Hesperidin_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Hesperidin perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Hesperidin_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PGK1 phosphoglycerate kinase 1 0.125772
FN1 fibronectin 1 0.113846
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.109001
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.098603
SLTM SAFB-like, transcription modulator 0.0954474
CTNND1 catenin (cadherin-associated protein), delta 1 0.0755243
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0747852
COG5 component of oligomeric golgi complex 5 0.0723985
RPL26 ribosomal protein L26 0.069791
ZC3H15 zinc finger CCCH-type containing 15 0.0694028
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0693935
VIM vimentin 0.0682352
EFNA5 ephrin-A5 0.0666741
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0658466
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0648971
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0633706
RPS8 ribosomal protein S8 0.0631437
RAD51B RAD51 paralog B 0.0616359
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0612611
LMAN1 lectin, mannose-binding, 1 0.0598496
ASPH aspartate beta-hydroxylase 0.0595707
NALF1 NALCN channel auxiliary factor 1 0.0589362
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0580915
SND1 staphylococcal nuclease and tudor domain containing 1 0.0567989
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0536788
TTC3 tetratricopeptide repeat domain 3 0.052953
MATR3 matrin 3 0.0526436
TOP1 topoisomerase (DNA) I 0.0514779
FLNB filamin B, beta 0.0503818
PDLIM5 PDZ and LIM domain 5 0.0489016
ACBD3 acyl-CoA binding domain containing 3 0.0473832
USP34 ubiquitin specific peptidase 34 0.0459516
NPAS2 neuronal PAS domain protein 2 0.045242
SBF2 SET binding factor 2 0.0438848
DPYD dihydropyrimidine dehydrogenase 0.0438389
RAD23B RAD23 homolog B (S. cerevisiae) 0.0428045
FTL ferritin, light polypeptide 0.0421142
PSD3 pleckstrin and Sec7 domain containing 3 0.0412002
GOLGA4 golgin A4 0.0398554
GMDS GDP-mannose 4,6-dehydratase 0.0398551
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0394231
HOOK2 hook microtubule-tethering protein 2 0.0384808
SP100 SP100 nuclear antigen 0.0383788
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0382615
EHBP1 EH domain binding protein 1 0.0379129
GARS1 glycyl-tRNA synthetase 1 0.0377244
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.037547
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0372771
TRIO trio Rho guanine nucleotide exchange factor 0.0357897
RBM25 RNA binding motif protein 25 0.0355166
CSDE1 cold shock domain containing E1, RNA-binding 0.0353943
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0345943
DENND1A DENN/MADD domain containing 1A 0.0345936
KDM3A lysine (K)-specific demethylase 3A 0.0339548
RPL11 ribosomal protein L11 0.0336933
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0334905
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0334185
PHF21A PHD finger protein 21A 0.0331315
ITGA6 integrin, alpha 6 0.032109
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0317451
BRWD3 bromodomain and WD repeat domain containing 3 0.0315789
MARCHF6 membrane associated ring-CH-type finger 6 0.0313252
TIMP3 TIMP metallopeptidase inhibitor 3 0.0311454
SPAG9 sperm associated antigen 9 0.03101
ADAM17 ADAM metallopeptidase domain 17 0.0307308
PDE10A phosphodiesterase 10A 0.0305178
ACTG1 actin gamma 1 0.030503
FAF1 Fas (TNFRSF6) associated factor 1 0.0304878
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0301296
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0299407
THSD4 thrombospondin, type I, domain containing 4 0.029737
MBNL1 muscleblind-like splicing regulator 1 0.0294422
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0291135
ARHGAP5 Rho GTPase activating protein 5 0.0285741
TMSB10 thymosin beta 10 0.0285106
PTBP3 polypyrimidine tract binding protein 3 0.0280697
PUM2 pumilio RNA-binding family member 2 0.0275677
TES testin LIM domain protein 0.0269643
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.026947
ZBTB20 zinc finger and BTB domain containing 20 0.0268131
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0267945
CALD1 caldesmon 1 0.0266374
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0265119
PCBP2 poly(rC) binding protein 2 0.0265086
ANKRD10 ankyrin repeat domain 10 0.0263583
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0256816
BIRC6 baculoviral IAP repeat containing 6 0.0255526
INHBA inhibin, beta A 0.0253178
ZCCHC7 zinc finger, CCHC domain containing 7 0.02526
YEATS2 YEATS domain containing 2 0.0251898
MARCHF7 membrane associated ring-CH-type finger 7 0.0250191
SCAF11 SR-related CTD-associated factor 11 0.0248899
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0245146
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0243232
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0242577
RBM39 RNA binding motif protein 39 0.0241758
SEPTIN7 septin 7 0.0240088
APLP2 amyloid beta (A4) precursor-like protein 2 0.023999
QKI QKI, KH domain containing, RNA binding 0.0239718
MCTP1 multiple C2 domains, transmembrane 1 0.0238299

decreased expression

Symbol Name Standardized Value
BACE2 beta-site APP-cleaving enzyme 2 -0.155042
MUC16 mucin 16, cell surface associated -0.134153
GRB10 growth factor receptor-bound protein 10 -0.133734
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.114276
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.109833
NDRG1 N-myc downstream regulated 1 -0.10812
IGFBP3 insulin-like growth factor binding protein 3 -0.103102
MYO1E myosin IE -0.102642
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.102382
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0975992
KRT17 keratin 17, type I -0.0885266
LAMB3 laminin, beta 3 -0.086996
IFIH1 interferon induced with helicase C domain 1 -0.086473
SVIL supervillin -0.0851224
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0820695
F3 coagulation factor III (thromboplastin, tissue factor) -0.081001
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0793143
IGF1R insulin-like growth factor 1 receptor -0.078496
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0778508
TJP1 tight junction protein 1 -0.0743497
SAMD4A sterile alpha motif domain containing 4A -0.0737804
CEMIP cell migration inducing protein, hyaluronan binding -0.0717138
MYO5B myosin VB -0.071531
JUP junction plakoglobin -0.0680606
ZC3H11A zinc finger CCCH-type containing 11A -0.0678167
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0674104
EZR ezrin -0.0669224
RAB8B RAB8B, member RAS oncogene family -0.0662769
DSPP dentin sialophosphoprotein -0.0660868
OGA O-GlcNAcase -0.065534
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0642075
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0634118
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0632988
UBC ubiquitin C -0.0626395
ERBIN erbb2 interacting protein -0.0625402
LIMCH1 LIM and calponin homology domains 1 -0.0624351
SQSTM1 sequestosome 1 -0.0615816
S100A10 S100 calcium binding protein A10 -0.0614815
ABHD17C abhydrolase domain containing 17C -0.0613857
KYNU kynureninase -0.0612464
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0575276
KDM5B lysine (K)-specific demethylase 5B -0.0558677
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0550333
FNIP1 folliculin interacting protein 1 -0.0546013
STC1 stanniocalcin 1 -0.0545233
MXD1 MAX dimerization protein 1 -0.0538505
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0526935
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0521178
ESYT2 extended synaptotagmin-like protein 2 -0.0519572
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0512283
NPTN neuroplastin -0.0460479
IGF2 insulin-like growth factor 2 -0.0453212
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0447691
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0445985
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0445867
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0439946
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0437571
TNIP1 TNFAIP3 interacting protein 1 -0.0426192
ZNF292 zinc finger protein 292 -0.0424383
NIPBL Nipped-B homolog (Drosophila) -0.0419013
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0418664
ZNF395 zinc finger protein 395 -0.0416208
AHNAK AHNAK nucleoprotein -0.0416192
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0412068
CHD1 chromodomain helicase DNA binding protein 1 -0.0408666
ZFAND3 zinc finger, AN1-type domain 3 -0.0407507
UBE2G1 ubiquitin-conjugating enzyme E2G 1 -0.0405278
H3-3B H3.3 histone B -0.0401014
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0394566
ATOSA atos homolog A -0.0393537
ATXN1 ataxin 1 -0.038495
ELL2 elongation factor, RNA polymerase II, 2 -0.0380946
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0373069
FOXO3 forkhead box O3 -0.037011
SMOC1 SPARC related modular calcium binding 1 -0.0366853
NAV2 neuron navigator 2 -0.0351424
FNDC3A fibronectin type III domain containing 3A -0.034973
LCORL ligand dependent nuclear receptor corepressor-like -0.0345303
PTPRM protein tyrosine phosphatase, receptor type, M -0.0340784
BZW1 basic leucine zipper and W2 domains 1 -0.0339535
MED13 mediator complex subunit 13 -0.0339002
OSMR oncostatin M receptor -0.0330231
RBM47 RNA binding motif protein 47 -0.0328939
BMAL2 basic helix-loop-helix ARNT like 2 -0.0326968
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0325011
ANKRD12 ankyrin repeat domain 12 -0.0323384
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0317747
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0310831
PERP PERP, TP53 apoptosis effector -0.0310006
SETD2 SET domain containing 2 -0.0306456
ARHGAP26 Rho GTPase activating protein 26 -0.0305727
LMO7 LIM domain 7 -0.030223
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0296877
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0296574
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0294888
SSBP2 single-stranded DNA binding protein 2 -0.0290467
FMNL2 formin-like 2 -0.0286064
RASA2 RAS p21 protein activator 2 -0.028345
LDHA lactate dehydrogenase A -0.0281015
DSCAM Down syndrome cell adhesion molecule -0.027283