IPC-298 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Melanoma Tumour (Cell Model Passports, SIDM01059)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01059
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Genes

198 proteins associated with the cell line IPC-298 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
AFG3L2 AFG3-like AAA ATPase 2
AMDHD2 amidohydrolase domain containing 2
AMPD2 adenosine monophosphate deaminase 2
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
ATOX1 antioxidant 1 copper chaperone
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
AUP1 ancient ubiquitous protein 1
BTNL8 butyrophilin-like 8
CAND2 cullin-associated and neddylation-dissociated 2 (putative)
CASP1 caspase 1, apoptosis-related cysteine peptidase
CBR1 carbonyl reductase 1
CBR3 carbonyl reductase 3
CC2D1A coiled-coil and C2 domain containing 1A
CCDC124 coiled-coil domain containing 124
CCDC175 coiled-coil domain containing 175
CCDC33 coiled-coil domain containing 33
CD109 CD109 molecule
CDK13 cyclin-dependent kinase 13
CHD7 chromodomain helicase DNA binding protein 7
CIT citron rho-interacting serine/threonine kinase
CLCN3 chloride channel, voltage-sensitive 3
CLTCL1 clathrin, heavy chain-like 1
CSTB cystatin B (stefin B)
DNASE2 deoxyribonuclease II, lysosomal
EEA1 early endosome antigen 1
FKBP1A FK506 binding protein 1A, 12kDa
GIPC1 GIPC PDZ domain containing family, member 1
GOLGA3 golgin A3
GSN gelsolin
GSTO1 glutathione S-transferase omega 1
HGS hepatocyte growth factor-regulated tyrosine kinase substrate
HK2 hexokinase 2
HOOK3 hook microtubule-tethering protein 3
HS2ST1 heparan sulfate 2-O-sulfotransferase 1
ISLR2 immunoglobulin superfamily containing leucine-rich repeat 2
LGALS3 lectin, galactoside-binding, soluble, 3
LOC100653005
LOC105371637 uncharacterized LOC105371637
LOC105378547 uncharacterized LOC105378547
LRRC27 leucine rich repeat containing 27
LZTS1 leucine zipper, putative tumor suppressor 1
MAN2B1 mannosidase, alpha, class 2B, member 1
MAP1S microtubule-associated protein 1S
METTL2B methyltransferase like 2B
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MIS18A MIS18 kinetochore protein A
MMP27 matrix metallopeptidase 27
MUC20 mucin 20, cell surface associated
MYO5A myosin VA (heavy chain 12, myoxin)
MYO9B myosin IXB
NHSL1 NHS-like 1
PABPC1L poly(A) binding protein, cytoplasmic 1-like
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PEPD peptidase D
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
POSTN periostin, osteoblast specific factor
PPP1R12C protein phosphatase 1, regulatory subunit 12C
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PYGB phosphorylase, glycogen; brain
QDPR quinoid dihydropteridine reductase
RAB27A RAB27A, member RAS oncogene family
RAD23A RAD23 homolog A (S. cerevisiae)
RILPL1 Rab interacting lysosomal protein-like 1
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
RNF185 ring finger protein 185
SCAF1 SR-related CTD-associated factor 1
SDCBP syndecan binding protein (syntenin)
SKA3 spindle and kinetochore associated complex subunit 3
SMAD3 SMAD family member 3
SMS spermine synthase
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNX8 sorting nexin 8
SNX9 sorting nexin 9
SORT1 sortilin 1
SPAG9 sperm associated antigen 9
STX7 syntaxin 7
STXBP1 syntaxin binding protein 1
SZRD1 SUZ RNA binding domain containing 1
TENM3 teneurin transmembrane protein 3
TIMELESS timeless circadian clock
TYRP1 tyrosinase-related protein 1
UBAP2 ubiquitin associated protein 2
UBE2G2 ubiquitin-conjugating enzyme E2G 2
UBL7 ubiquitin-like 7
URM1 ubiquitin related modifier 1
USP19 ubiquitin specific peptidase 19
VAC14 Vac14 homolog (S. cerevisiae)
VAT1 vesicle amine transport 1
VIP vasoactive intestinal peptide
WDR4 WD repeat domain 4
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
ZMYM2 zinc finger, MYM-type 2

Symbol Name
ACOX1 acyl-CoA oxidase 1, palmitoyl
ADAR adenosine deaminase, RNA-specific
AHR aryl hydrocarbon receptor
AJUBA ajuba LIM protein
ANK2 ankyrin 2, neuronal
AP3M2 adaptor-related protein complex 3, mu 2 subunit
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
BAG5 BCL2-associated athanogene 5
C19ORF47 chromosome 19 open reading frame 47
CELF1 CUGBP, Elav-like family member 1
CHAC2 ChaC, cation transport regulator homolog 2 (E. coli)
CHML choroideremia-like (Rab escort protein 2)
CNTNAP1 contactin associated protein 1
CORO1B coronin, actin binding protein, 1B
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CRABP1 cellular retinoic acid binding protein 1
CRACR2B calcium release activated channel regulator 2B
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
CUL4A cullin 4A
CUTC cutC copper transporter
DAP death-associated protein
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1
DUSP11 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)
EPN2 epsin 2
ERH enhancer of rudimentary homolog (Drosophila)
EXOSC3 exosome component 3
FLNB filamin B, beta
GALT galactose-1-phosphate uridylyltransferase
GHITM growth hormone inducible transmembrane protein
GNG5 guanine nucleotide binding protein (G protein), gamma 5
GOSR2 golgi SNAP receptor complex member 2
GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa
HEATR5B HEAT repeat containing 5B
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4
HM13 histocompatibility (minor) 13
HSPA12A heat shock 70kDa protein 12A
IFT20 intraflagellar transport 20
INTS5 integrator complex subunit 5
ISOC1 isochorismatase domain containing 1
ITFG1 integrin alpha FG-GAP repeat containing 1
JUND jun D proto-oncogene
KNOP1 lysine-rich nucleolar protein 1
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial)
LBR lamin B receptor
LMNB1 lamin B1
LOC101927523 uncharacterized LOC101927523
LPIN1 lipin 1
LYN LYN proto-oncogene, Src family tyrosine kinase
MED21 mediator complex subunit 21
MESTP4 mesoderm specific transcript pseudogene 4
MICALL2 MICAL-like 2
MPDZ multiple PDZ domain protein
MRPS21 mitochondrial ribosomal protein S21
MSL1 male-specific lethal 1 homolog (Drosophila)
MXRA7 matrix-remodelling associated 7
MYL6B myosin, light chain 6B, alkali, smooth muscle and non-muscle
NELFB negative elongation factor complex member B
NELFCD negative elongation factor complex member C/D
NHLRC3 NHL repeat containing 3
NLGN1 neuroligin 1
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
PDZD8 PDZ domain containing 8
PIM1 Pim-1 proto-oncogene, serine/threonine kinase
PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma
PLAG1 pleiomorphic adenoma gene 1
PPOX protoporphyrinogen oxidase
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme
PRCC papillary renal cell carcinoma (translocation-associated)
PRPF19 pre-mRNA processing factor 19
RBM8A RNA binding motif protein 8A
RUNX1 runt-related transcription factor 1
SCAF11 SR-related CTD-associated factor 11
SF3B3 splicing factor 3b, subunit 3, 130kDa
SLC19A1 solute carrier family 19 (folate transporter), member 1
SLC25A40 solute carrier family 25, member 40
SLC7A3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3
SNTA1 syntrophin, alpha 1
SP3 Sp3 transcription factor
SPATA20 spermatogenesis associated 20
SPIN1 spindlin 1
SREK1 splicing regulatory glutamine/lysine-rich protein 1
STAT5A signal transducer and activator of transcription 5A
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae)
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae)
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3
TM9SF1 transmembrane 9 superfamily member 1
TP53I3 tumor protein p53 inducible protein 3
URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
USF1 upstream transcription factor 1
USP24 ubiquitin specific peptidase 24
USP9X ubiquitin specific peptidase 9, X-linked
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)
XYLT2 xylosyltransferase II
ZWILCH zwilch kinetochore protein