Hesperidin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Hesperidin perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Hesperidin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.12625
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.07346
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0686774
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0658289
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0639059
FTH1 ferritin, heavy polypeptide 1 0.0540348
RNF145 ring finger protein 145 0.0477459
WAC WW domain containing adaptor with coiled-coil 0.0473178
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0472026
EREG epiregulin 0.0458139
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0405322
PCBP2 poly(rC) binding protein 2 0.0390022
ENO1 enolase 1, (alpha) 0.0388198
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0380533
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0378476
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0373404
ANKRD11 ankyrin repeat domain 11 0.0362745
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0342556
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0341677
AREG amphiregulin 0.0335151
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0335073
FTL ferritin, light polypeptide 0.0331081
MED13L mediator complex subunit 13-like 0.0321434
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0315751
RPS23 ribosomal protein S23 0.0313079
B2M beta-2-microglobulin 0.0308831
TXNIP thioredoxin interacting protein 0.0304223
RPLP0 ribosomal protein, large, P0 0.0293444
UBA6 ubiquitin-like modifier activating enzyme 6 0.0289445
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.028923
XPO1 exportin 1 0.0287208
FNDC3B fibronectin type III domain containing 3B 0.0286554
NUP58 nucleoporin 58 0.0281295
YBX1 Y box binding protein 1 0.0280301
TRA2A transformer 2 alpha homolog (Drosophila) 0.0279891
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0279357
EPS8 epidermal growth factor receptor pathway substrate 8 0.0277209
KMT2E lysine (K)-specific methyltransferase 2E 0.0267675
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0262169
BCLAF1 BCL2-associated transcription factor 1 0.0261192
KIF5B kinesin family member 5B 0.0258602
PUM1 pumilio RNA-binding family member 1 0.0257448
PDIA6 protein disulfide isomerase family A, member 6 0.0256319
PTBP3 polypyrimidine tract binding protein 3 0.0254599
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0254219
KDM6A lysine (K)-specific demethylase 6A 0.0249516
RPL23 ribosomal protein L23 0.0245964
MATR3 matrin 3 0.0242951
GARS1 glycyl-tRNA synthetase 1 0.0240278
ZNF292 zinc finger protein 292 0.0237342
TM9SF3 transmembrane 9 superfamily member 3 0.0230401
PTEN phosphatase and tensin homolog 0.0227362
RPS25 ribosomal protein S25 0.022708
TPM3 tropomyosin 3 0.02269
DDIT4 DNA-damage-inducible transcript 4 0.0226507
EIF4A2 eukaryotic translation initiation factor 4A2 0.0223032
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0222665
POTEF POTE ankyrin domain family, member F 0.0221775
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0220053
YTHDC1 YTH domain containing 1 0.0218258
GPBP1 GC-rich promoter binding protein 1 0.0218
PDIA3 protein disulfide isomerase family A, member 3 0.0217826
VMP1 vacuole membrane protein 1 0.021732
RBM39 RNA binding motif protein 39 0.0216013
NAMPT nicotinamide phosphoribosyltransferase 0.0214746
SET SET nuclear proto-oncogene 0.0213628
WDR43 WD repeat domain 43 0.0212399
NCKAP1 NCK-associated protein 1 0.0211623
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0210625
CCNL1 cyclin L1 0.0206614
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.02063
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0206118
ERRFI1 ERBB receptor feedback inhibitor 1 0.0203959
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0203899
RAB1A RAB1A, member RAS oncogene family 0.020387
RSRC2 arginine/serine-rich coiled-coil 2 0.0201783
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0201563
CUL3 cullin 3 0.0200547
FAM13A family with sequence similarity 13, member A 0.0200184
TFG TRK-fused gene 0.0200181
ANXA1 annexin A1 0.0199458
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0196616
RAD21 RAD21 homolog (S. pombe) 0.0195693
ZNF148 zinc finger protein 148 0.0193337
PELI1 pellino E3 ubiquitin protein ligase 1 0.0191593
HELZ helicase with zinc finger 0.0190532
FXR1 fragile X mental retardation, autosomal homolog 1 0.0189175
CCNY cyclin Y 0.0188993
MBNL1 muscleblind-like splicing regulator 1 0.0187999
FRYL FRY-like 0.0187747
GLG1 golgi glycoprotein 1 0.0182216
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0182156
DSCAM Down syndrome cell adhesion molecule 0.0181396
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0180169
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.018016
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0179173
ATF4 activating transcription factor 4 0.0179123
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0178541
SLMAP sarcolemma associated protein 0.0176922
TSC22D2 TSC22 domain family, member 2 0.0176785

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.0704468
ONECUT3 one cut homeobox 3 -0.056343
TMSB10 thymosin beta 10 -0.0543833
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0540591
NALF1 NALCN channel auxiliary factor 1 -0.0474028
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0412561
CEMIP cell migration inducing protein, hyaluronan binding -0.0396976
H1-0 H1.0 linker histone -0.0359845
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0340999
ANXA2 annexin A2 -0.0327293
KLF5 Kruppel-like factor 5 (intestinal) -0.0316245
PRELID2 PRELI domain containing 2 -0.0277792
TPT1 tumor protein, translationally-controlled 1 -0.0277426
PRSS3 protease, serine, 3 -0.0266865
POF1B premature ovarian failure, 1B -0.026419
CADPS Ca++-dependent secretion activator -0.0263421
ANTXR2 anthrax toxin receptor 2 -0.0250663
NDRG1 N-myc downstream regulated 1 -0.0231559
RRBP1 ribosome binding protein 1 -0.0227011
MBD5 methyl-CpG binding domain protein 5 -0.0220572
PTPRK protein tyrosine phosphatase, receptor type, K -0.0216146
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0212129
VCL vinculin -0.0206697
BTBD9 BTB (POZ) domain containing 9 -0.0203669
GCC2 GRIP and coiled-coil domain containing 2 -0.0198802
FERMT1 fermitin family member 1 -0.0198548
TNS4 tensin 4 -0.0197823
FLNB filamin B, beta -0.0193552
TRIM2 tripartite motif containing 2 -0.0186652
PTPRR protein tyrosine phosphatase, receptor type, R -0.0183113
GMDS GDP-mannose 4,6-dehydratase -0.0180355
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0179835
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0179291
PATJ PATJ crumbs cell polarity complex component -0.0177983
LAMB3 laminin, beta 3 -0.017737
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0176557
MECOM MDS1 and EVI1 complex locus -0.0173992
MYO1D myosin ID -0.0172425
ACTN4 actinin, alpha 4 -0.0172241
MUC17 mucin 17, cell surface associated -0.0171445
LOC112694756 uncharaterized LOC112694756 -0.0170442
ITGB4 integrin, beta 4 -0.0167113
BACE2 beta-site APP-cleaving enzyme 2 -0.0163579
AHNAK AHNAK nucleoprotein -0.0160428
MT2A metallothionein 2A -0.0159996
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0158931
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0154271
PLEC plectin -0.0152352
PSD3 pleckstrin and Sec7 domain containing 3 -0.0151523
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0149745
TFF3 trefoil factor 3 (intestinal) -0.0148759
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0148138
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0148006
EFNB2 ephrin-B2 -0.0145712
NKD1 naked cuticle homolog 1 (Drosophila) -0.0145685
ATXN1 ataxin 1 -0.0143507
CD44 CD44 molecule (Indian blood group) -0.0143359
ZBTB20 zinc finger and BTB domain containing 20 -0.0142805
KIAA1217 KIAA1217 -0.0141465
NFIA nuclear factor I/A -0.0140663
PTPRB protein tyrosine phosphatase, receptor type, B -0.0140394
LAMA4 laminin, alpha 4 -0.0140261
TBC1D22A TBC1 domain family, member 22A -0.0139818
HDLBP high density lipoprotein binding protein -0.0138899
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0137712
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0135549
CCSER1 coiled-coil serine-rich protein 1 -0.0135364
ICA1 islet cell autoantigen 1, 69kDa -0.0135309
GREB1L growth regulation by estrogen in breast cancer-like -0.0134562
MYO1E myosin IE -0.0133663
NRN1 neuritin 1 -0.0130936
CEP95 centrosomal protein 95kDa -0.012947
RESF1 retroelement silencing factor 1 -0.0129262
BTG1 B-cell translocation gene 1, anti-proliferative -0.0129165
MTAP methylthioadenosine phosphorylase -0.0128132
FOXP1 forkhead box P1 -0.0127686
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0125607
CRYBG1 crystallin beta-gamma domain containing 1 -0.0125523
CAB39 calcium binding protein 39 -0.0125354
SH3D19 SH3 domain containing 19 -0.0125278
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0123833
PDIA4 protein disulfide isomerase family A, member 4 -0.012334
CCDC146 coiled-coil domain containing 146 -0.0122516
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0122293
AGR2 anterior gradient 2 -0.0120794
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0120119
KLF6 Kruppel-like factor 6 -0.0119287
RNF217 ring finger protein 217 -0.0117342
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0117302
GOLGB1 golgin B1 -0.0116995
GPHN gephyrin -0.0116245
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.011614
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0116086
SOX4 SRY (sex determining region Y)-box 4 -0.0115042
ABHD17C abhydrolase domain containing 17C -0.0114771
THSD4 thrombospondin, type I, domain containing 4 -0.0114681
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0113627
KDM7A lysine (K)-specific demethylase 7A -0.0113231
MPRIP myosin phosphatase Rho interacting protein -0.011271
MT1X metallothionein 1X -0.0112502