocase of outer mitochondrial membrane 34
TOP1 topoisomerase (DNA) I
TOP1P1 topoisomerase (DNA) I pseudogene 1
TPD52L2 tumor protein D52-like 2
TRAP1 TNF receptor-associated protein 1
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
TTI1 TELO2 interacting protein 1
TTI2 TELO2 interacting protein 2
TTYH2 tweety family member 2
UBAP2L ubiquitin associated protein 2-like
UBFD1 ubiquitin family domain containing 1
UGT2B10 UDP glucuronosyltransferase 2 family, polypeptide B10
UGT2B7 UDP glucuronosyltransferase 2 family, polypeptide B7
UNC5A unc-5 homolog A (C. elegans)
UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
VDAC1 voltage-dependent anion channel 1
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae)
WASL Wiskott-Aldrich syndrome-like
WDR36 WD repeat domain 36
WDR55 WD repeat domain 55
WFDC11 WAP four-disulfide core domain 11
WRN Werner syndrome, RecQ helicase-like
XRRA1 X-ray radiation resistance associated 1
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
ZC3H13 zinc finger CCCH-type containing 13
ZC3H15 zinc finger CCCH-type containing 15
ZDHHC21 zinc finger, DHHC-type containing 21
ZNF281 zinc finger protein 281
ZNF557 zinc finger protein 557
ZNRD1-AS1 ZNRD1 antisense RNA 1
ZYX zyxin

low expression

Symbol Name
BCDIN3D BCDIN3 domain containing
MAPKAP1 mitogen-activated protein kinase associated protein 1
PEX10 peroxisomal biogenesis factor 10