Idarubicin (hydrochloride)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.178897
TUBA1B tubulin, alpha 1b 0.0633112
EGR1 early growth response 1 0.0608387
EZR ezrin 0.0587684
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0567716
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0550879
MKI67 marker of proliferation Ki-67 0.0544777
YBX3 Y box binding protein 3 0.0519976
RTN4 reticulon 4 0.0513227
TMEM41B transmembrane protein 41B 0.0495406
MARCHF4 membrane associated ring-CH-type finger 4 0.0493906
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0479423
HSPA8 heat shock 70kDa protein 8 0.0473839
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0457348
TPM3 tropomyosin 3 0.0426155
RPS6 ribosomal protein S6 0.042244
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0412208
STARD4 StAR-related lipid transfer (START) domain containing 4 0.040801
AKAP12 A kinase (PRKA) anchor protein 12 0.0388375
DIAPH3 diaphanous-related formin 3 0.0376667
TPI1 triosephosphate isomerase 1 0.0374965
IPO7 importin 7 0.0339427
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0337015
JMJD1C jumonji domain containing 1C 0.0334286
OSBPL8 oxysterol binding protein-like 8 0.0333808
CALR calreticulin 0.0333296
RASAL2 RAS protein activator like 2 0.0318406
VMP1 vacuole membrane protein 1 0.0312761
VIM vimentin 0.0304943
EDARADD EDAR-associated death domain 0.0300279
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0299509
CMIP c-Maf inducing protein 0.0296801
ATAD2 ATPase family, AAA domain containing 2 0.0295434
RPL4 ribosomal protein L4 0.0291942
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0291527
SMC1A structural maintenance of chromosomes 1A 0.0287444
SMC4 structural maintenance of chromosomes 4 0.0283865
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0280667
EIF4B eukaryotic translation initiation factor 4B 0.0278022
CYFIP2 cytoplasmic FMR1 interacting protein 2 0.027773
SSH2 slingshot protein phosphatase 2 0.027361
GCG glucagon 0.0268075
POLH polymerase (DNA directed), eta 0.0267631
LRMDA leucine rich melanocyte differentiation associated 0.0266179
MYO10 myosin X 0.0265801
ASCC3 activating signal cointegrator 1 complex subunit 3 0.026229
PTMA prothymosin, alpha 0.0260991
TRAPPC9 trafficking protein particle complex 9 0.0260837
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0260682
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0259087
DOCK3 dedicator of cytokinesis 3 0.0257709
PA2G4 proliferation-associated 2G4, 38kDa 0.0255137
CALD1 caldesmon 1 0.0254261
PCLO piccolo presynaptic cytomatrix protein 0.0242964
HELLS helicase, lymphoid-specific 0.0239297
ANKRD26 ankyrin repeat domain 26 0.0237252
NECTIN3 nectin cell adhesion molecule 3 0.0237222
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0236916
BRCA1 breast cancer 1, early onset 0.0235781
TUBB6 tubulin, beta 6 class V 0.0235622
DTNB dystrobrevin, beta 0.0231777
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0230399
SRRM2 serine/arginine repetitive matrix 2 0.0227197
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0222201
BRD2 bromodomain containing 2 0.022212
ASPH aspartate beta-hydroxylase 0.0219776
ARID1A AT rich interactive domain 1A (SWI-like) 0.0219595
RAD51B RAD51 paralog B 0.0218981
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0218056
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0216179
PGAM4 phosphoglycerate mutase family member 4 0.0215328
E2F7 E2F transcription factor 7 0.0215088
FOXP1 forkhead box P1 0.0213259
EIF1 eukaryotic translation initiation factor 1 0.0212925
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0212838
MMS22L MMS22-like, DNA repair protein 0.0211993
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0211428
SLC39A11 solute carrier family 39, member 11 0.0208711
LOC102724023 ES1 protein homolog, mitochondrial 0.0208666
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0208322
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0207948
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0200004
RAD51AP1 RAD51 associated protein 1 0.0199758
TUBB4B tubulin, beta 4B class IVb 0.0199752
NTN1 netrin 1 0.0198303
PHACTR4 phosphatase and actin regulator 4 0.0196587
CEP112 centrosomal protein 112kDa 0.019565
POLA2 polymerase (DNA directed), alpha 2, accessory subunit 0.0192907
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0192722
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0192265
FAF1 Fas (TNFRSF6) associated factor 1 0.0190574
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0190026
RABGAP1L RAB GTPase activating protein 1-like 0.0189229
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 0.0187023
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0186348
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0184108
EGFR epidermal growth factor receptor 0.0183046
UBASH3B ubiquitin associated and SH3 domain containing B 0.0182926
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0182691
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0181393

decreased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 -0.389246
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.169579
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.105347
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.104609
MGAT4C MGAT4 family, member C -0.104592
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.103578
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0915272
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.088313
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0876528
TENM3 teneurin transmembrane protein 3 -0.0864676
MMP12 matrix metallopeptidase 12 -0.0830571
TMSB10 thymosin beta 10 -0.0791928
ZNF804A zinc finger protein 804A -0.0781441
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0781384
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0664732
PCDH7 protocadherin 7 -0.0661642
BCHE butyrylcholinesterase -0.060618
BIRC6 baculoviral IAP repeat containing 6 -0.0594156
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0576803
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0576392
RPL23 ribosomal protein L23 -0.0569436
EPHA6 EPH receptor A6 -0.0537896
ANXA1 annexin A1 -0.0536908
BIRC3 baculoviral IAP repeat containing 3 -0.0529164
POTEF POTE ankyrin domain family, member F -0.0526081
DST dystonin -0.0497007
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0496605
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0495119
TAS2R14 taste receptor, type 2, member 14 -0.0491298
ATP5F1B ATP synthase F1 subunit beta -0.0489934
FBXO11 F-box protein 11 -0.0478628
DPYD dihydropyrimidine dehydrogenase -0.047503
HDAC9 histone deacetylase 9 -0.0467921
CARD16 caspase recruitment domain family, member 16 -0.0440389
USP34 ubiquitin specific peptidase 34 -0.0439446
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0438905
CXADR coxsackie virus and adenovirus receptor -0.0436986
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0436522
ZNF292 zinc finger protein 292 -0.043643
ECT2 epithelial cell transforming 2 -0.0434058
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0421418
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0417792
PGK1 phosphoglycerate kinase 1 -0.0417158
ARHGAP12 Rho GTPase activating protein 12 -0.0413979
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0409071
SBNO1 strawberry notch homolog 1 (Drosophila) -0.040786
CELF2 CUGBP, Elav-like family member 2 -0.0407492
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0404892
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0386248
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0376469
RPL35A ribosomal protein L35a -0.0374155
CPOX coproporphyrinogen oxidase -0.0373406
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0373142
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.037028
INTS6 integrator complex subunit 6 -0.0364875
HMGA1 high mobility group AT-hook 1 -0.0363921
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0357408
PCDH9 protocadherin 9 -0.0356886
LDHA lactate dehydrogenase A -0.0356835
PUM2 pumilio RNA-binding family member 2 -0.0355934
KIF5B kinesin family member 5B -0.0353205
EHBP1 EH domain binding protein 1 -0.0344109
GSK3B glycogen synthase kinase 3 beta -0.033656
RPS24 ribosomal protein S24 -0.033447
KDM3A lysine (K)-specific demethylase 3A -0.0331149
SYT1 synaptotagmin I -0.0330734
OXR1 oxidation resistance 1 -0.0329102
AHNAK AHNAK nucleoprotein -0.0328733
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0328448
RYK receptor-like tyrosine kinase -0.0328279
RPL19 ribosomal protein L19 -0.0326353
KMT2E lysine (K)-specific methyltransferase 2E -0.0325833
CDK6 cyclin-dependent kinase 6 -0.0322801
VDAC1 voltage-dependent anion channel 1 -0.0321053
KLHL24 kelch-like family member 24 -0.0315365
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0315203
MED13 mediator complex subunit 13 -0.031386
ADAM9 ADAM metallopeptidase domain 9 -0.0311877
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0303649
MED13L mediator complex subunit 13-like -0.030001
SPDYA speedy/RINGO cell cycle regulator family member A -0.0297635
GASK1B golgi associated kinase 1B -0.0296457
RPL8 ribosomal protein L8 -0.0295884
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0293654
ADGRG6 adhesion G protein-coupled receptor G6 -0.0292217
ZNF217 zinc finger protein 217 -0.0291249
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0289375
NIPBL Nipped-B homolog (Drosophila) -0.0287494
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0286069
RC3H1 ring finger and CCCH-type domains 1 -0.0284731
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0278529
HELZ helicase with zinc finger -0.0278215
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0277508
CKAP5 cytoskeleton associated protein 5 -0.0276209
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0276023
ZMYM2 zinc finger, MYM-type 2 -0.0274973
CAMKMT calmodulin-lysine N-methyltransferase -0.0272
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0269732
EFNA5 ephrin-A5 -0.0265797
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0265746