IQ 1_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description IQ 1 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the IQ 1_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 0.138199
EEF2 eukaryotic translation elongation factor 2 0.104164
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0930634
VCL vinculin 0.0840338
FTH1 ferritin, heavy polypeptide 1 0.080425
TLE4 transducin-like enhancer of split 4 0.0778196
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0643192
RNF213 ring finger protein 213 0.0566958
SIK2 salt-inducible kinase 2 0.0565367
CEMIP cell migration inducing protein, hyaluronan binding 0.0525421
BPTF bromodomain PHD finger transcription factor 0.05026
PDE10A phosphodiesterase 10A 0.049575
LPP LIM domain containing preferred translocation partner in lipoma 0.047203
TPST1 tyrosylprotein sulfotransferase 1 0.0463671
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0458222
PTPRK protein tyrosine phosphatase, receptor type, K 0.0456242
SRRM2 serine/arginine repetitive matrix 2 0.04535
STK38L serine/threonine kinase 38 like 0.0448289
ZSWIM6 zinc finger, SWIM-type containing 6 0.0447425
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.044214
INTS6 integrator complex subunit 6 0.0434993
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0433688
GLCCI1 glucocorticoid induced 1 0.0417483
EGR1 early growth response 1 0.0408845
TRIB2 tribbles pseudokinase 2 0.0401058
RPL7A ribosomal protein L7a 0.0398608
LPIN1 lipin 1 0.0390701
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0387389
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0384743
PTPRE protein tyrosine phosphatase, receptor type, E 0.0378247
NPAS2 neuronal PAS domain protein 2 0.0378064
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0374297
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0368044
PLPP1 phospholipid phosphatase 1 0.0357304
VEGFA vascular endothelial growth factor A 0.035598
PLAT plasminogen activator, tissue 0.0350404
NFE2L1 nuclear factor, erythroid 2-like 1 0.0336326
FHL2 four and a half LIM domains 2 0.0325949
B2M beta-2-microglobulin 0.0323889
RPS17 ribosomal protein S17 0.0323572
SLIT2 slit homolog 2 (Drosophila) 0.032306
FAM107B family with sequence similarity 107, member B 0.0318737
PDE4D phosphodiesterase 4D, cAMP-specific 0.0311718
AMOTL1 angiomotin like 1 0.0307346
TIMP2 TIMP metallopeptidase inhibitor 2 0.0306355
FERMT2 fermitin family member 2 0.0305299
FN1 fibronectin 1 0.0303572
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0303269
ADGRB3 adhesion G protein-coupled receptor B3 0.0301409
GAB2 GRB2-associated binding protein 2 0.0301229
BCAS3 breast carcinoma amplified sequence 3 0.0287966
MCL1 myeloid cell leukemia 1 0.0285559
CALR calreticulin 0.02752
TBX2 T-box 2 0.0272876
TPM1 tropomyosin 1 (alpha) 0.027004
SLC38A2 solute carrier family 38, member 2 0.0266192
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0265473
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0263895
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0260714
FMN1 formin 1 0.0258123
DLG5 discs, large homolog 5 (Drosophila) 0.0257371
CDK6 cyclin-dependent kinase 6 0.0254161
ZC3H13 zinc finger CCCH-type containing 13 0.0253661
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.025363
FNDC3A fibronectin type III domain containing 3A 0.0252181
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0250462
BRD2 bromodomain containing 2 0.0248844
MYH9 myosin, heavy chain 9, non-muscle 0.0248473
EEF1G eukaryotic translation elongation factor 1 gamma 0.0246169
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0245459
THBS1 thrombospondin 1 0.0245416
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0245269
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0240635
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.023922
RPL4 ribosomal protein L4 0.0238416
PNN pinin, desmosome associated protein 0.0236311
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0233705
ANKRD12 ankyrin repeat domain 12 0.0231913
KLHL13 kelch-like family member 13 0.0231784
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0229215
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0228968
PCDH17 protocadherin 17 0.0226322
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0224823
MYO1E myosin IE 0.0222866
HSPA8 heat shock 70kDa protein 8 0.0221775
GRK5 G protein-coupled receptor kinase 5 0.0221166
RPL3 ribosomal protein L3 0.0218354
SMAD3 SMAD family member 3 0.0212391
SEPTIN9 septin 9 0.0210223
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.020884
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.020536
RPL19 ribosomal protein L19 0.0204127
PCBP2 poly(rC) binding protein 2 0.0203758
PCNX4 pecanex 4 0.0201873
JUP junction plakoglobin 0.0201795
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.020006
COL4A2 collagen, type IV, alpha 2 0.0199952
MMP2 matrix metallopeptidase 2 0.0199483
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0199457
VGF VGF nerve growth factor inducible 0.0197427

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.172101
IGF2 insulin-like growth factor 2 -0.143262
VIM vimentin -0.117721
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.103511
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0911695
PTMA prothymosin, alpha -0.0809424
HELZ helicase with zinc finger -0.0755663
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0656468
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0599355
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0594688
FNBP1 formin binding protein 1 -0.056668
NPEPPS aminopeptidase puromycin sensitive -0.0560576
COL3A1 collagen, type III, alpha 1 -0.0549346
KDM3A lysine (K)-specific demethylase 3A -0.0542372
LSAMP limbic system-associated membrane protein -0.0529388
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.051372
RPL34 ribosomal protein L34 -0.0510592
HMGB2 high mobility group box 2 -0.0509763
WDR45B WD repeat domain 45B -0.0509257
KPNB1 karyopherin (importin) beta 1 -0.0498842
MSI2 musashi RNA-binding protein 2 -0.0487028
AKAP12 A kinase (PRKA) anchor protein 12 -0.0476466
OGA O-GlcNAcase -0.0475919
FAM13A family with sequence similarity 13, member A -0.0475172
RPLP1 ribosomal protein, large, P1 -0.0474449
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0462725
NAMPT nicotinamide phosphoribosyltransferase -0.0459261
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0457437
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0448304
SPAG9 sperm associated antigen 9 -0.0438518
BIRC6 baculoviral IAP repeat containing 6 -0.0435909
SOS1 son of sevenless homolog 1 (Drosophila) -0.0434241
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0433442
PTPRM protein tyrosine phosphatase, receptor type, M -0.0427904
HIP1 huntingtin interacting protein 1 -0.0425593
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0424912
COL1A1 collagen, type I, alpha 1 -0.0420848
FNDC3B fibronectin type III domain containing 3B -0.0412335
LCORL ligand dependent nuclear receptor corepressor-like -0.0409159
CANX calnexin -0.0407335
S100A6 S100 calcium binding protein A6 -0.0406072
NDRG1 N-myc downstream regulated 1 -0.0399197
MARCHF6 membrane associated ring-CH-type finger 6 -0.0398418
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0388571
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0385339
SBF2 SET binding factor 2 -0.0385218
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D -0.0384168
HILPDA hypoxia inducible lipid droplet-associated -0.0376863
PTK2 protein tyrosine kinase 2 -0.0376832
CCND1 cyclin D1 -0.0372595
CDC27 cell division cycle 27 -0.037214
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0371734
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0371628
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0368056
SSH2 slingshot protein phosphatase 2 -0.0365961
MEF2A myocyte enhancer factor 2A -0.0365958
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0365209
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0362381
LMNA lamin A/C -0.036156
RAB1A RAB1A, member RAS oncogene family -0.0356438
SEC31A SEC31 homolog A (S. cerevisiae) -0.0354509
RIOK3 RIO kinase 3 -0.0354139
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0346192
H1-0 H1.0 linker histone -0.0345234
NALF1 NALCN channel auxiliary factor 1 -0.0340951
IGFBP3 insulin-like growth factor binding protein 3 -0.034091
QKI QKI, KH domain containing, RNA binding -0.0337465
EXT1 exostosin glycosyltransferase 1 -0.0337405
FOXK2 forkhead box K2 -0.0335855
KMT2E lysine (K)-specific methyltransferase 2E -0.0334035
TCF12 transcription factor 12 -0.0332428
NPR2 natriuretic peptide receptor 2 -0.0331779
GOLGA4 golgin A4 -0.0329596
ACBD3 acyl-CoA binding domain containing 3 -0.0327418
WAC WW domain containing adaptor with coiled-coil -0.0326909
MYO6 myosin VI -0.0321307
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0320111
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0317568
TMSB10 thymosin beta 10 -0.0314224
USP3 ubiquitin specific peptidase 3 -0.0314012
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0308467
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0306337
RHOBTB3 Rho-related BTB domain containing 3 -0.030289
TENT5A terminal nucleotidyltransferase 5A -0.0299809
ZMYM2 zinc finger, MYM-type 2 -0.0298589
RTN4 reticulon 4 -0.029822
AHR aryl hydrocarbon receptor -0.0295235
TET2 tet methylcytosine dioxygenase 2 -0.0294285
MAP4 microtubule-associated protein 4 -0.0291148
CEP350 centrosomal protein 350kDa -0.0288724
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0287669
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0287604
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0284838
PKM pyruvate kinase, muscle -0.0284578
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0283899
PICALM phosphatidylinositol binding clathrin assembly protein -0.0281879
NUP153 nucleoporin 153kDa -0.0281435
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0280421
EIF1 eukaryotic translation initiation factor 1 -0.0280012
MON2 MON2 homolog (S. cerevisiae) -0.0279473