Homocysteine levels Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A homocysteine measurement is the quantification of homocsyteine in blood or urine and is used in the diagnosis of B12 and/or folate deficiency, and as part of a cardiac risk assessment. (Experimental Factor Ontology, EFO_0004578)
External Link https://www.ebi.ac.uk/gwas/search?query=Homocysteine levels
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11 genes associated with the Homocysteine levels phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
MTHFR methylenetetrahydrofolate reductase (NAD(P)H) 1.91561
CPS1 carbamoyl-phosphate synthase 1, mitochondrial 1.22115
CBS cystathionine-beta-synthase 1.15448
NOX4 NADPH oxidase 4 1.04952
FANCA Fanconi anemia, complementation group A 0.598838
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.572839
TRDMT1 tRNA aspartic acid methyltransferase 1 0.530146
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.530146
PRDX1 peroxiredoxin 1 0.499091
SLC17A3 solute carrier family 17 (organic anion transporter), member 3 0.434785
GTPBP10 GTP-binding protein 10 (putative) 0.405958