Homoharringtonine_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNIP thioredoxin interacting protein 0.0904708
SAMD4A sterile alpha motif domain containing 4A 0.0731606
EXT1 exostosin glycosyltransferase 1 0.0653048
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0621398
INTS6 integrator complex subunit 6 0.0495298
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0481279
SQSTM1 sequestosome 1 0.0465315
KLF6 Kruppel-like factor 6 0.0440343
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0415549
BIRC3 baculoviral IAP repeat containing 3 0.0371261
FOXO3 forkhead box O3 0.0349795
LPP LIM domain containing preferred translocation partner in lipoma 0.0346663
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0326384
SOX4 SRY (sex determining region Y)-box 4 0.0323525
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0319987
EZR ezrin 0.0312336
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0308512
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.030746
KLF10 Kruppel-like factor 10 0.0300968
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0296988
H1-0 H1.0 linker histone 0.0282091
TRPS1 trichorhinophalangeal syndrome I 0.0274744
TSC22D1 TSC22 domain family, member 1 0.0273586
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0273453
ZBTB20 zinc finger and BTB domain containing 20 0.0251261
JUN jun proto-oncogene 0.0249879
ATF4 activating transcription factor 4 0.0244158
MYOF myoferlin 0.0237649
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 0.0226716
NABP1 nucleic acid binding protein 1 0.0224341
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0222168
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.022192
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0220147
PCNX2 pecanex 2 0.0216543
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0213618
DST dystonin 0.0208293
TPT1 tumor protein, translationally-controlled 1 0.0206949
KLF5 Kruppel-like factor 5 (intestinal) 0.0206672
RUNX1 runt-related transcription factor 1 0.0205653
RESF1 retroelement silencing factor 1 0.0203965
CCND1 cyclin D1 0.0203377
RASEF RAS and EF-hand domain containing 0.0200335
PPP1R9A protein phosphatase 1, regulatory subunit 9A 0.0199828
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0195903
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0194148
H3-3B H3.3 histone B 0.0193197
PLK2 polo-like kinase 2 0.0189825
RIGI RNA sensor RIG-I 0.0188423
BMAL2 basic helix-loop-helix ARNT like 2 0.0187917
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.018691
OGA O-GlcNAcase 0.0184941
KRT18 keratin 18, type I 0.0184484
LMNA lamin A/C 0.0183132
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0180929
BAZ2B bromodomain adjacent to zinc finger domain, 2B 0.0176397
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0174518
ADGRV1 adhesion G protein-coupled receptor V1 0.0172141
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0171243
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0171002
HOMER1 homer scaffolding protein 1 0.0170056
ERRFI1 ERBB receptor feedback inhibitor 1 0.0169956
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0169823
RPL35A ribosomal protein L35a 0.0168534
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.0168259
ZSWIM6 zinc finger, SWIM-type containing 6 0.0167784
GRB10 growth factor receptor-bound protein 10 0.0167706
DSPP dentin sialophosphoprotein 0.0167069
ARRDC4 arrestin domain containing 4 0.0164512
SHTN1 shootin 1 0.0163671
BRD2 bromodomain containing 2 0.0163379
RSL1D1 ribosomal L1 domain containing 1 0.0162385
SFPQ splicing factor proline/glutamine-rich 0.0160222
ADM adrenomedullin 0.0160093
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0155847
TRIO trio Rho guanine nucleotide exchange factor 0.0154888
DAAM1 dishevelled associated activator of morphogenesis 1 0.0152675
SATB2 SATB homeobox 2 0.0151435
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0150649
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0148751
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0148664
RPL9 ribosomal protein L9 0.0144859
BHLHE40 basic helix-loop-helix family, member e40 0.0144778
RYBP RING1 and YY1 binding protein 0.0144247
KITLG KIT ligand 0.014328
DNAH14 dynein, axonemal, heavy chain 14 0.0141827
BTG1 B-cell translocation gene 1, anti-proliferative 0.0140455
ZNF638 zinc finger protein 638 0.0138548
DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 0.0137468
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0137275
FER fer (fps/fes related) tyrosine kinase 0.013693
RPS27L ribosomal protein S27-like 0.0136828
CAMKMT calmodulin-lysine N-methyltransferase 0.0136388
PNRC1 proline-rich nuclear receptor coactivator 1 0.0135407
LAMA4 laminin, alpha 4 0.0134808
SON SON DNA binding protein 0.013468
KIAA1217 KIAA1217 0.0133224
NRIP1 nuclear receptor interacting protein 1 0.013322
SERTAD2 SERTA domain containing 2 0.013188
AHNAK AHNAK nucleoprotein 0.0131625
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.013092

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.151952
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.126399
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.103701
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0953679
FAT1 FAT atypical cadherin 1 -0.0896564
GMDS GDP-mannose 4,6-dehydratase -0.0874482
PTMA prothymosin, alpha -0.0854478
CEMIP cell migration inducing protein, hyaluronan binding -0.0844115
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0779644
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0779465
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0719271
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0705719
IFIH1 interferon induced with helicase C domain 1 -0.0628177
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.061119
NPSR1 neuropeptide S receptor 1 -0.0601385
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0576716
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0551209
TNS4 tensin 4 -0.052072
GOLGA4 golgin A4 -0.0520613
CADPS Ca++-dependent secretion activator -0.0472598
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0472448
FLNB filamin B, beta -0.0455037
MYO1E myosin IE -0.0430678
PRELID2 PRELI domain containing 2 -0.0414338
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0411536
MLEC malectin -0.0407216
RNF145 ring finger protein 145 -0.0402963
PIGR polymeric immunoglobulin receptor -0.0375093
ANTXR2 anthrax toxin receptor 2 -0.0374903
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.037427
TRIM2 tripartite motif containing 2 -0.0372725
ZFAND3 zinc finger, AN1-type domain 3 -0.0370438
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0361675
CD46 CD46 molecule, complement regulatory protein -0.0351448
PPARG peroxisome proliferator-activated receptor gamma -0.033511
FTH1 ferritin, heavy polypeptide 1 -0.0334306
IARS1 isoleucyl-tRNA synthetase 1 -0.0333638
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.031778
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0316203
NDRG1 N-myc downstream regulated 1 -0.0311077
ANKRD11 ankyrin repeat domain 11 -0.0302431
ANKRD17 ankyrin repeat domain 17 -0.0301808
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.029698
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0295898
LOC112694756 uncharaterized LOC112694756 -0.0294908
ITGA6 integrin, alpha 6 -0.0293936
VMP1 vacuole membrane protein 1 -0.029162
NALF1 NALCN channel auxiliary factor 1 -0.0291098
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0290879
BTBD9 BTB (POZ) domain containing 9 -0.0288267
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0283679
CCNY cyclin Y -0.0281671
PKP2 plakophilin 2 -0.0280182
PTPRR protein tyrosine phosphatase, receptor type, R -0.0276432
COG5 component of oligomeric golgi complex 5 -0.0273814
MBNL2 muscleblind-like splicing regulator 2 -0.0272697
SETD5 SET domain containing 5 -0.0271389
CLTC clathrin, heavy chain (Hc) -0.027117
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0270489
PATJ PATJ crumbs cell polarity complex component -0.0266951
GREB1L growth regulation by estrogen in breast cancer-like -0.0262262
ESRP1 epithelial splicing regulatory protein 1 -0.0261759
RNF43 ring finger protein 43 -0.0260754
PRSS3 protease, serine, 3 -0.0260058
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0258196
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0257898
ACTN4 actinin, alpha 4 -0.0257715
PKM pyruvate kinase, muscle -0.0256136
PDIA3 protein disulfide isomerase family A, member 3 -0.0255907
HDLBP high density lipoprotein binding protein -0.0255441
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0250337
FNDC3B fibronectin type III domain containing 3B -0.0247127
NCOR1 nuclear receptor corepressor 1 -0.0245707
UBE2H ubiquitin-conjugating enzyme E2H -0.0243418
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0241567
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0240417
ESYT2 extended synaptotagmin-like protein 2 -0.0238849
EGR1 early growth response 1 -0.0237846
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0237781
PDLIM5 PDZ and LIM domain 5 -0.0236552
RBM39 RNA binding motif protein 39 -0.023578
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0234467
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0233766
TPD52 tumor protein D52 -0.0233668
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0230636
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0228909
ARHGAP32 Rho GTPase activating protein 32 -0.0228705
TTC3 tetratricopeptide repeat domain 3 -0.0227353
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0226402
GARS1 glycyl-tRNA synthetase 1 -0.0225646
CANX calnexin -0.0222833
MAP4 microtubule-associated protein 4 -0.0219957
CDK13 cyclin-dependent kinase 13 -0.0218292
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0216589
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0215733
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.021534
ABHD2 abhydrolase domain containing 2 -0.0215293
SEC24D SEC24 family member D -0.021501
PTPRB protein tyrosine phosphatase, receptor type, B -0.0213666
POF1B premature ovarian failure, 1B -0.0213397