IQ 1_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description IQ 1 perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the IQ 1_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB4X thymosin beta 4, X-linked 0.145185
PDE4D phosphodiesterase 4D, cAMP-specific 0.0924971
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0892534
EGFR epidermal growth factor receptor 0.0846618
EZR ezrin 0.082479
EEF2 eukaryotic translation elongation factor 2 0.0787292
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0725377
PKM pyruvate kinase, muscle 0.0660204
TACC2 transforming, acidic coiled-coil containing protein 2 0.0609637
ANXA1 annexin A1 0.0581907
DUSP4 dual specificity phosphatase 4 0.0572578
MYO5C myosin VC 0.0570109
PDGFC platelet derived growth factor C 0.055814
SRRM2 serine/arginine repetitive matrix 2 0.0545025
FOXP1 forkhead box P1 0.0530714
ENO2 enolase 2 (gamma, neuronal) 0.0526289
RPL3 ribosomal protein L3 0.0496631
PTMA prothymosin, alpha 0.0490554
FER1L6 fer-1-like family member 6 0.048258
NCEH1 neutral cholesterol ester hydrolase 1 0.0456934
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0451796
SPRY2 sprouty homolog 2 (Drosophila) 0.0433455
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0432015
INTS6 integrator complex subunit 6 0.0427193
SOX6 SRY (sex determining region Y)-box 6 0.0422816
RPL7A ribosomal protein L7a 0.0419719
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0410553
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0399437
EEF1G eukaryotic translation elongation factor 1 gamma 0.0382068
TM4SF1 transmembrane 4 L six family member 1 0.0364288
VCL vinculin 0.0356847
LOXL3 lysyl oxidase-like 3 0.033322
ACTG1 actin gamma 1 0.0332842
IFI16 interferon, gamma-inducible protein 16 0.0332304
FBLN2 fibulin 2 0.031806
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0314611
ARHGAP25 Rho GTPase activating protein 25 0.0310396
ADAM10 ADAM metallopeptidase domain 10 0.03035
UNC13A unc-13 homolog A (C. elegans) 0.0299108
POTEF POTE ankyrin domain family, member F 0.0297062
ZNF608 zinc finger protein 608 0.0289513
DSCAM Down syndrome cell adhesion molecule 0.0289094
MLIP muscular LMNA-interacting protein 0.0284144
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0276443
GSE1 Gse1 coiled-coil protein 0.0273984
SGMS2 sphingomyelin synthase 2 0.0273961
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0272265
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.0269333
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0264202
HSPA8 heat shock 70kDa protein 8 0.0263793
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0262962
ARL4C ADP-ribosylation factor-like 4C 0.0262053
MYOF myoferlin 0.026017
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0254551
ZMIZ1 zinc finger, MIZ-type containing 1 0.0252587
SMAD3 SMAD family member 3 0.025137
GLI3 GLI family zinc finger 3 0.0245954
PRPF38B pre-mRNA processing factor 38B 0.0242758
TGFBR3 transforming growth factor, beta receptor III 0.0241788
CSF1 colony stimulating factor 1 (macrophage) 0.0236183
SOX9 SRY (sex determining region Y)-box 9 0.0235802
GLI2 GLI family zinc finger 2 0.023311
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0230585
RSF1 remodeling and spacing factor 1 0.0227073
UHMK1 U2AF homology motif (UHM) kinase 1 0.022571
TRIOBP TRIO and F-actin binding protein 0.0224817
ARID1A AT rich interactive domain 1A (SWI-like) 0.0224421
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.021553
KMT2D lysine (K)-specific methyltransferase 2D 0.02146
USP47 ubiquitin specific peptidase 47 0.0214203
AMOTL2 angiomotin like 2 0.0208625
RRM2 ribonucleotide reductase M2 0.0208363
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0207975
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0206934
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0200969
ANKRD36B ankyrin repeat domain 36B 0.0200669
PLXNA1 plexin A1 0.0199957
ZEB1 zinc finger E-box binding homeobox 1 0.0199242
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0199148
AEBP2 AE binding protein 2 0.0199032
LMCD1 LIM and cysteine-rich domains 1 0.0196183
FAT1 FAT atypical cadherin 1 0.0196136
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0196095
CYB5B cytochrome b5 type B (outer mitochondrial membrane) 0.0195049
SMAD6 SMAD family member 6 0.0195045
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.0194817
TMCO3 transmembrane and coiled-coil domains 3 0.0193263
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0190788
FLNB filamin B, beta 0.0187695
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0187406
PRELID2 PRELI domain containing 2 0.0187332
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0186803
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.0184134
RBM5 RNA binding motif protein 5 0.0184083
YAP1 Yes-associated protein 1 0.018389
SON SON DNA binding protein 0.0183879
TRIM24 tripartite motif containing 24 0.0183374
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.0182365
BRD2 bromodomain containing 2 0.0181967
SPRED1 sprouty-related, EVH1 domain containing 1 0.0181457

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.183912
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.102191
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0964267
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0949119
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0861579
IGF2 insulin-like growth factor 2 -0.0781731
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0723304
S100A6 S100 calcium binding protein A6 -0.0701131
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.06832
RBM39 RNA binding motif protein 39 -0.0642305
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0601056
SSBP2 single-stranded DNA binding protein 2 -0.0588954
EVI5 ecotropic viral integration site 5 -0.0581529
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0580565
TPT1 tumor protein, translationally-controlled 1 -0.0579793
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.056504
FTL ferritin, light polypeptide -0.055835
ZNF292 zinc finger protein 292 -0.055686
NAP1L1 nucleosome assembly protein 1-like 1 -0.0554097
RPS6 ribosomal protein S6 -0.0548596
FNDC3B fibronectin type III domain containing 3B -0.0532368
B2M beta-2-microglobulin -0.0522419
RPLP0 ribosomal protein, large, P0 -0.0476786
RPS27A ribosomal protein S27a -0.0450206
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0439025
NAMPT nicotinamide phosphoribosyltransferase -0.0416479
PNISR PNN-interacting serine/arginine-rich protein -0.0414567
RPL28 ribosomal protein L28 -0.0414419
WSB1 WD repeat and SOCS box containing 1 -0.0410842
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0408994
GOLGA4 golgin A4 -0.0404418
EIF1 eukaryotic translation initiation factor 1 -0.0402355
TXNRD1 thioredoxin reductase 1 -0.0401474
RPL35A ribosomal protein L35a -0.0397307
EFNA5 ephrin-A5 -0.0391151
ZBTB20 zinc finger and BTB domain containing 20 -0.0390033
CANX calnexin -0.0384583
RSL1D1 ribosomal L1 domain containing 1 -0.037809
RPLP1 ribosomal protein, large, P1 -0.0377688
COG5 component of oligomeric golgi complex 5 -0.0366393
CAMKMT calmodulin-lysine N-methyltransferase -0.0363999
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0362984
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0361331
RPS29 ribosomal protein S29 -0.0353998
RPS16 ribosomal protein S16 -0.0352667
KPNB1 karyopherin (importin) beta 1 -0.0349028
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0348253
PDE10A phosphodiesterase 10A -0.0346441
NF1 neurofibromin 1 -0.0345991
PGK1 phosphoglycerate kinase 1 -0.0343193
RBMS2 RNA binding motif, single stranded interacting protein 2 -0.0342046
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0333536
RPS19 ribosomal protein S19 -0.032312
VIM vimentin -0.0320282
MSI2 musashi RNA-binding protein 2 -0.0317775
RPS11 ribosomal protein S11 -0.0314079
RPS24 ribosomal protein S24 -0.0308716
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0307254
MATR3 matrin 3 -0.0307029
SREBF2 sterol regulatory element binding transcription factor 2 -0.0305657
USP3 ubiquitin specific peptidase 3 -0.0303791
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0302453
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0301456
SBF2 SET binding factor 2 -0.0300786
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0300032
ADNP activity-dependent neuroprotector homeobox -0.0299291
LMAN1 lectin, mannose-binding, 1 -0.0298478
RPS23 ribosomal protein S23 -0.0296239
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0295535
NFIA nuclear factor I/A -0.0295372
BIRC6 baculoviral IAP repeat containing 6 -0.029452
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0293445
KDM3A lysine (K)-specific demethylase 3A -0.0293067
PDIA6 protein disulfide isomerase family A, member 6 -0.0292972
RPS5 ribosomal protein S5 -0.0292805
XPO1 exportin 1 -0.0292153
S100A4 S100 calcium binding protein A4 -0.0291411
ADAM9 ADAM metallopeptidase domain 9 -0.0290486
RPS25 ribosomal protein S25 -0.0290139
VGLL4 vestigial-like family member 4 -0.0285628
PHIP pleckstrin homology domain interacting protein -0.0284905
MARCHF7 membrane associated ring-CH-type finger 7 -0.0283164
ANKRD10 ankyrin repeat domain 10 -0.0282647
MAP4 microtubule-associated protein 4 -0.0281894
RPL34 ribosomal protein L34 -0.0281725
RHOA ras homolog family member A -0.0280795
CSDE1 cold shock domain containing E1, RNA-binding -0.0277731
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0277704
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0276791
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0276582
GARS1 glycyl-tRNA synthetase 1 -0.0276453
RNF145 ring finger protein 145 -0.0273313
USP9X ubiquitin specific peptidase 9, X-linked -0.0273135
RPS2 ribosomal protein S2 -0.0272767
P4HB prolyl 4-hydroxylase, beta polypeptide -0.027276
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.027012
NCKAP1 NCK-associated protein 1 -0.0268596
PTK2 protein tyrosine kinase 2 -0.0267501
RPL27A ribosomal protein L27a -0.0267179
MARCHF6 membrane associated ring-CH-type finger 6 -0.026626