IQ 1_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description IQ 1 perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the IQ 1_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.418223
FTH1 ferritin, heavy polypeptide 1 0.300947
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.161941
NRG1 neuregulin 1 0.138625
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.131031
HLA-B major histocompatibility complex, class I, B 0.114989
ASPH aspartate beta-hydroxylase 0.0994078
HMGA2 high mobility group AT-hook 2 0.0959966
STC2 stanniocalcin 2 0.0800432
SFTPA2 surfactant protein A2 0.0752313
CALR calreticulin 0.0722102
B2M beta-2-microglobulin 0.068508
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.067179
ACTG1 actin gamma 1 0.0629832
TMSB4X thymosin beta 4, X-linked 0.062926
TMSB10 thymosin beta 10 0.0607688
HIPK2 homeodomain interacting protein kinase 2 0.0578699
VEGFA vascular endothelial growth factor A 0.0577084
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0567203
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.055659
FTL ferritin, light polypeptide 0.0539944
LIMCH1 LIM and calponin homology domains 1 0.0538202
ENO2 enolase 2 (gamma, neuronal) 0.0535569
AKAP12 A kinase (PRKA) anchor protein 12 0.0523881
LOXL2 lysyl oxidase-like 2 0.0491962
EXT1 exostosin glycosyltransferase 1 0.0488061
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0473498
INTS6 integrator complex subunit 6 0.0473352
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0448048
LOC102724023 ES1 protein homolog, mitochondrial 0.044129
SOX4 SRY (sex determining region Y)-box 4 0.0438902
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0431194
GRB10 growth factor receptor-bound protein 10 0.0414494
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0409822
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0407684
IFI27 interferon, alpha-inducible protein 27 0.0402734
TMED9 transmembrane emp24 protein transport domain containing 9 0.0398206
LMNA lamin A/C 0.0395402
MRPS6 mitochondrial ribosomal protein S6 0.0390105
SRRM2 serine/arginine repetitive matrix 2 0.0386916
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0376745
ZSWIM6 zinc finger, SWIM-type containing 6 0.0376126
MCL1 myeloid cell leukemia 1 0.0371206
PTMA prothymosin, alpha 0.0370394
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0364699
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0362226
HLA-A major histocompatibility complex, class I, A 0.0356503
EFNA5 ephrin-A5 0.0350423
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0349962
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.033905
CTSB cathepsin B 0.0334949
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0329139
RNF213 ring finger protein 213 0.0328849
FLNA filamin A, alpha 0.0327231
SLC38A2 solute carrier family 38, member 2 0.0324555
ENO1 enolase 1, (alpha) 0.0321284
IFI6 interferon, alpha-inducible protein 6 0.0306776
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0304599
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0301114
PALLD palladin, cytoskeletal associated protein 0.0294831
SMAD3 SMAD family member 3 0.0292357
IGFBP3 insulin-like growth factor binding protein 3 0.0287368
S100A10 S100 calcium binding protein A10 0.0285998
DUSP6 dual specificity phosphatase 6 0.0284054
SLC35F3 solute carrier family 35, member F3 0.0281373
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0279245
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0278743
GLIS3 GLIS family zinc finger 3 0.02724
MT2A metallothionein 2A 0.0269523
ITGA1 integrin, alpha 1 0.0266463
DOCK5 dedicator of cytokinesis 5 0.0263807
RASAL2 RAS protein activator like 2 0.0261109
BASP1 brain abundant, membrane attached signal protein 1 0.0260085
TGFB1 transforming growth factor, beta 1 0.0259608
NTN4 netrin 4 0.0255513
MLPH melanophilin 0.0252035
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0250603
NFE2L1 nuclear factor, erythroid 2-like 1 0.0250103
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 0.0248787
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0245718
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0244661
CTBP2 C-terminal binding protein 2 0.0241638
SAMD4A sterile alpha motif domain containing 4A 0.0241379
SEPTIN9 septin 9 0.0240615
TPT1 tumor protein, translationally-controlled 1 0.023729
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0236807
EEF2 eukaryotic translation elongation factor 2 0.0235124
PDE4D phosphodiesterase 4D, cAMP-specific 0.023379
RPL31 ribosomal protein L31 0.0231929
TCIM transcriptional and immune response regulator 0.0227726
EGFR epidermal growth factor receptor 0.0227244
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0226302
SHB Src homology 2 domain containing adaptor protein B 0.0226144
CLIP2 CAP-GLY domain containing linker protein 2 0.0223409
FHL2 four and a half LIM domains 2 0.0222953
AEBP2 AE binding protein 2 0.0220724
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0219038
PSD3 pleckstrin and Sec7 domain containing 3 0.0216052
TSHZ2 teashirt zinc finger homeobox 2 0.0213494
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0212437

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.134967
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0984169
CENPF centromere protein F, 350/400kDa -0.0618664
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0606515
ZNF292 zinc finger protein 292 -0.0592187
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0581981
AHR aryl hydrocarbon receptor -0.0580491
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0533939
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0509772
OGA O-GlcNAcase -0.0488849
NEK7 NIMA-related kinase 7 -0.0468267
CANX calnexin -0.0463421
RNF145 ring finger protein 145 -0.0444721
NAP1L1 nucleosome assembly protein 1-like 1 -0.0437145
RBM39 RNA binding motif protein 39 -0.0427597
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0425293
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0403834
ETNK1 ethanolamine kinase 1 -0.0401287
LCORL ligand dependent nuclear receptor corepressor-like -0.0380776
GOLGA4 golgin A4 -0.0368638
PUM2 pumilio RNA-binding family member 2 -0.0364941
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0362876
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0361891
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.034942
MARCHF6 membrane associated ring-CH-type finger 6 -0.0347379
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0347185
FNDC3B fibronectin type III domain containing 3B -0.0338768
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0338699
ANLN anillin, actin binding protein -0.0329939
SPAG9 sperm associated antigen 9 -0.0320792
MIS18BP1 MIS18 binding protein 1 -0.0316076
XPO1 exportin 1 -0.0315983
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0313457
WAC WW domain containing adaptor with coiled-coil -0.0311909
TM9SF3 transmembrane 9 superfamily member 3 -0.0309038
JMJD1C jumonji domain containing 1C -0.03079
ELL2 elongation factor, RNA polymerase II, 2 -0.0306895
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0305871
TFG TRK-fused gene -0.0305022
KMT2E lysine (K)-specific methyltransferase 2E -0.0297923
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0294804
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0287397
NUP58 nucleoporin 58 -0.0286264
SUCO SUN domain containing ossification factor -0.0282716
RAB8B RAB8B, member RAS oncogene family -0.0281056
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0281
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0278841
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0277956
BIRC6 baculoviral IAP repeat containing 6 -0.0276045
GOLT1B golgi transport 1B -0.0276011
SEPTIN7 septin 7 -0.0275269
HELZ helicase with zinc finger -0.0274779
CDC73 cell division cycle 73 -0.0268281
KDM3A lysine (K)-specific demethylase 3A -0.0266827
CD109 CD109 molecule -0.0264185
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0261238
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0260243
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0259666
TENT2 terminal nucleotidyltransferase 2 -0.0259257
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0258295
IRAK3 interleukin-1 receptor-associated kinase 3 -0.0257825
RPS6 ribosomal protein S6 -0.0256579
YME1L1 YME1-like 1 ATPase -0.0254951
RTN4 reticulon 4 -0.0249228
FNBP1 formin binding protein 1 -0.0247783
RLF rearranged L-myc fusion -0.0244676
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0243075
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.02416
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0239595
UGCG UDP-glucose ceramide glucosyltransferase -0.0239315
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0237995
SRPK2 SRSF protein kinase 2 -0.0236487
FAM168B family with sequence similarity 168, member B -0.0235999
TRA2A transformer 2 alpha homolog (Drosophila) -0.0233233
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0233131
PNISR PNN-interacting serine/arginine-rich protein -0.023259
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0230974
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0230579
MKI67 marker of proliferation Ki-67 -0.0226911
RO60 Ro60, Y RNA binding protein -0.0224512
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0222856
NIPBL Nipped-B homolog (Drosophila) -0.0221933
TPX2 TPX2, microtubule-associated -0.0221041
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0219742
USP12 ubiquitin specific peptidase 12 -0.0218793
USP3 ubiquitin specific peptidase 3 -0.0217997
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0216934
COG5 component of oligomeric golgi complex 5 -0.0216772
CEP350 centrosomal protein 350kDa -0.021454
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0214404
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0214153
SP3 Sp3 transcription factor -0.0213434
RPS2 ribosomal protein S2 -0.0213381
MATR3 matrin 3 -0.0212296
RAB18 RAB18, member RAS oncogene family -0.0212062
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0209282
CARD16 caspase recruitment domain family, member 16 -0.0206483
DIAPH3 diaphanous-related formin 3 -0.0206132
PICALM phosphatidylinositol binding clathrin assembly protein -0.0205141
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0203582