Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JO-01B-11R-A34R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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277 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CV-A6JO-01B-11R-A34R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACTR3BP2 ACTR3B pseudogene 2
ADAM21 ADAM metallopeptidase domain 21
ADAM21P1 ADAM metallopeptidase domain 21 pseudogene 1
ADCY1 adenylate cyclase 1 (brain)
AIMP2 aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit
ANXA2P2 annexin A2 pseudogene 2
AP5Z1 adaptor-related protein complex 5, zeta 1 subunit
AREG amphiregulin
ARF1 ADP-ribosylation factor 1
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4
ARL4D ADP-ribosylation factor-like 4D
ARL8A ADP-ribosylation factor-like 8A
ATAD3B ATPase family, AAA domain containing 3B
B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
BATF2 basic leucine zipper transcription factor, ATF-like 2
BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2
BLVRA biliverdin reductase A
BLZF1 basic leucine zipper nuclear factor 1
BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1
BST2 bone marrow stromal cell antigen 2
C12ORF43 chromosome 12 open reading frame 43
C14ORF177 chromosome 14 open reading frame 177
C19ORF66 chromosome 19 open reading frame 66
C7ORF25 chromosome 7 open reading frame 25
C7ORF33 chromosome 7 open reading frame 33
C7ORF43 chromosome 7 open reading frame 43
CARD17 caspase recruitment domain family, member 17
CC2D1B coiled-coil and C2 domain containing 1B
CCDC51 coiled-coil domain containing 51
CCT3 chaperonin containing TCP1, subunit 3 (gamma)
CDC42SE1 CDC42 small effector 1
CERS2 ceramide synthase 2
CFB complement factor B
CFI complement factor I
CHMP5 charged multivesicular body protein 5
CHST12 carbohydrate (chondroitin 4) sulfotransferase 12
CLK2 CDC-like kinase 2
CRABP2 cellular retinoic acid binding protein 2
CSMD3 CUB and Sushi multiple domains 3
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTSC cathepsin C
CTSO cathepsin O
CXCL10 chemokine (C-X-C motif) ligand 10
DBNL drebrin-like
DCBLD1 discoidin, CUB and LCCL domain containing 1
DCBLD2 discoidin, CUB and LCCL domain containing 2
DDIT4 DNA-damage-inducible transcript 4
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like
DEDD death effector domain containing
DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNM3 dynamin 3
DPYSL4 dihydropyrimidinase-like 4
DUSP6 dual specificity phosphatase 6
DUSP7 dual specificity phosphatase 7
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1
DYRK3 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
EIF4A3 eukaryotic translation initiation factor 4A3
EME2 essential meiotic structure-specific endonuclease subunit 2
EPSTI1 epithelial stromal interaction 1 (breast)
ERAP2 endoplasmic reticulum aminopeptidase 2
ETV7 ets variant 7
EXOSC3 exosome component 3
FAM174A family with sequence similarity 174, member A
FAM188B family with sequence similarity 188, member B
FAM214B family with sequence similarity 214, member B
FAM3C family with sequence similarity 3, member C
FAM78B family with sequence similarity 78, member B
FANCD2OS FANCD2 opposite strand
FBXO10 F-box protein 10
FBXO6 F-box protein 6
FCRLB Fc receptor-like B
FSCN1 fascin actin-bundling protein 1
GALT galactose-1-phosphate uridylyltransferase
GARS glycyl-tRNA synthetase
GBP5 guanylate binding protein 5
GLIPR1 GLI pathogenesis-related 1
GPATCH4 G patch domain containing 4
GPR108 G protein-coupled receptor 108
HCFC1 host cell factor C1
HDAC9 histone deacetylase 9
HDX highly divergent homeobox
HES1 hes family bHLH transcription factor 1
HIST1H2BC histone cluster 1, H2bc
HIST1H4F histone cluster 1, H4f
HIST2H2AA3 histone cluster 2, H2aa3
HIST2H2AB histone cluster 2, H2ab
HIST3H2BB histone cluster 3, H2bb
HLA-L major histocompatibility complex, class I, L (pseudogene)
HRASLS2 HRAS-like suppressor 2
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled
HTRA2 HtrA serine peptidase 2
IDI2-AS1 IDI2 antisense RNA 1
IFI16 interferon, gamma-inducible protein 16
IFI44 interferon-induced protein 44
IFI6 interferon, alpha-inducible protein 6
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFNA8 interferon, alpha 8
IFNE interferon, epsilon
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1)
IGFL2 IGF-like family member 2
IL17RE interleukin 17 receptor E
IL33 interleukin 33
IQCF2 IQ motif containing F2
JUN jun proto-oncogene
KBTBD8 kelch repeat and BTB (POZ) domain containing 8
KDSR 3-ketodihydrosphingosine reductase
KIAA0020 KIAA0020
KIAA1161 KIAA1161
KIFAP3 kinesin-associated protein 3
KLHDC8B kelch domain containing 8B
KLHL20 kelch-like family member 20
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KRTAP20-2 keratin associated protein 20-2
LAD1 ladinin 1
LALBA lactalbumin, alpha-
LAP3 leucine aminopeptidase 3
LARS2 leucyl-tRNA synthetase 2, mitochondrial
LMNA lamin A/C
LOC494141 solute carrier family 25, member 51 pseudogene
LY6E lymphocyte antigen 6 complex, locus E
LYPLA2P1 lysophospholipase II pseudogene 1
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MALT1 MALT1 paracaspase
MAP3K10 mitogen-activated protein kinase kinase kinase 10
MAT2A methionine adenosyltransferase II, alpha
MBD1 methyl-CpG binding domain protein 1
MCL1 myeloid cell leukemia 1
MCOLN1 mucolipin 1
MEP1B meprin A, beta
METTL13 methyltransferase like 13
MFGE8 milk fat globule-EGF factor 8 protein
MIER2 mesoderm induction early response 1, family member 2
MLKL mixed lineage kinase domain-like
MPLKIP M-phase specific PLK1 interacting protein
MR1 major histocompatibility complex, class I-related
MRGPRX4 MAS-related GPR, member X4
MRPL32 mitochondrial ribosomal protein L32
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MRPL9 mitochondrial ribosomal protein L9
MST1R macrophage stimulating 1 receptor
MTNR1B melatonin receptor 1B
MYBPHL myosin binding protein H-like
NABP1 nucleic acid binding protein 1
NCDN neurochondrin
NIT1 nitrilase 1
NKIRAS1 NFKB inhibitor interacting Ras-like 1
NOL6 nucleolar protein 6 (RNA-associated)
NOX5 NADPH oxidase, EF-hand calcium binding domain 5
NPVF neuropeptide VF precursor
NT5C3A 5'-nucleotidase, cytosolic IIIA
NUDCD3 NudC domain containing 3
NUPL2 nucleoporin like 2
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OAZ3 ornithine decarboxylase antizyme 3
OCLM oculomedin
OPTN optineurin
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OSBPL3 oxysterol binding protein-like 3
PARP10 poly (ADP-ribose) polymerase family, member 10
PATE2 prostate and testis expressed 2
PCBP4 poly(rC) binding protein 4
PCDHB16 protocadherin beta 16
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor)
PEX11B peroxisomal biogenesis factor 11 beta
PFDN2 prefoldin subunit 2
PHLDA2 pleckstrin homology-like domain, family A, member 2
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PLEKHG5 pleckstrin homology domain containing, family G (with RhoGef domain) member 5
PMS2 PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
PPIAL4G peptidylprolyl isomerase A (cyclophilin A)-like 4G
PPP1R13L protein phosphatase 1, regulatory subunit 13 like
PRCC papillary renal cell carcinoma (translocation-associated)
PRO0628 uncharacterized LOC29053
PROM2 prominin 2
PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2
PTPN23 protein tyrosine phosphatase, non-receptor type 23
RAB29 RAB29, member RAS oncogene family
RAB38 RAB38, member RAS oncogene family
RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)
RALA v-ral simian leukemia viral oncogene homolog A (ras related)
RBM19 RNA binding motif protein 19
RBM41 RNA binding motif protein 41
RBP1 retinol binding protein 1, cellular
RETNLB resistin like beta
RGS2 regulator of G-protein signaling 2
RHOB ras homolog family member B
RIOK2 RIO kinase 2
RNF145 ring finger protein 145
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
RPSAP52 ribosomal protein SA pseudogene 52
RRAGA Ras-related GTP binding A
RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae)
RTKN rhotekin
RUSC1 RUN and SH3 domain containing 1
S100A10 S100 calcium binding protein A10
S100A11 S100 calcium binding protein A11
S100A2 S100 calcium binding protein A2
S100A6 S100 calcium binding protein A6
SAFB2 scaffold attachment factor B2
SCAMP3 secretory carrier membrane protein 3
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
SEC16B SEC16 homolog B (S. cerevisiae)
SERINC2 serine incorporator 2
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SESN2 sestrin 2
SETDB1 SET domain, bifurcated 1
SHB Src homology 2 domain containing adaptor protein B
SHISA5 shisa family member 5
SIGMAR1 sigma non-opioid intracellular receptor 1
SLC20A1 solute carrier family 20 (phosphate transporter), member 1
SLC27A3 solute carrier family 27 (fatty acid transporter), member 3
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9
SMIM3 small integral membrane protein 3
SMYD5 SMYD family member 5
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA20 small nucleolar RNA, H/ACA box 20
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA4 small nucleolar RNA, H/ACA box 4
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA59B small nucleolar RNA, H/ACA box 59B
SNORA80A small nucleolar RNA, H/ACA box 80A
SNORD89 small nucleolar RNA, C/D box 89
SP110 SP110 nuclear body protein
SP140L SP140 nuclear body protein-like
SPESP1 sperm equatorial segment protein 1
SRPX sushi-repeat containing protein, X-linked
STARD3NL STARD3 N-terminal like
STX6 syntaxin 6
SUGCT succinyl-CoA:glutarate-CoA transferase
TAP1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
TBRG4 transforming growth factor beta regulator 4
TFAP2E transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
TIGAR TP53 induced glycolysis regulatory phosphatase
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast)
TM4SF19 transmembrane 4 L six family member 19
TMED4 transmembrane emp24 protein transport domain containing 4
TMEM110 transmembrane protein 110
TMEM175 transmembrane protein 175
TMEM79 transmembrane protein 79
TNFRSF12A tumor necrosis factor receptor superfamily, member 12A
TOMM5 translocase of outer mitochondrial membrane 5 homolog (yeast)
TPRXL tetra-peptide repeat homeobox-like
TRABD2A TraB domain containing 2A
TRIM21 tripartite motif containing 21
TRIM22 tripartite motif containing 22
TRIML2 tripartite motif family-like 2
TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae)
TSACC TSSK6 activating co-chaperone
TSPAN10 tetraspanin 10
TSPYL1 TSPY-like 1
TSTD1 thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
TTLL13P tubulin tyrosine ligase-like family member 13, pseudogene
TXNDC17 thioredoxin domain containing 17
TYMP thymidine phosphorylase
UBAP2 ubiquitin associated protein 2
UBE2E2 ubiquitin-conjugating enzyme E2E 2
UBE2L6 ubiquitin-conjugating enzyme E2L 6
UBQLN3 ubiquilin 3
URGCP upregulator of cell proliferation
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
WARS tryptophanyl-tRNA synthetase
WTIP Wilms tumor 1 interacting protein
YKT6 YKT6 v-SNARE homolog (S. cerevisiae)
ZBP1 Z-DNA binding protein 1
ZFP37 ZFP37 zinc finger protein
ZMAT2 zinc finger, matrin-type 2
ZNF415 zinc finger protein 415
ZNF433 zinc finger protein 433
ZNF788 zinc finger family member 788

low expression

Symbol Name
EIF5 eukaryotic translation initiation factor 5