Homoharringtonine_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PCLO piccolo presynaptic cytomatrix protein 0.12938
ANKRD33B ankyrin repeat domain 33B 0.0836268
ZFP30 ZFP30 zinc finger protein 0.0795654
DST dystonin 0.0744433
PHIP pleckstrin homology domain interacting protein 0.0689321
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0646803
ZNF217 zinc finger protein 217 0.0630756
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0619884
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0591303
XPO1 exportin 1 0.0557131
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.0552472
HDAC9 histone deacetylase 9 0.0547534
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0537629
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.053615
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.052964
UTRN utrophin 0.0515025
ZNF608 zinc finger protein 608 0.0496581
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0492585
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0482334
DSCAM Down syndrome cell adhesion molecule 0.0458744
GLS2 glutaminase 2 (liver, mitochondrial) 0.0454973
NFIB nuclear factor I/B 0.0439112
NHSL1 NHS-like 1 0.0432534
OGA O-GlcNAcase 0.0431622
PRRC2C proline-rich coiled-coil 2C 0.0426516
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.040336
CABLES1 Cdk5 and Abl enzyme substrate 1 0.0403196
PDE4D phosphodiesterase 4D, cAMP-specific 0.0381672
NSUN6 NOP2/Sun domain family, member 6 0.0377547
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.037513
SON SON DNA binding protein 0.0371081
NIPBL Nipped-B homolog (Drosophila) 0.0366788
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.03664
BIRC3 baculoviral IAP repeat containing 3 0.0364456
NFIA nuclear factor I/A 0.0363123
LRP12 low density lipoprotein receptor-related protein 12 0.0357144
BNC2 basonuclin 2 0.0356467
LOC102724023 ES1 protein homolog, mitochondrial 0.0353341
GPHN gephyrin 0.035322
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0351543
NPAS3 neuronal PAS domain protein 3 0.0350479
MEF2C myocyte enhancer factor 2C 0.0349252
ANKRD12 ankyrin repeat domain 12 0.0348336
HMGA2 high mobility group AT-hook 2 0.0347993
TSC22D2 TSC22 domain family, member 2 0.0336747
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0333628
ADGRG6 adhesion G protein-coupled receptor G6 0.0325911
SKIL SKI-like proto-oncogene 0.0325645
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0318003
TRIO trio Rho guanine nucleotide exchange factor 0.0316331
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0314561
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0311107
USP34 ubiquitin specific peptidase 34 0.0307334
CEP135 centrosomal protein 135kDa 0.0303566
PHF3 PHD finger protein 3 0.029934
NSD1 nuclear receptor binding SET domain protein 1 0.0298641
DMXL2 Dmx-like 2 0.0292618
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0291446
TRIP11 thyroid hormone receptor interactor 11 0.0290833
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0286636
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0284739
PARD3B par-3 family cell polarity regulator beta 0.0284414
UBN2 ubinuclein 2 0.0284366
ARHGAP24 Rho GTPase activating protein 24 0.0283194
SERBP1 SERPINE1 mRNA binding protein 1 0.0280398
JMJD1C jumonji domain containing 1C 0.0279082
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.0277569
USH2A Usher syndrome 2A (autosomal recessive, mild) 0.027593
ACIN1 apoptotic chromatin condensation inducer 1 0.0275761
ZSWIM6 zinc finger, SWIM-type containing 6 0.0274811
HSPA4L heat shock 70kDa protein 4-like 0.0270165
RB1CC1 RB1-inducible coiled-coil 1 0.0267758
FER fer (fps/fes related) tyrosine kinase 0.0266739
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0265071
ZNF638 zinc finger protein 638 0.0257763
MED13 mediator complex subunit 13 0.0250598
R3HDM2 R3H domain containing 2 0.0250537
YAP1 Yes-associated protein 1 0.0248739
ERRFI1 ERBB receptor feedback inhibitor 1 0.0247517
BPTF bromodomain PHD finger transcription factor 0.0247272
KMT2E lysine (K)-specific methyltransferase 2E 0.0246418
DNAH14 dynein, axonemal, heavy chain 14 0.0244163
CELF2 CUGBP, Elav-like family member 2 0.0243827
RICTOR RPTOR independent companion of MTOR, complex 2 0.0242453
COL4A5 collagen, type IV, alpha 5 0.0242159
SLC44A5 solute carrier family 44, member 5 0.0239146
PER1 period circadian clock 1 0.023845
MGA MGA, MAX dimerization protein 0.0236978
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.0236504
EXT1 exostosin glycosyltransferase 1 0.0235239
KMT2C lysine (K)-specific methyltransferase 2C 0.0235143
PHC3 polyhomeotic homolog 3 (Drosophila) 0.023513
SQSTM1 sequestosome 1 0.0235075
RREB1 ras responsive element binding protein 1 0.0234595
PHACTR4 phosphatase and actin regulator 4 0.0234523
SAMD4A sterile alpha motif domain containing 4A 0.0234168
REST RE1-silencing transcription factor 0.0233675
FCHSD2 FCH and double SH3 domains 2 0.0233145
CHD7 chromodomain helicase DNA binding protein 7 0.0232019
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 0.0231778

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.244325
GPC3 glypican 3 -0.123103
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.109692
COL11A1 collagen, type XI, alpha 1 -0.109161
VIM vimentin -0.0990854
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0926791
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0899945
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0884594
ZFAND3 zinc finger, AN1-type domain 3 -0.0828088
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.08165
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.076587
PCDH9 protocadherin 9 -0.0750396
COL1A2 collagen, type I, alpha 2 -0.072659
COL3A1 collagen, type III, alpha 1 -0.0693731
CENPE centromere protein E, 312kDa -0.0678605
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0672839
PTMA prothymosin, alpha -0.0672353
PEG10 paternally expressed 10 -0.0642694
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0621946
CALU calumenin -0.057697
GARS1 glycyl-tRNA synthetase 1 -0.0554727
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0538565
GNAS GNAS complex locus -0.0488713
NTM neurotrimin -0.0460279
TMSB10 thymosin beta 10 -0.0457564
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0452532
CALR calreticulin -0.0450628
STRN3 striatin, calmodulin binding protein 3 -0.0450404
RPS16 ribosomal protein S16 -0.0435303
ACTG1 actin gamma 1 -0.0433347
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.043013
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0421068
MRPS30 mitochondrial ribosomal protein S30 -0.0413631
CENPF centromere protein F, 350/400kDa -0.0408074
KCTD16 potassium channel tetramerization domain containing 16 -0.0407383
TPT1 tumor protein, translationally-controlled 1 -0.0403272
RAD21 RAD21 homolog (S. pombe) -0.0398843
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0395258
ADGRV1 adhesion G protein-coupled receptor V1 -0.039171
MAP4 microtubule-associated protein 4 -0.0382268
MT2A metallothionein 2A -0.0372165
SLC38A2 solute carrier family 38, member 2 -0.0362325
TARS1 threonyl-tRNA synthetase 1 -0.0361418
CDH19 cadherin 19, type 2 -0.0359414
RPLP0 ribosomal protein, large, P0 -0.0357951
PDIA6 protein disulfide isomerase family A, member 6 -0.0355832
RPS8 ribosomal protein S8 -0.0354887
PRELID2 PRELI domain containing 2 -0.035487
CXADR coxsackie virus and adenovirus receptor -0.035317
MDK midkine (neurite growth-promoting factor 2) -0.0343753
RAI1 retinoic acid induced 1 -0.0332185
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0332042
SLC38A1 solute carrier family 38, member 1 -0.0324231
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0324207
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0320534
KDM3A lysine (K)-specific demethylase 3A -0.0316859
SLIT2 slit homolog 2 (Drosophila) -0.0313369
CAMTA1 calmodulin binding transcription activator 1 -0.0312577
RFPL4B ret finger protein-like 4B -0.0312404
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0311052
FST follistatin -0.0308545
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0308527
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0306955
HMGB2 high mobility group box 2 -0.0303767
RTN4 reticulon 4 -0.0303318
ARF1 ADP-ribosylation factor 1 -0.0301239
KPNB1 karyopherin (importin) beta 1 -0.0299722
PBX3 pre-B-cell leukemia homeobox 3 -0.0292866
THBS1 thrombospondin 1 -0.029019
RAB2A RAB2A, member RAS oncogene family -0.0283572
TPX2 TPX2, microtubule-associated -0.0283127
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0282545
ARHGAP15 Rho GTPase activating protein 15 -0.0281295
MED12L mediator complex subunit 12-like -0.0277834
TMSB4X thymosin beta 4, X-linked -0.027504
COPB1 coatomer protein complex, subunit beta 1 -0.0274474
RAB1A RAB1A, member RAS oncogene family -0.0271409
MKI67 marker of proliferation Ki-67 -0.0269954
ZNF385D zinc finger protein 385D -0.0267125
URI1 URI1, prefoldin-like chaperone -0.0267036
RPL12 ribosomal protein L12 -0.0265775
ZMYND8 zinc finger, MYND-type containing 8 -0.0265247
LOC112694756 uncharaterized LOC112694756 -0.0262392
RPL4 ribosomal protein L4 -0.026236
IARS1 isoleucyl-tRNA synthetase 1 -0.0260227
QKI QKI, KH domain containing, RNA binding -0.0259716
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0259375
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0256248
RPS2 ribosomal protein S2 -0.0255937
PCDH17 protocadherin 17 -0.025496
SGO2 shugoshin 2 -0.025215
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0252118
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.025208
NCOR2 nuclear receptor corepressor 2 -0.0249425
ACBD3 acyl-CoA binding domain containing 3 -0.0247771
RPL11 ribosomal protein L11 -0.0246221
TUBB tubulin, beta class I -0.0245835
RPLP1 ribosomal protein, large, P1 -0.0245493
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0244372
EIF1 eukaryotic translation initiation factor 1 -0.0242716