Homoharringtonine_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Homoharringtonine perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Homoharringtonine_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ENO1 enolase 1, (alpha) 0.145211
HDAC9 histone deacetylase 9 0.134395
ERRFI1 ERBB receptor feedback inhibitor 1 0.0769301
ADM adrenomedullin 0.0701808
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0697291
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0683033
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0614841
IL6ST interleukin 6 signal transducer 0.0596572
AHR aryl hydrocarbon receptor 0.0552703
COL1A1 collagen, type I, alpha 1 0.0517539
EPS8 epidermal growth factor receptor pathway substrate 8 0.0485938
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0483298
ZNF395 zinc finger protein 395 0.0454281
DST dystonin 0.0433877
S100A9 S100 calcium binding protein A9 0.0426795
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0416285
HS3ST2 heparan sulfate (glucosamine) 3-O-sulfotransferase 2 0.0409786
TIMP3 TIMP metallopeptidase inhibitor 3 0.0408783
AFF4 AF4/FMR2 family, member 4 0.0404378
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.039192
ARRDC3 arrestin domain containing 3 0.038655
KYNU kynureninase 0.0385532
DSCAM Down syndrome cell adhesion molecule 0.0383195
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0379117
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0376285
CADM1 cell adhesion molecule 1 0.0366191
TMSB10 thymosin beta 10 0.0362637
ACTG1 actin gamma 1 0.0356727
AHRR aryl-hydrocarbon receptor repressor 0.0355434
SEPTIN7 septin 7 0.0347719
LAMB3 laminin, beta 3 0.0344329
FLNA filamin A, alpha 0.034383
CDK6 cyclin-dependent kinase 6 0.0339989
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0339148
PICALM phosphatidylinositol binding clathrin assembly protein 0.0335987
BTG1 B-cell translocation gene 1, anti-proliferative 0.0333847
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0322369
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0316468
DDIT4 DNA-damage-inducible transcript 4 0.0312996
EGR1 early growth response 1 0.0312225
RPL7 ribosomal protein L7 0.0305656
TET3 tet methylcytosine dioxygenase 3 0.0302639
THBS1 thrombospondin 1 0.0301303
KMT2E lysine (K)-specific methyltransferase 2E 0.0297592
KDM3B lysine (K)-specific demethylase 3B 0.0297472
RPL37A ribosomal protein L37a 0.0296958
KIDINS220 kinase D-interacting substrate, 220kDa 0.0296186
BBX bobby sox homolog (Drosophila) 0.0291825
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0290868
ARHGAP26 Rho GTPase activating protein 26 0.0290549
UVRAG UV radiation resistance associated 0.0288735
PPP4R4 protein phosphatase 4, regulatory subunit 4 0.0288692
ANGPTL4 angiopoietin-like 4 0.0284952
BHLHE40 basic helix-loop-helix family, member e40 0.0277823
PKM pyruvate kinase, muscle 0.0277271
PLCB4 phospholipase C, beta 4 0.0272713
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0272656
FMN1 formin 1 0.0272339
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0269881
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.0269194
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.026868
PHF21A PHD finger protein 21A 0.0267916
PATL2 protein associated with topoisomerase II homolog 2 (yeast) 0.0266916
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.0262863
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0262737
MT2A metallothionein 2A 0.0262525
CD83 CD83 molecule 0.0260637
ZNF638 zinc finger protein 638 0.0259296
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0259259
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.025895
CNOT4 CCR4-NOT transcription complex, subunit 4 0.0258905
ANKRD12 ankyrin repeat domain 12 0.0257323
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.025706
ATG10 autophagy related 10 0.0256887
LGALS1 lectin, galactoside-binding, soluble, 1 0.0256606
NPEPPS aminopeptidase puromycin sensitive 0.0256594
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0251364
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.024639
SEC61G Sec61 gamma subunit 0.024478
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0243677
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0238976
ERBIN erbb2 interacting protein 0.0238533
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0238116
DARS1 aspartyl-tRNA synthetase 1 0.0232702
LYST lysosomal trafficking regulator 0.0232215
TRAF3 TNF receptor-associated factor 3 0.0231519
TNRC6B trinucleotide repeat containing 6B 0.0230405
HOMER1 homer scaffolding protein 1 0.0229678
PGK1 phosphoglycerate kinase 1 0.0229574
CRYBG3 beta-gamma crystallin domain containing 3 0.0228471
LDHA lactate dehydrogenase A 0.0227934
FOSL1 FOS-like antigen 1 0.0227562
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0226865
NRDC nardilysin convertase 0.0226778
COL6A1 collagen, type VI, alpha 1 0.0225854
KDM4C lysine (K)-specific demethylase 4C 0.0225561
NAP1L1 nucleosome assembly protein 1-like 1 0.0225514
MEF2A myocyte enhancer factor 2A 0.0224243
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.0223895
AGO2 argonaute RISC catalytic component 2 0.0223465

decreased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 -0.215393
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.18279
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.162694
FN1 fibronectin 1 -0.146095
JUN jun proto-oncogene -0.121952
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0867728
SDC4 syndecan 4 -0.085906
IGFBP3 insulin-like growth factor binding protein 3 -0.0857155
TTC3 tetratricopeptide repeat domain 3 -0.0766208
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0729474
CALU calumenin -0.0712463
AKAP9 A kinase (PRKA) anchor protein 9 -0.0704521
SEC24D SEC24 family member D -0.0692986
SEC31A SEC31 homolog A (S. cerevisiae) -0.0680495
MAP1B microtubule-associated protein 1B -0.0668501
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0630972
COG5 component of oligomeric golgi complex 5 -0.0613206
PTGES2 prostaglandin E synthase 2 -0.0609951
HDLBP high density lipoprotein binding protein -0.059333
CXCL3 chemokine (C-X-C motif) ligand 3 -0.0589324
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0582179
INSIG1 insulin induced gene 1 -0.0561757
CANX calnexin -0.055547
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0535278
TRA2A transformer 2 alpha homolog (Drosophila) -0.0530544
PSD3 pleckstrin and Sec7 domain containing 3 -0.0529936
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0510159
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0504846
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0497967
FTH1 ferritin, heavy polypeptide 1 -0.0497201
CDK13 cyclin-dependent kinase 13 -0.0496778
COG6 component of oligomeric golgi complex 6 -0.0488483
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0482841
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0482401
LOXL2 lysyl oxidase-like 2 -0.0477462
CENPE centromere protein E, 312kDa -0.0470386
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0462635
RAB1A RAB1A, member RAS oncogene family -0.0455475
CDH13 cadherin 13 -0.0455228
TENT5A terminal nucleotidyltransferase 5A -0.0450158
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0442406
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0438329
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0421292
TOP1 topoisomerase (DNA) I -0.0409871
PDLIM5 PDZ and LIM domain 5 -0.0408583
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0402201
FNDC3B fibronectin type III domain containing 3B -0.0401548
LMAN1 lectin, mannose-binding, 1 -0.0392171
ITGAV integrin, alpha V -0.0390924
TPM4 tropomyosin 4 -0.0387605
RBM39 RNA binding motif protein 39 -0.0380638
DPYSL2 dihydropyrimidinase-like 2 -0.0379899
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0378084
PRRC1 proline-rich coiled-coil 1 -0.0377788
ZBTB20 zinc finger and BTB domain containing 20 -0.0376269
PDIA3 protein disulfide isomerase family A, member 3 -0.0372216
ATXN1 ataxin 1 -0.0364842
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0364094
TSC22D2 TSC22 domain family, member 2 -0.0363567
HMGA2 high mobility group AT-hook 2 -0.0361109
SOD2 superoxide dismutase 2, mitochondrial -0.0360007
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0358476
SUCO SUN domain containing ossification factor -0.0358285
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0356793
LOX lysyl oxidase -0.0353632
WASF2 WAS protein family, member 2 -0.0353608
SOX5 SRY (sex determining region Y)-box 5 -0.0346455
KIF4A kinesin family member 4A -0.033679
ASPH aspartate beta-hydroxylase -0.0336452
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0335383
NOP58 NOP58 ribonucleoprotein -0.0334263
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.0331989
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0331661
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0331615
CCNL1 cyclin L1 -0.0330718
ANKRD11 ankyrin repeat domain 11 -0.0329632
C1D C1D nuclear receptor corepressor -0.0325653
BIRC6 baculoviral IAP repeat containing 6 -0.0325093
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.03239
SRP54 signal recognition particle 54kDa -0.0323347
GLG1 golgi glycoprotein 1 -0.0322985
ANO6 anoctamin 6 -0.0321441
MON2 MON2 homolog (S. cerevisiae) -0.0317158
SFTPA2 surfactant protein A2 -0.0315421
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0312284
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0308988
AHCYL1 adenosylhomocysteinase-like 1 -0.0308259
RPN2 ribophorin II -0.0307362
PDIA5 protein disulfide isomerase family A, member 5 -0.030641
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0306308
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0306076
SMYD3 SET and MYND domain containing 3 -0.0304814
PDIA4 protein disulfide isomerase family A, member 4 -0.0304799
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0300079
SEC24A SEC24 family member A -0.0299389
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0296985
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0293124
GARS1 glycyl-tRNA synthetase 1 -0.0292817
MSN moesin -0.0292588
HM13 histocompatibility (minor) 13 -0.0292568