Homoharringtonine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
BIRC3 baculoviral IAP repeat containing 3 0.300932
HDAC9 histone deacetylase 9 0.225102
DST dystonin 0.11122
TXNRD1 thioredoxin reductase 1 0.103797
KLF6 Kruppel-like factor 6 0.0933809
ERRFI1 ERBB receptor feedback inhibitor 1 0.0906626
SQSTM1 sequestosome 1 0.0812418
MT2A metallothionein 2A 0.0733418
HOMER1 homer scaffolding protein 1 0.0718757
JUN jun proto-oncogene 0.0703868
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0700914
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0692943
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0670842
SAMD4A sterile alpha motif domain containing 4A 0.0659856
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0654661
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0630583
ENO1 enolase 1, (alpha) 0.0618197
CXCL8 chemokine (C-X-C motif) ligand 8 0.0610007
EGFR epidermal growth factor receptor 0.0580712
RIGI RNA sensor RIG-I 0.056148
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0561387
FOSL1 FOS-like antigen 1 0.0547504
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0516492
MT1E metallothionein 1E 0.0515929
PLK2 polo-like kinase 2 0.0495281
IFIH1 interferon induced with helicase C domain 1 0.0487733
BRD2 bromodomain containing 2 0.0487105
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.0483631
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0461949
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0443146
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0428977
ADM adrenomedullin 0.0409567
RSAD2 radical S-adenosyl methionine domain containing 2 0.0404464
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.04036
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0376593
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0368126
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.036756
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0353528
KTN1 kinectin 1 (kinesin receptor) 0.0337711
TRAF1 TNF receptor-associated factor 1 0.0337547
KRT18 keratin 18, type I 0.0332674
TASOR2 transcription activation suppressor family member 2 0.0331591
ZNF217 zinc finger protein 217 0.0324741
CAMTA1 calmodulin binding transcription activator 1 0.032426
SOX9 SRY (sex determining region Y)-box 9 0.0320193
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0317822
MCTP1 multiple C2 domains, transmembrane 1 0.030088
ISG15 ISG15 ubiquitin-like modifier 0.0299095
GLS2 glutaminase 2 (liver, mitochondrial) 0.0294674
PRRC2C proline-rich coiled-coil 2C 0.0294443
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0292395
TSC22D2 TSC22 domain family, member 2 0.0284096
LYST lysosomal trafficking regulator 0.0283718
NOCT nocturnin 0.0270455
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0262587
TXNIP thioredoxin interacting protein 0.0259959
ZSWIM6 zinc finger, SWIM-type containing 6 0.0248995
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.024727
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0246634
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0246421
GPC5 glypican 5 0.0246398
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0246278
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0242055
TRIM56 tripartite motif containing 56 0.0241924
RPS6 ribosomal protein S6 0.0241402
AHNAK AHNAK nucleoprotein 0.0236864
CREB5 cAMP responsive element binding protein 5 0.0234931
CDV3 CDV3 homolog (mouse) 0.0233168
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0231841
SP100 SP100 nuclear antigen 0.0231144
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0230606
RPL37A ribosomal protein L37a 0.0226721
ARHGAP29 Rho GTPase activating protein 29 0.0221351
FAT1 FAT atypical cadherin 1 0.0219867
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide 0.0219668
EXT1 exostosin glycosyltransferase 1 0.0216207
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0215904
ATF4 activating transcription factor 4 0.0214642
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0213156
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0208422
TFRC transferrin receptor 0.0204848
HILPDA hypoxia inducible lipid droplet-associated 0.0204533
DENND4A DENN/MADD domain containing 4A 0.0200247
SPAG9 sperm associated antigen 9 0.0200095
TGM2 transglutaminase 2 0.0199581
RAB7A RAB7A, member RAS oncogene family 0.0198141
DEPP1 DEPP autophagy regulator 1 0.0198009
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0197262
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0195954
SFPQ splicing factor proline/glutamine-rich 0.01936
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0190271
CXCL5 chemokine (C-X-C motif) ligand 5 0.0189825
DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 0.0189743
LDHA lactate dehydrogenase A 0.0188728
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0188419
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0188312
SOD2 superoxide dismutase 2, mitochondrial 0.0184016
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1 0.0183399
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0182718
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0182113

decreased expression

Symbol Name Standardized Value
PSD3 pleckstrin and Sec7 domain containing 3 -0.197998
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.120009
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.108191
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.105824
TP63 tumor protein p63 -0.103568
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0982344
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0979549
DLG1 discs, large homolog 1 (Drosophila) -0.0905659
CD44 CD44 molecule (Indian blood group) -0.0847001
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0767276
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0750267
TM4SF1 transmembrane 4 L six family member 1 -0.0735741
PTMA prothymosin, alpha -0.0707359
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0693755
EHBP1 EH domain binding protein 1 -0.0673131
ZMYND8 zinc finger, MYND-type containing 8 -0.0666986
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0661269
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0658159
TSC22D1 TSC22 domain family, member 1 -0.0605715
EXOC4 exocyst complex component 4 -0.0543546
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0537639
SLC38A2 solute carrier family 38, member 2 -0.0533354
RAD51B RAD51 paralog B -0.0532417
ARHGAP5 Rho GTPase activating protein 5 -0.0527106
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0520196
SMYD3 SET and MYND domain containing 3 -0.0505516
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0499314
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0488082
TMSB10 thymosin beta 10 -0.0452878
RAI1 retinoic acid induced 1 -0.0451737
PTK2 protein tyrosine kinase 2 -0.0412225
FMNL2 formin-like 2 -0.0406115
GADD45A growth arrest and DNA-damage-inducible, alpha -0.038334
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0381388
TNS3 tensin 3 -0.0375633
BABAM2 BRISC and BRCA1 A complex member 2 -0.0375131
TMSB4X thymosin beta 4, X-linked -0.0374988
TOP1 topoisomerase (DNA) I -0.0371635
VIM vimentin -0.0370847
SBF2 SET binding factor 2 -0.0369303
ANKRD11 ankyrin repeat domain 11 -0.036519
DNER delta/notch-like EGF repeat containing -0.0365153
LOXL2 lysyl oxidase-like 2 -0.0364443
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0361807
ACTG1 actin gamma 1 -0.0360725
CMIP c-Maf inducing protein -0.0359056
TAS2R14 taste receptor, type 2, member 14 -0.0356949
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0356608
CAPRIN2 caprin family member 2 -0.0353597
SPIDR scaffolding protein involved in DNA repair -0.0352681
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0352297
FBXO11 F-box protein 11 -0.0349435
CENPF centromere protein F, 350/400kDa -0.0348745
BMERB1 bMERB domain containing 1 -0.0338835
ANKRD12 ankyrin repeat domain 12 -0.033806
CANX calnexin -0.0335402
THSD4 thrombospondin, type I, domain containing 4 -0.0334492
APP amyloid beta (A4) precursor protein -0.0333642
CEP170 centrosomal protein 170kDa -0.033242
WWTR1 WW domain containing transcription regulator 1 -0.0330176
RUNX1 runt-related transcription factor 1 -0.0330003
SRPK2 SRSF protein kinase 2 -0.0326131
UBE2E3 ubiquitin-conjugating enzyme E2E 3 -0.0325884
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0325858
VCL vinculin -0.032399
TMEM41B transmembrane protein 41B -0.0323472
BIRC6 baculoviral IAP repeat containing 6 -0.0323297
WARS1 tryptophanyl-tRNA synthetase 1 -0.0318537
PNISR PNN-interacting serine/arginine-rich protein -0.031669
LPP LIM domain containing preferred translocation partner in lipoma -0.0313923
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0313872
USP34 ubiquitin specific peptidase 34 -0.0313727
MBNL2 muscleblind-like splicing regulator 2 -0.0311475
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0311226
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0309926
GARS1 glycyl-tRNA synthetase 1 -0.0307222
HPCAL1 hippocalcin-like 1 -0.0305995
BCAR3 breast cancer anti-estrogen resistance 3 -0.0305785
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0305185
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0304367
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0303977
TTC28 tetratricopeptide repeat domain 28 -0.0301707
ADAM10 ADAM metallopeptidase domain 10 -0.0299518
IGF1R insulin-like growth factor 1 receptor -0.0298668
RTTN rotatin -0.0297644
DOCK11 dedicator of cytokinesis 11 -0.029733
RAB27B RAB27B, member RAS oncogene family -0.0297029
RSRC1 arginine/serine-rich coiled-coil 1 -0.0294809
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0292383
EFNA5 ephrin-A5 -0.0292167
TRIP12 thyroid hormone receptor interactor 12 -0.0291436
SMC4 structural maintenance of chromosomes 4 -0.0290459
SDCCAG8 serologically defined colon cancer antigen 8 -0.0289674
RTN4 reticulon 4 -0.0289044
ADAM17 ADAM metallopeptidase domain 17 -0.0288661
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0286832
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0283062
COG5 component of oligomeric golgi complex 5 -0.0282727
KMT2E lysine (K)-specific methyltransferase 2E -0.028245
MBD5 methyl-CpG binding domain protein 5 -0.0282336