IQ 1_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description IQ 1 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the IQ 1_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.124752
FAT1 FAT atypical cadherin 1 0.0852136
ONECUT3 one cut homeobox 3 0.0850258
TNS4 tensin 4 0.0737304
CEMIP cell migration inducing protein, hyaluronan binding 0.0625896
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0591609
ASPH aspartate beta-hydroxylase 0.0550439
AREG amphiregulin 0.0524359
ACTG1 actin gamma 1 0.0512995
FTH1 ferritin, heavy polypeptide 1 0.0486443
KRT8 keratin 8, type II 0.0484865
VEGFA vascular endothelial growth factor A 0.0475721
LMO7 LIM domain 7 0.0451014
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0444328
HSPA8 heat shock 70kDa protein 8 0.0435153
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0390912
CALR calreticulin 0.0371451
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0369698
EXT1 exostosin glycosyltransferase 1 0.0368417
TMSB4X thymosin beta 4, X-linked 0.035863
KRT18 keratin 18, type I 0.034405
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.033815
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0307031
GMDS GDP-mannose 4,6-dehydratase 0.0297385
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.029246
LOC102724023 ES1 protein homolog, mitochondrial 0.0282987
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0276942
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0266095
JAG1 jagged 1 0.0246995
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0234112
ANTXR2 anthrax toxin receptor 2 0.0232794
EEF2 eukaryotic translation elongation factor 2 0.0227375
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.022285
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0221529
EGFR epidermal growth factor receptor 0.0220072
SRRM2 serine/arginine repetitive matrix 2 0.0219411
DUSP4 dual specificity phosphatase 4 0.0217126
RPL3 ribosomal protein L3 0.0216959
MPRIP myosin phosphatase Rho interacting protein 0.0215513
PLEC plectin 0.0209671
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0207582
MCL1 myeloid cell leukemia 1 0.0204889
MARCHF3 membrane associated ring-CH-type finger 3 0.0204875
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0201823
FLNB filamin B, beta 0.0200965
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.020024
PSD3 pleckstrin and Sec7 domain containing 3 0.0191962
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0190268
MUC13 mucin 13, cell surface associated 0.018995
MYH9 myosin, heavy chain 9, non-muscle 0.0189724
ITPRID2 ITPR interacting domain containing 2 0.0183988
ADM adrenomedullin 0.0181407
ENO2 enolase 2 (gamma, neuronal) 0.0181108
POTEF POTE ankyrin domain family, member F 0.017673
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0175488
SLC38A2 solute carrier family 38, member 2 0.0174925
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0174868
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0171785
SHB Src homology 2 domain containing adaptor protein B 0.0171388
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0168774
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0167714
MYO1E myosin IE 0.0165043
TPM3 tropomyosin 3 0.0164351
FLNA filamin A, alpha 0.0163995
SEPTIN9 septin 9 0.0162942
CADPS Ca++-dependent secretion activator 0.01616
TUBB4B tubulin, beta 4B class IVb 0.0161598
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0160081
LURAP1L leucine rich adaptor protein 1-like 0.0159813
SOX4 SRY (sex determining region Y)-box 4 0.0158971
MT2A metallothionein 2A 0.0154491
TPM4 tropomyosin 4 0.0150709
TSC22D1 TSC22 domain family, member 1 0.0150618
PDE10A phosphodiesterase 10A 0.0149499
SIM2 single-minded family bHLH transcription factor 2 0.0146467
PDZD8 PDZ domain containing 8 0.0145021
SMC1A structural maintenance of chromosomes 1A 0.0142996
PDLIM5 PDZ and LIM domain 5 0.0142095
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0136029
F3 coagulation factor III (thromboplastin, tissue factor) 0.0135851
INTS6 integrator complex subunit 6 0.013445
LDHA lactate dehydrogenase A 0.0133356
PTPRK protein tyrosine phosphatase, receptor type, K 0.0132713
RPN1 ribophorin I 0.0130658
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.0128982
EIF5 eukaryotic translation initiation factor 5 0.0128703
LAMA4 laminin, alpha 4 0.0126327
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0126176
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0126134
LGALS3 lectin, galactoside-binding, soluble, 3 0.0125437
APLP2 amyloid beta (A4) precursor-like protein 2 0.0123492
FOSL1 FOS-like antigen 1 0.0122565
TGFBR3 transforming growth factor, beta receptor III 0.012242
CLCN3 chloride channel, voltage-sensitive 3 0.0120629
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0118019
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0117322
LUZP1 leucine zipper protein 1 0.0117224
CEMIP2 cell migration inducing hyaluronidase 2 0.011626
SMAD3 SMAD family member 3 0.0115965
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0115785

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.226648
NPSR1 neuropeptide S receptor 1 -0.10393
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0913739
RPS6 ribosomal protein S6 -0.0632503
NALF1 NALCN channel auxiliary factor 1 -0.0619661
GOLGA4 golgin A4 -0.059236
TPT1 tumor protein, translationally-controlled 1 -0.0580111
RPLP1 ribosomal protein, large, P1 -0.0580011
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0578933
RPL34 ribosomal protein L34 -0.0569442
GPHN gephyrin -0.0524806
PTMA prothymosin, alpha -0.052241
RPLP0 ribosomal protein, large, P0 -0.0517022
RBM39 RNA binding motif protein 39 -0.0511225
ALCAM activated leukocyte cell adhesion molecule -0.0469785
MED13L mediator complex subunit 13-like -0.0468815
RAB1A RAB1A, member RAS oncogene family -0.0453578
GCC2 GRIP and coiled-coil domain containing 2 -0.0448731
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0432284
KDM3A lysine (K)-specific demethylase 3A -0.0430953
RPL12 ribosomal protein L12 -0.0427053
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.04269
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0416073
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0410077
PNISR PNN-interacting serine/arginine-rich protein -0.0409859
IARS1 isoleucyl-tRNA synthetase 1 -0.0406397
RPL27A ribosomal protein L27a -0.0404438
RPS27A ribosomal protein S27a -0.0393003
ZFAND3 zinc finger, AN1-type domain 3 -0.0391351
WDR45B WD repeat domain 45B -0.0380753
RPS12 ribosomal protein S12 -0.0375177
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0373117
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0370137
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0370061
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0363778
GDF15 growth differentiation factor 15 -0.0361268
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0358196
NF1 neurofibromin 1 -0.0352378
RPL26 ribosomal protein L26 -0.0351025
ANKRD11 ankyrin repeat domain 11 -0.0347416
RPS8 ribosomal protein S8 -0.0342711
RPL13A ribosomal protein L13a -0.0341565
SERINC5 serine incorporator 5 -0.0341553
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0340352
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0340296
WAC WW domain containing adaptor with coiled-coil -0.0334758
PTPRR protein tyrosine phosphatase, receptor type, R -0.0333198
RPS25 ribosomal protein S25 -0.0328727
PUM2 pumilio RNA-binding family member 2 -0.0325804
RPS24 ribosomal protein S24 -0.0325614
RPLP2 ribosomal protein, large, P2 -0.0324255
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.032109
SBF2 SET binding factor 2 -0.0319574
EIF1 eukaryotic translation initiation factor 1 -0.0316595
CANX calnexin -0.0315735
COG5 component of oligomeric golgi complex 5 -0.0312451
RPL35A ribosomal protein L35a -0.031228
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0309629
GARS1 glycyl-tRNA synthetase 1 -0.0308894
RPL37 ribosomal protein L37 -0.0306229
ZNF292 zinc finger protein 292 -0.0303471
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0300122
SETD5 SET domain containing 5 -0.0299277
RPL37A ribosomal protein L37a -0.0299001
RPS16 ribosomal protein S16 -0.0298697
S100A6 S100 calcium binding protein A6 -0.029754
MAP4 microtubule-associated protein 4 -0.0297369
SEC31A SEC31 homolog A (S. cerevisiae) -0.0296607
BIRC6 baculoviral IAP repeat containing 6 -0.0295827
RPS2 ribosomal protein S2 -0.0293891
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.029089
RNF145 ring finger protein 145 -0.0289328
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.028589
TMSB10 thymosin beta 10 -0.0284999
RPL11 ribosomal protein L11 -0.0284328
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0282706
AGR2 anterior gradient 2 -0.028239
NAP1L1 nucleosome assembly protein 1-like 1 -0.0282385
FAM13A family with sequence similarity 13, member A -0.0282342
MATR3 matrin 3 -0.0281023
NFIA nuclear factor I/A -0.0279191
MARCHF6 membrane associated ring-CH-type finger 6 -0.0274119
RPS13 ribosomal protein S13 -0.0273972
RPS3 ribosomal protein S3 -0.0272155
RPS19 ribosomal protein S19 -0.0271485
AHNAK AHNAK nucleoprotein -0.0271023
ESYT2 extended synaptotagmin-like protein 2 -0.0270371
USP3 ubiquitin specific peptidase 3 -0.0269338
OGA O-GlcNAcase -0.0266579
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0264089
HMGA1 high mobility group AT-hook 1 -0.0263408
CD46 CD46 molecule, complement regulatory protein -0.0262385
KPNB1 karyopherin (importin) beta 1 -0.026191
RPL23 ribosomal protein L23 -0.0261103
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0260237
S100P S100 calcium binding protein P -0.0259864
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0257177
MECOM MDS1 and EVI1 complex locus -0.0256328
RACK1 receptor for activated C kinase 1 -0.0256121
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0255694