Homoharringtonine_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.131615
ERRFI1 ERBB receptor feedback inhibitor 1 0.0877466
TXNRD1 thioredoxin reductase 1 0.0841922
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.074618
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0717593
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0601088
TPM3 tropomyosin 3 0.0575196
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0561535
TRIO trio Rho guanine nucleotide exchange factor 0.050665
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0496966
DST dystonin 0.046606
BIRC3 baculoviral IAP repeat containing 3 0.0399699
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0356097
KTN1 kinectin 1 (kinesin receptor) 0.0355816
WWOX WW domain containing oxidoreductase 0.0345489
CALD1 caldesmon 1 0.0340423
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0337613
BRD2 bromodomain containing 2 0.0333976
MCL1 myeloid cell leukemia 1 0.0326262
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0323602
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0318246
AHNAK AHNAK nucleoprotein 0.0316887
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0309508
MYH9 myosin, heavy chain 9, non-muscle 0.0293925
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0284717
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0279403
AFF3 AF4/FMR2 family, member 3 0.0278345
BIRC2 baculoviral IAP repeat containing 2 0.0272586
EIF5B eukaryotic translation initiation factor 5B 0.0269955
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0261032
ZNF462 zinc finger protein 462 0.0254469
COL12A1 collagen, type XII, alpha 1 0.0254106
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.025078
UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) 0.0249105
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.0244473
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0243985
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0238517
SAMD4A sterile alpha motif domain containing 4A 0.0234553
FAT1 FAT atypical cadherin 1 0.0232477
FOSL1 FOS-like antigen 1 0.0231032
SQSTM1 sequestosome 1 0.0230323
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0218915
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.021324
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0212845
SVIL supervillin 0.0212175
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0208568
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0206854
PPME1 protein phosphatase methylesterase 1 0.0206825
PHACTR1 phosphatase and actin regulator 1 0.0203019
GLO1 glyoxalase I 0.0201379
GLS2 glutaminase 2 (liver, mitochondrial) 0.0197924
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.019729
WNK1 WNK lysine deficient protein kinase 1 0.0195783
PRELID2 PRELI domain containing 2 0.0192352
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 0.0192293
GPC5 glypican 5 0.0191653
DTNA dystrobrevin, alpha 0.0189325
MSH6 mutS homolog 6 0.0188657
PKM pyruvate kinase, muscle 0.0186687
FGFR1 fibroblast growth factor receptor 1 0.0184897
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0183157
PCLO piccolo presynaptic cytomatrix protein 0.0182024
NOTCH2 notch 2 0.0181543
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0181501
MARCHF4 membrane associated ring-CH-type finger 4 0.0181061
LRRC58 leucine rich repeat containing 58 0.0180414
BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 0.0178723
CORO1C coronin, actin binding protein, 1C 0.0177782
STYK1 serine/threonine/tyrosine kinase 1 0.0177733
LEKR1 leucine, glutamate and lysine rich 1 0.0175553
GPATCH4 G patch domain containing 4 0.0171803
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide 0.0171397
HOMER1 homer scaffolding protein 1 0.0170666
SNAP25 synaptosomal-associated protein, 25kDa 0.0169961
FHIT fragile histidine triad 0.0169958
ANO6 anoctamin 6 0.0169851
RAD51B RAD51 paralog B 0.0167623
RANBP2 RAN binding protein 2 0.0166807
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 0.0166377
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0163889
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.016338
CRYBG3 beta-gamma crystallin domain containing 3 0.0163287
SRPK1 SRSF protein kinase 1 0.0163101
ANXA5 annexin A5 0.0161018
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0159547
GPR50 G protein-coupled receptor 50 0.0158836
RIMOC1 RAB7A interacting MON1-CCZ1 complex subunit 1 0.0158037
HSPA4 heat shock 70kDa protein 4 0.0154853
CPNE1 copine I 0.0153545
CBX5 chromobox homolog 5 0.0153207
CEP250 centrosomal protein 250kDa 0.0152128
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0150163
KRT18 keratin 18, type I 0.014979
CDV3 CDV3 homolog (mouse) 0.0148885
MTIF2 mitochondrial translational initiation factor 2 0.0148849
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0148201
TRAF1 TNF receptor-associated factor 1 0.0146067
AEBP2 AE binding protein 2 0.014583
MYO6 myosin VI 0.0144291
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0143337

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.23857
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.127932
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.125306
CLIP1 CAP-GLY domain containing linker protein 1 -0.0844633
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0786755
TMSB10 thymosin beta 10 -0.0668555
THSD4 thrombospondin, type I, domain containing 4 -0.0666838
RBM39 RNA binding motif protein 39 -0.0659878
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0603716
TPT1 tumor protein, translationally-controlled 1 -0.0515224
GNAS GNAS complex locus -0.0509495
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0497389
SYNE1 spectrin repeat containing, nuclear envelope 1 -0.0473534
CSDE1 cold shock domain containing E1, RNA-binding -0.0462651
ZBTB20 zinc finger and BTB domain containing 20 -0.0456198
HMGA2 high mobility group AT-hook 2 -0.0437009
LOC102724023 ES1 protein homolog, mitochondrial -0.0436685
PTMA prothymosin, alpha -0.0433456
FBXO11 F-box protein 11 -0.0431101
TFPI2 tissue factor pathway inhibitor 2 -0.0419448
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0415877
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0410327
RPL12 ribosomal protein L12 -0.0394061
BICD1 bicaudal D homolog 1 (Drosophila) -0.0382191
EEF2 eukaryotic translation elongation factor 2 -0.0379335
TAS2R14 taste receptor, type 2, member 14 -0.0371405
MYL12B myosin, light chain 12B, regulatory -0.0369682
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0363425
PTPRF protein tyrosine phosphatase, receptor type, F -0.0358503
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0352028
LMAN1 lectin, mannose-binding, 1 -0.0351019
GATAD2B GATA zinc finger domain containing 2B -0.0349811
RPLP0 ribosomal protein, large, P0 -0.0348891
CAVIN1 caveolae associated protein 1 -0.0346724
NCOA7 nuclear receptor coactivator 7 -0.0346329
RACK1 receptor for activated C kinase 1 -0.034554
TMEM41B transmembrane protein 41B -0.0342584
LMNA lamin A/C -0.0341819
COPA coatomer protein complex, subunit alpha -0.0339856
EHBP1 EH domain binding protein 1 -0.0337537
RPL37 ribosomal protein L37 -0.0337426
GOLGA4 golgin A4 -0.0336144
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0335623
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0333384
PDIA4 protein disulfide isomerase family A, member 4 -0.032834
KDM3A lysine (K)-specific demethylase 3A -0.0323804
RPLP1 ribosomal protein, large, P1 -0.032031
ACTG1 actin gamma 1 -0.0316984
ANKRD12 ankyrin repeat domain 12 -0.0313883
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0309724
SMC4 structural maintenance of chromosomes 4 -0.0306567
GOLGB1 golgin B1 -0.0306271
PHIP pleckstrin homology domain interacting protein -0.0304865
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0303432
VIM vimentin -0.0300344
GRAMD1B GRAM domain containing 1B -0.0299426
KMT2C lysine (K)-specific methyltransferase 2C -0.0296115
NAP1L1 nucleosome assembly protein 1-like 1 -0.0290228
DENND5B DENN/MADD domain containing 5B -0.0287845
SBNO1 strawberry notch homolog 1 (Drosophila) -0.0286957
BCAS3 breast carcinoma amplified sequence 3 -0.0282649
PRPF38B pre-mRNA processing factor 38B -0.0280869
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0280576
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0278775
RPS8 ribosomal protein S8 -0.0278051
UBC ubiquitin C -0.0274006
TTC3 tetratricopeptide repeat domain 3 -0.0273863
ATXN2 ataxin 2 -0.0273015
VMP1 vacuole membrane protein 1 -0.0272369
ANKRD17 ankyrin repeat domain 17 -0.0263383
EGR1 early growth response 1 -0.0262127
NBEAL1 neurobeachin-like 1 -0.026163
SLC38A2 solute carrier family 38, member 2 -0.0260979
RPS27 ribosomal protein S27 -0.0259617
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0258118
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0257166
BPTF bromodomain PHD finger transcription factor -0.0255915
WASF2 WAS protein family, member 2 -0.0253549
RTN4 reticulon 4 -0.0252752
UBB ubiquitin B -0.0252316
RPL34 ribosomal protein L34 -0.0251831
FTL ferritin, light polypeptide -0.0249586
THOC2 THO complex 2 -0.024901
RPS3 ribosomal protein S3 -0.0248981
EPN2 epsin 2 -0.0248653
RSRC2 arginine/serine-rich coiled-coil 2 -0.0248479
SENP6 SUMO1/sentrin specific peptidase 6 -0.0247655
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0247544
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0247432
RPL32 ribosomal protein L32 -0.0243122
ZMYND8 zinc finger, MYND-type containing 8 -0.0242722
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0242325
RPS19 ribosomal protein S19 -0.0241642
TLN1 talin 1 -0.0240862
GARS1 glycyl-tRNA synthetase 1 -0.0239984
UBE2H ubiquitin-conjugating enzyme E2H -0.0239928
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0239108
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.023891
CALR calreticulin -0.0238089
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0237862