Homoharringtonine_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLCB4 phospholipase C, beta 4 0.173995
CREB5 cAMP responsive element binding protein 5 0.153328
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.126592
HDAC9 histone deacetylase 9 0.124546
TXNRD1 thioredoxin reductase 1 0.115566
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.115293
CXCL8 chemokine (C-X-C motif) ligand 8 0.113239
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.106522
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.105338
FNDC3A fibronectin type III domain containing 3A 0.0995236
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0903033
SPAG9 sperm associated antigen 9 0.0860552
RSAD2 radical S-adenosyl methionine domain containing 2 0.0847859
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0816808
RIGI RNA sensor RIG-I 0.0812074
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0778122
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0761732
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0746239
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0733999
FNIP1 folliculin interacting protein 1 0.0721662
UBAP2L ubiquitin associated protein 2-like 0.0706199
IFIH1 interferon induced with helicase C domain 1 0.0675681
SQSTM1 sequestosome 1 0.0640575
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.061276
INHBA inhibin, beta A 0.060841
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0596599
TPT1 tumor protein, translationally-controlled 1 0.0590706
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.0588995
OASL 2'-5'-oligoadenylate synthetase-like 0.054741
FOSL1 FOS-like antigen 1 0.0543669
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0541506
RGS2 regulator of G-protein signaling 2 0.0524958
NBEAL1 neurobeachin-like 1 0.0497709
RYR2 ryanodine receptor 2 (cardiac) 0.0496484
DMD dystrophin 0.0490206
JUN jun proto-oncogene 0.046788
FAT1 FAT atypical cadherin 1 0.0447341
KDM6B lysine (K)-specific demethylase 6B 0.044533
TM4SF1 transmembrane 4 L six family member 1 0.0425704
GCA grancalcin, EF-hand calcium binding protein 0.0423347
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0416557
MYO10 myosin X 0.0414229
NOCT nocturnin 0.0414151
ARHGAP26 Rho GTPase activating protein 26 0.0411105
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0408891
VIM vimentin 0.040227
TRIO trio Rho guanine nucleotide exchange factor 0.0400073
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0392683
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0386505
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0380953
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.03787
BTG1 B-cell translocation gene 1, anti-proliferative 0.0377104
LYST lysosomal trafficking regulator 0.0376396
KYNU kynureninase 0.0375925
AEBP2 AE binding protein 2 0.037193
ATF3 activating transcription factor 3 0.0371383
PLK2 polo-like kinase 2 0.0369014
RASAL2 RAS protein activator like 2 0.0362161
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0361052
TBXT T-box transcription factor T 0.0351255
RPL37A ribosomal protein L37a 0.0350355
MYPN myopalladin 0.0346226
ETV3 ets variant 3 0.0340607
AKAP12 A kinase (PRKA) anchor protein 12 0.0337385
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0336886
BIRC3 baculoviral IAP repeat containing 3 0.0336867
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0329702
CXCL2 chemokine (C-X-C motif) ligand 2 0.0328908
CLIP1 CAP-GLY domain containing linker protein 1 0.0321974
CAMTA1 calmodulin binding transcription activator 1 0.0321434
HOMER1 homer scaffolding protein 1 0.0317245
LSAMP limbic system-associated membrane protein 0.0316345
DUSP10 dual specificity phosphatase 10 0.0312384
NAV3 neuron navigator 3 0.0307099
RPL31 ribosomal protein L31 0.0298707
GLMN glomulin, FKBP associated protein 0.0296825
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0292001
SOCS3 suppressor of cytokine signaling 3 0.0291065
SAMD4A sterile alpha motif domain containing 4A 0.0289341
CTSL cathepsin L 0.0287201
STC1 stanniocalcin 1 0.0285146
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0285013
DNAH14 dynein, axonemal, heavy chain 14 0.0282697
RAB7A RAB7A, member RAS oncogene family 0.0277627
RHOB ras homolog family member B 0.027579
INTS6 integrator complex subunit 6 0.0275585
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0274028
IFI44 interferon-induced protein 44 0.0273436
BHLHE40 basic helix-loop-helix family, member e40 0.027319
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0271151
FOSL2 FOS-like antigen 2 0.0269595
ZNFX1 zinc finger, NFX1-type containing 1 0.0263882
RPLP1 ribosomal protein, large, P1 0.0261869
PER1 period circadian clock 1 0.026069
SOD2 superoxide dismutase 2, mitochondrial 0.0260643
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0259479
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.025947
ZFP36 ZFP36 ring finger protein 0.0257532
WARS1 tryptophanyl-tRNA synthetase 1 0.0256381
MAP7 microtubule-associated protein 7 0.0251266

decreased expression

Symbol Name Standardized Value
EFNA5 ephrin-A5 -0.277134
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.164111
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.138893
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.129435
PDE4D phosphodiesterase 4D, cAMP-specific -0.112254
NAMPT nicotinamide phosphoribosyltransferase -0.104072
ASPH aspartate beta-hydroxylase -0.0967099
LIMCH1 LIM and calponin homology domains 1 -0.0945378
MT2A metallothionein 2A -0.0929325
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0828179
PSD3 pleckstrin and Sec7 domain containing 3 -0.0752974
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0752868
FNDC3B fibronectin type III domain containing 3B -0.0676062
GDA guanine deaminase -0.0606056
NRCAM neuronal cell adhesion molecule -0.0575649
IGFBP3 insulin-like growth factor binding protein 3 -0.0567353
FN1 fibronectin 1 -0.0562818
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0520112
DOCK4 dedicator of cytokinesis 4 -0.0492505
COL5A2 collagen, type V, alpha 2 -0.0476566
NEK7 NIMA-related kinase 7 -0.0476302
GRAMD1B GRAM domain containing 1B -0.0460894
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0448894
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0447626
FLNB filamin B, beta -0.0437952
CANX calnexin -0.0437267
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0435795
NPAS2 neuronal PAS domain protein 2 -0.0432069
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.042417
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.041871
ELL2 elongation factor, RNA polymerase II, 2 -0.0411707
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0406814
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0354904
SMYD3 SET and MYND domain containing 3 -0.0352991
RBM39 RNA binding motif protein 39 -0.0349436
FAM13A family with sequence similarity 13, member A -0.0348929
PYGL phosphorylase, glycogen, liver -0.0346361
NDRG1 N-myc downstream regulated 1 -0.0342563
PCBP3 poly(rC) binding protein 3 -0.0332726
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0332349
RTN4 reticulon 4 -0.0331105
BIRC6 baculoviral IAP repeat containing 6 -0.0314491
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0311994
MFF mitochondrial fission factor -0.0310766
CARD16 caspase recruitment domain family, member 16 -0.0309068
COPA coatomer protein complex, subunit alpha -0.0302714
PDLIM5 PDZ and LIM domain 5 -0.0302225
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0300014
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0299985
PDE10A phosphodiesterase 10A -0.0299877
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.02943
NBAS neuroblastoma amplified sequence -0.0283039
CTSC cathepsin C -0.0281669
AGFG1 ArfGAP with FG repeats 1 -0.0277234
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0273173
ARID4B AT rich interactive domain 4B (RBP1-like) -0.026928
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0258027
PDIA3 protein disulfide isomerase family A, member 3 -0.0256495
TPD52 tumor protein D52 -0.0256483
COL8A1 collagen, type VIII, alpha 1 -0.0254844
LMAN1 lectin, mannose-binding, 1 -0.0253514
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0251672
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0251004
PDIA6 protein disulfide isomerase family A, member 6 -0.0247366
GPC6 glypican 6 -0.0244988
COG5 component of oligomeric golgi complex 5 -0.0242468
UBC ubiquitin C -0.0241419
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0236993
WDFY2 WD repeat and FYVE domain containing 2 -0.0236385
MAP1B microtubule-associated protein 1B -0.0235064
GARS1 glycyl-tRNA synthetase 1 -0.0230687
CENPF centromere protein F, 350/400kDa -0.0229654
CALU calumenin -0.0228069
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0227944
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0225698
HELZ helicase with zinc finger -0.0224093
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0223987
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0219769
MON2 MON2 homolog (S. cerevisiae) -0.0214892
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0213862
OSMR oncostatin M receptor -0.0213051
PHF21A PHD finger protein 21A -0.0211485
CD46 CD46 molecule, complement regulatory protein -0.0209117
IL1RAP interleukin 1 receptor accessory protein -0.0208066
AVL9 AVL9 homolog (S. cerevisiase) -0.0206888
PGK1 phosphoglycerate kinase 1 -0.0206372
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0205462
GLIS3 GLIS family zinc finger 3 -0.0204599
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0204437
PDGFA platelet-derived growth factor alpha polypeptide -0.0203844
ANXA1 annexin A1 -0.0202268
BRWD3 bromodomain and WD repeat domain containing 3 -0.0200735
ANKRD11 ankyrin repeat domain 11 -0.0198282
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0197478
MYOF myoferlin -0.0197091
TXNIP thioredoxin interacting protein -0.0196998
RTN1 reticulon 1 -0.0195098
BCAR3 breast cancer anti-estrogen resistance 3 -0.0193662
TNPO1 transportin 1 -0.01928
DIAPH2 diaphanous-related formin 2 -0.019273