Homoharringtonine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.17879
TXNRD1 thioredoxin reductase 1 0.157679
CXCL8 chemokine (C-X-C motif) ligand 8 0.132139
MCL1 myeloid cell leukemia 1 0.120095
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.109397
EIF1 eukaryotic translation initiation factor 1 0.108743
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.09688
HDAC9 histone deacetylase 9 0.0886183
BIRC3 baculoviral IAP repeat containing 3 0.0845455
PDE4D phosphodiesterase 4D, cAMP-specific 0.0814981
BASP1 brain abundant, membrane attached signal protein 1 0.0790922
AHNAK AHNAK nucleoprotein 0.0755905
MT2A metallothionein 2A 0.074387
RPL23 ribosomal protein L23 0.0740769
TPM3 tropomyosin 3 0.0729353
TRIO trio Rho guanine nucleotide exchange factor 0.0652135
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0624932
SAMD4A sterile alpha motif domain containing 4A 0.0624518
CCL5 chemokine (C-C motif) ligand 5 0.0621883
SQSTM1 sequestosome 1 0.060012
GRAMD1B GRAM domain containing 1B 0.0599733
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0586104
TM4SF1 transmembrane 4 L six family member 1 0.0551591
ENO1 enolase 1, (alpha) 0.0548052
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0543334
ADM adrenomedullin 0.0542694
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0538672
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0523517
ERRFI1 ERBB receptor feedback inhibitor 1 0.0522355
BRD2 bromodomain containing 2 0.0508731
KTN1 kinectin 1 (kinesin receptor) 0.0487027
BTG1 B-cell translocation gene 1, anti-proliferative 0.0485788
SLC30A1 solute carrier family 30 (zinc transporter), member 1 0.0475628
H3-3B H3.3 histone B 0.0470798
ATF4 activating transcription factor 4 0.0466819
DHRS7 dehydrogenase/reductase (SDR family) member 7 0.0438461
SLC39A10 solute carrier family 39 (zinc transporter), member 10 0.0435747
PKM pyruvate kinase, muscle 0.0416995
WAC WW domain containing adaptor with coiled-coil 0.0414464
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0387696
PRRC2C proline-rich coiled-coil 2C 0.0387103
RPS8 ribosomal protein S8 0.0385806
HLA-A major histocompatibility complex, class I, A 0.0381585
RPL7 ribosomal protein L7 0.038057
CFLAR CASP8 and FADD-like apoptosis regulator 0.0380146
KIF5B kinesin family member 5B 0.0376615
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0374524
SFPQ splicing factor proline/glutamine-rich 0.0367667
PM20D1 peptidase M20 domain containing 1 0.0359929
RPS17 ribosomal protein S17 0.0355239
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0354845
STC1 stanniocalcin 1 0.0353177
ZSWIM6 zinc finger, SWIM-type containing 6 0.0346285
RPL37A ribosomal protein L37a 0.0340436
MED13 mediator complex subunit 13 0.033173
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0331371
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.032991
S100A11 S100 calcium binding protein A11 0.0328748
ZC3H11A zinc finger CCCH-type containing 11A 0.0322635
FAM107B family with sequence similarity 107, member B 0.032251
MARCHF4 membrane associated ring-CH-type finger 4 0.031774
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0314179
CLU clusterin 0.0312761
RPS6 ribosomal protein S6 0.0309359
SEPTIN7 septin 7 0.0308458
FTL ferritin, light polypeptide 0.03078
DST dystonin 0.0307063
MSN moesin 0.0306308
H1-0 H1.0 linker histone 0.030473
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0302385
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0302169
CYLD cylindromatosis (turban tumor syndrome) 0.0302077
AFF4 AF4/FMR2 family, member 4 0.029668
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0292152
RSPO3 R-spondin 3 0.0289883
SOD2 superoxide dismutase 2, mitochondrial 0.0288749
GLS2 glutaminase 2 (liver, mitochondrial) 0.0280869
S100A9 S100 calcium binding protein A9 0.0278349
GABARAPL1 GABA(A) receptor-associated protein like 1 0.0275875
PGK1 phosphoglycerate kinase 1 0.0269812
PFN1 profilin 1 0.0265985
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0264251
SEC62 SEC62 homolog (S. cerevisiae) 0.0263632
RAN RAN, member RAS oncogene family 0.0263434
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0261832
PFDN2 prefoldin subunit 2 0.0260486
CHD4 chromodomain helicase DNA binding protein 4 0.0259986
RPLP1 ribosomal protein, large, P1 0.0259294
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0259026
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 0.0258999
GPATCH2L G patch domain containing 2-like 0.0258709
TPI1 triosephosphate isomerase 1 0.0257217
IER3 immediate early response 3 0.0256845
FOSL1 FOS-like antigen 1 0.0256431
RAP1GAP2 RAP1 GTPase activating protein 2 0.0254937
S100A6 S100 calcium binding protein A6 0.0253713
FOXO3 forkhead box O3 0.0252296
HLA-B major histocompatibility complex, class I, B 0.0251375
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0250626
FNIP1 folliculin interacting protein 1 0.0248097

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.115737
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0910137
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0741862
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0679831
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0670264
IGF2 insulin-like growth factor 2 -0.0587426
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0568277
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0527244
BICC1 BicC family RNA binding protein 1 -0.0488705
FTH1 ferritin, heavy polypeptide 1 -0.0484271
UBASH3B ubiquitin associated and SH3 domain containing B -0.0471763
P4HB prolyl 4-hydroxylase, beta polypeptide -0.046908
PYGL phosphorylase, glycogen, liver -0.0430162
CALU calumenin -0.0426213
EFNA5 ephrin-A5 -0.0409358
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0407247
JUN jun proto-oncogene -0.0401343
YME1L1 YME1-like 1 ATPase -0.0398843
NHSL1 NHS-like 1 -0.0394981
GLIS3 GLIS family zinc finger 3 -0.0393362
VIM vimentin -0.0390386
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.038997
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0383255
TFPI2 tissue factor pathway inhibitor 2 -0.0377522
NEBL nebulette -0.0376451
TPD52 tumor protein D52 -0.036846
PDIA6 protein disulfide isomerase family A, member 6 -0.036287
COPA coatomer protein complex, subunit alpha -0.0361107
FGB fibrinogen beta chain -0.0359191
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0350349
PDE8A phosphodiesterase 8A -0.0344924
TTC3 tetratricopeptide repeat domain 3 -0.0341904
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0337338
VMP1 vacuole membrane protein 1 -0.0325191
MT1X metallothionein 1X -0.0324118
ANKRD28 ankyrin repeat domain 28 -0.0313501
PRR16 proline rich 16 -0.0308783
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0306893
SEC31A SEC31 homolog A (S. cerevisiae) -0.0306327
COG5 component of oligomeric golgi complex 5 -0.0304649
ZFAND3 zinc finger, AN1-type domain 3 -0.0290356
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0287941
EHBP1 EH domain binding protein 1 -0.0285795
MKI67 marker of proliferation Ki-67 -0.0281121
PDLIM5 PDZ and LIM domain 5 -0.0279084
GLG1 golgi glycoprotein 1 -0.0272256
LMAN1 lectin, mannose-binding, 1 -0.0268326
RTN4 reticulon 4 -0.0264989
UTRN utrophin -0.0263408
CYRIB CYFIP related Rac1 interactor B -0.0261588
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0258344
ZNF292 zinc finger protein 292 -0.0257895
TMEM131 transmembrane protein 131 -0.0254733
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0252182
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.024837
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.024749
ASPH aspartate beta-hydroxylase -0.0247473
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0247118
APP amyloid beta (A4) precursor protein -0.0246189
GOLT1B golgi transport 1B -0.0242989
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0242549
PDIA3 protein disulfide isomerase family A, member 3 -0.024237
OSMR oncostatin M receptor -0.0240513
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0239084
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0237946
DPYSL2 dihydropyrimidinase-like 2 -0.0233718
QKI QKI, KH domain containing, RNA binding -0.0233576
ADGRG6 adhesion G protein-coupled receptor G6 -0.0232699
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0230676
CNKSR3 CNKSR family member 3 -0.0230004
SEC24D SEC24 family member D -0.0229944
DOCK4 dedicator of cytokinesis 4 -0.0227279
ACTN1 actinin, alpha 1 -0.0226691
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0225385
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.022282
RPS2 ribosomal protein S2 -0.0221875
PRRC1 proline-rich coiled-coil 1 -0.0219263
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0218995
SEC24A SEC24 family member A -0.0218348
RAB1A RAB1A, member RAS oncogene family -0.0218128
GNAS GNAS complex locus -0.0217446
EGR1 early growth response 1 -0.0214338
CHN1 chimerin 1 -0.0214308
NCOA7 nuclear receptor coactivator 7 -0.0210688
GORASP2 golgi reassembly stacking protein 2, 55kDa -0.0208463
NFIA nuclear factor I/A -0.0207063
GADD45B growth arrest and DNA-damage-inducible, beta -0.0206286
FBXO11 F-box protein 11 -0.0206115
BMP5 bone morphogenetic protein 5 -0.0203493
UBE4B ubiquitination factor E4B -0.020329
FGA fibrinogen alpha chain -0.0200125
FAM168A family with sequence similarity 168, member A -0.019999
EPC1 enhancer of polycomb homolog 1 (Drosophila) -0.0199925
NEGR1 neuronal growth regulator 1 -0.0196853
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) -0.0196482
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0196416
LAPTM4A lysosomal protein transmembrane 4 alpha -0.0195928
RPN2 ribophorin II -0.019517
TMEM123 transmembrane protein 123 -0.0195151
SPIDR scaffolding protein involved in DNA repair -0.0194849