Idarubicin (hydrochloride)_A498 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in A498 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_A498 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.0892908
RPS6 ribosomal protein S6 0.0889903
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0639052
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0580609
RPS2 ribosomal protein S2 0.0540944
TPM3 tropomyosin 3 0.0391022
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0375029
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0344389
GPC5 glypican 5 0.0319857
SFTPA2 surfactant protein A2 0.0310844
NFE2L1 nuclear factor, erythroid 2-like 1 0.0296151
TIMP2 TIMP metallopeptidase inhibitor 2 0.0294907
TLN1 talin 1 0.0279306
FTL ferritin, light polypeptide 0.0275379
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0268932
CTSD cathepsin D 0.0249495
RPS8 ribosomal protein S8 0.0244247
EIF1 eukaryotic translation initiation factor 1 0.0240397
RND3 Rho family GTPase 3 0.0223285
HSPA8 heat shock 70kDa protein 8 0.0217632
ATF3 activating transcription factor 3 0.0212149
DSTN destrin (actin depolymerizing factor) 0.0202473
CALR calreticulin 0.0199701
RPL4 ribosomal protein L4 0.0198587
IL32 interleukin 32 0.0196541
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0195117
APLP2 amyloid beta (A4) precursor-like protein 2 0.0192677
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0187713
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0183598
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0179736
SERF2 small EDRK-rich factor 2 0.0178654
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0174267
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0171686
YBX1 Y box binding protein 1 0.0170332
IGFBP7 insulin-like growth factor binding protein 7 0.0168843
PDIA3 protein disulfide isomerase family A, member 3 0.0167036
SEPTIN9 septin 9 0.0166251
FLNA filamin A, alpha 0.0165192
MSN moesin 0.0164996
RPLP2 ribosomal protein, large, P2 0.0158178
TPI1 triosephosphate isomerase 1 0.0158114
TAFA2 TAFA chemokine like family member 2 0.0154506
PGAM4 phosphoglycerate mutase family member 4 0.0153156
MYH9 myosin, heavy chain 9, non-muscle 0.0152103
RPS12 ribosomal protein S12 0.0149856
S100A11 S100 calcium binding protein A11 0.0149225
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0149036
BRD2 bromodomain containing 2 0.014431
EIF4H eukaryotic translation initiation factor 4H 0.0143557
PEA15 phosphoprotein enriched in astrocytes 15 0.0142732
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0141416
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.013874
GRN granulin 0.013769
RIPOR1 RHO family interacting cell polarization regulator 1 0.0137679
RHBDF2 rhomboid 5 homolog 2 (Drosophila) 0.0136766
COL4A1 collagen, type IV, alpha 1 0.0135722
ZMAT3 zinc finger, matrin-type 3 0.0135366
HSPH1 heat shock 105kDa/110kDa protein 1 0.0134526
TUBA1B tubulin, alpha 1b 0.0133969
RTN4 reticulon 4 0.013331
OPTN optineurin 0.0130465
WNK1 WNK lysine deficient protein kinase 1 0.0129931
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.0123999
EEF1G eukaryotic translation elongation factor 1 gamma 0.0123014
EPHA4 EPH receptor A4 0.0121992
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.0121782
HMGB2 high mobility group box 2 0.0121725
RPL26 ribosomal protein L26 0.0121066
ARHGAP21 Rho GTPase activating protein 21 0.0121041
ACYP2 acylphosphatase 2, muscle type 0.0119595
KIF5B kinesin family member 5B 0.0118496
KTN1 kinectin 1 (kinesin receptor) 0.0118075
BCAP31 B-cell receptor-associated protein 31 0.0117948
PDIA4 protein disulfide isomerase family A, member 4 0.0117881
E2F7 E2F transcription factor 7 0.0117463
TNRC18 trinucleotide repeat containing 18 0.0117455
RPL14 ribosomal protein L14 0.0116409
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 0.0115831
LAMP2 lysosomal-associated membrane protein 2 0.011567
ARL15 ADP-ribosylation factor-like 15 0.0115343
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.0115185
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0115059
AKAP12 A kinase (PRKA) anchor protein 12 0.0114655
KLHL29 kelch-like family member 29 0.0113927
FAM219A family with sequence similarity 219, member A 0.0113809
CXXC1 CXXC finger protein 1 0.0112725
GNAS GNAS complex locus 0.0111648
PHLDA2 pleckstrin homology-like domain, family A, member 2 0.0110798
RPL12 ribosomal protein L12 0.0110399
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.0109383
C8ORF33 chromosome 8 open reading frame 33 0.010896
SELENOK selenoprotein K 0.0108705
CD99 CD99 molecule 0.0108218
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0107052
RPL13A ribosomal protein L13a 0.0107021
STOM stomatin 0.0106972
RPS3 ribosomal protein S3 0.0106528
WASL Wiskott-Aldrich syndrome-like 0.0106185
PLAUR plasminogen activator, urokinase receptor 0.0105675
SYAP1 synapse associated protein 1 0.0105398

decreased expression

Symbol Name Standardized Value
GPC6 glypican 6 -0.265711
EXT1 exostosin glycosyltransferase 1 -0.122165
CXCL8 chemokine (C-X-C motif) ligand 8 -0.114999
FRMD4A FERM domain containing 4A -0.101153
TRIO trio Rho guanine nucleotide exchange factor -0.0924158
RAI14 retinoic acid induced 14 -0.0918365
FNDC3B fibronectin type III domain containing 3B -0.0858675
NAMPT nicotinamide phosphoribosyltransferase -0.0830225
GLIS3 GLIS family zinc finger 3 -0.0820748
NDRG1 N-myc downstream regulated 1 -0.080642
SOD2 superoxide dismutase 2, mitochondrial -0.0742609
VIM vimentin -0.0718229
IGFBP3 insulin-like growth factor binding protein 3 -0.0708876
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0704518
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0619979
TSHZ2 teashirt zinc finger homeobox 2 -0.0590584
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0581191
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0553793
CD44 CD44 molecule (Indian blood group) -0.0535453
P3H2 prolyl 3-hydroxylase 2 -0.0523912
CP ceruloplasmin (ferroxidase) -0.0522752
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0513559
ASPH aspartate beta-hydroxylase -0.0506966
IARS1 isoleucyl-tRNA synthetase 1 -0.0504958
TXNRD1 thioredoxin reductase 1 -0.0503257
VCL vinculin -0.0497679
PBX1 pre-B-cell leukemia homeobox 1 -0.0488084
PLIN2 perilipin 2 -0.0480563
SMAD3 SMAD family member 3 -0.0475633
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0456725
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0452555
SPAG9 sperm associated antigen 9 -0.0445497
KYNU kynureninase -0.0444319
MAP1B microtubule-associated protein 1B -0.0443467
NRP2 neuropilin 2 -0.0440156
PALLD palladin, cytoskeletal associated protein -0.0428866
BIRC6 baculoviral IAP repeat containing 6 -0.0419892
PDE4D phosphodiesterase 4D, cAMP-specific -0.0419
RAB2A RAB2A, member RAS oncogene family -0.0417239
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0406592
COPA coatomer protein complex, subunit alpha -0.0401688
COG5 component of oligomeric golgi complex 5 -0.0399974
RAB1A RAB1A, member RAS oncogene family -0.0398082
RHEB Ras homolog enriched in brain -0.0396752
CALU calumenin -0.0387059
CA12 carbonic anhydrase XII -0.0385984
MX1 MX dynamin-like GTPase 1 -0.0385203
TPM1 tropomyosin 1 (alpha) -0.0383305
TMSB10 thymosin beta 10 -0.03717
NRIP1 nuclear receptor interacting protein 1 -0.0369333
DIAPH3 diaphanous-related formin 3 -0.0368874
VCAM1 vascular cell adhesion molecule 1 -0.0366839
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0361753
ANKRD17 ankyrin repeat domain 17 -0.0358393
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0350181
LPP LIM domain containing preferred translocation partner in lipoma -0.0348667
RNF213 ring finger protein 213 -0.0347397
PAX8 paired box 8 -0.0344743
RRBP1 ribosome binding protein 1 -0.0344592
MORF4L2 mortality factor 4 like 2 -0.034026
IRS2 insulin receptor substrate 2 -0.0338982
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0336188
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0335268
MARCHF6 membrane associated ring-CH-type finger 6 -0.0332748
UBE2H ubiquitin-conjugating enzyme E2H -0.0328895
DLG1 discs, large homolog 1 (Drosophila) -0.0326247
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0323581
CLINT1 clathrin interactor 1 -0.0318734
RRM2 ribonucleotide reductase M2 -0.0317753
STK17A serine/threonine kinase 17a -0.0316694
NFIB nuclear factor I/B -0.031593
STAT1 signal transducer and activator of transcription 1, 91kDa -0.031538
KPNB1 karyopherin (importin) beta 1 -0.0314278
NF1 neurofibromin 1 -0.0313617
UGCG UDP-glucose ceramide glucosyltransferase -0.0313163
SPDYA speedy/RINGO cell cycle regulator family member A -0.0311193
TNS3 tensin 3 -0.0310567
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.030849
ZBTB20 zinc finger and BTB domain containing 20 -0.0306927
POTEF POTE ankyrin domain family, member F -0.0302505
PTK2 protein tyrosine kinase 2 -0.0302075
PTBP3 polypyrimidine tract binding protein 3 -0.0300272
LDHA lactate dehydrogenase A -0.0292111
SBF2 SET binding factor 2 -0.0291002
EML4 echinoderm microtubule associated protein like 4 -0.0290635
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0288791
RAD51B RAD51 paralog B -0.0286368
FMNL2 formin-like 2 -0.0284873
NRP1 neuropilin 1 -0.0284863
LITAF lipopolysaccharide-induced TNF factor -0.0284707
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0284081
ITGAV integrin, alpha V -0.0282802
SQSTM1 sequestosome 1 -0.0282148
RPL35A ribosomal protein L35a -0.0280719
MTDH metadherin -0.0278662
CBX3 chromobox homolog 3 -0.0277098
MON2 MON2 homolog (S. cerevisiae) -0.0275758
LMAN1 lectin, mannose-binding, 1 -0.027437
ZFAND3 zinc finger, AN1-type domain 3 -0.0274182
UBC ubiquitin C -0.0274065