Idarubicin (hydrochloride)_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS2 ribosomal protein S2 0.0936493
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.081848
HIP1 huntingtin interacting protein 1 0.0661199
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0585828
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0538655
BCOR BCL6 corepressor 0.0531221
GSE1 Gse1 coiled-coil protein 0.0524635
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0441499
MACF1 microtubule-actin crosslinking factor 1 0.0435661
ARL15 ADP-ribosylation factor-like 15 0.0422318
FBXL7 F-box and leucine-rich repeat protein 7 0.0411187
FTH1 ferritin, heavy polypeptide 1 0.0410945
TNRC18 trinucleotide repeat containing 18 0.0401345
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0390027
EEF1G eukaryotic translation elongation factor 1 gamma 0.0386528
ARID1B AT rich interactive domain 1B (SWI1-like) 0.036147
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0347104
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0340533
CDR2 cerebellar degeneration-related protein 2, 62kDa 0.0333344
RAD51B RAD51 paralog B 0.0329729
HDGFL3 HDGF like 3 0.0315312
ERBIN erbb2 interacting protein 0.0308432
COL27A1 collagen, type XXVII, alpha 1 0.0308141
SFTPA2 surfactant protein A2 0.0305797
RRM2 ribonucleotide reductase M2 0.0304554
APLP2 amyloid beta (A4) precursor-like protein 2 0.0303735
NTN1 netrin 1 0.0297272
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0295447
TCF12 transcription factor 12 0.0294882
IRF3 interferon regulatory factor 3 0.0294249
HOXA3 homeobox A3 0.0291656
MYH10 myosin, heavy chain 10, non-muscle 0.0287474
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0283727
RPL4 ribosomal protein L4 0.02837
KLHL29 kelch-like family member 29 0.0278398
FUS FUS RNA binding protein 0.0269522
INPP5A inositol polyphosphate-5-phosphatase, 40kDa 0.0267914
GNAS GNAS complex locus 0.0267359
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0260955
TPM3 tropomyosin 3 0.025875
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0258607
CUX1 cut-like homeobox 1 0.0258328
RRAS2 related RAS viral (r-ras) oncogene homolog 2 0.0254807
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0254668
YBX3 Y box binding protein 3 0.0253192
ARID1A AT rich interactive domain 1A (SWI-like) 0.0241887
KIF26B kinesin family member 26B 0.0241887
REST RE1-silencing transcription factor 0.024106
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.0240495
PHF21B PHD finger protein 21B 0.0240357
ALG11 ALG11, alpha-1,2-mannosyltransferase 0.0237901
TAC4 tachykinin 4 (hemokinin) 0.0237679
RPS6 ribosomal protein S6 0.0235207
NIN ninein (GSK3B interacting protein) 0.0234892
POM121 POM121 transmembrane nucleoporin 0.0233875
SNED1 sushi, nidogen and EGF-like domains 1 0.023291
SYAP1 synapse associated protein 1 0.0231123
FNBP1 formin binding protein 1 0.0229922
CLSPN claspin 0.0229746
NRG2 neuregulin 2 0.0228776
PPME1 protein phosphatase methylesterase 1 0.0228631
UTRN utrophin 0.0227542
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0225919
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0225408
NECTIN2 nectin cell adhesion molecule 2 0.0224642
LMTK2 lemur tyrosine kinase 2 0.0224628
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0224566
FGFR1 fibroblast growth factor receptor 1 0.0223519
CECR2 cat eye syndrome chromosome region, candidate 2 0.0220894
TOP1 topoisomerase (DNA) I 0.0220502
GRK5 G protein-coupled receptor kinase 5 0.0219823
YBX1 Y box binding protein 1 0.0218886
SSBP3 single stranded DNA binding protein 3 0.0218583
RPLP1 ribosomal protein, large, P1 0.0218105
PHF21A PHD finger protein 21A 0.0218003
EIF4H eukaryotic translation initiation factor 4H 0.0217642
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 0.0217281
DOCK3 dedicator of cytokinesis 3 0.0216433
TCF7 transcription factor 7 (T-cell specific, HMG-box) 0.0216309
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0214961
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0213407
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0212405
TASOR2 transcription activation suppressor family member 2 0.0212019
PDE3B phosphodiesterase 3B, cGMP-inhibited 0.0211814
CYTH3 cytohesin 3 0.0211228
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0211029
CHD3 chromodomain helicase DNA binding protein 3 0.0210807
IQSEC1 IQ motif and Sec7 domain 1 0.0209966
ACOT7 acyl-CoA thioesterase 7 0.0209754
PITPNA phosphatidylinositol transfer protein, alpha 0.0208907
BBX bobby sox homolog (Drosophila) 0.0207283
CYTH1 cytohesin 1 0.020665
FGFR2 fibroblast growth factor receptor 2 0.0206164
MTREX Mtr4 exosome RNA helicase 0.0206065
ZNF345 zinc finger protein 345 0.0205729
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0205579
CALR calreticulin 0.0205557
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0204976
HMGN2 high mobility group nucleosomal binding domain 2 0.0201582
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0200976

decreased expression

Symbol Name Standardized Value
CADM2 cell adhesion molecule 2 -0.211091
MEST mesoderm specific transcript -0.209609
VIM vimentin -0.185109
PRKG1 protein kinase, cGMP-dependent, type I -0.135987
PTMA prothymosin, alpha -0.0952233
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0869399
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0860002
NFIB nuclear factor I/B -0.0852798
LDHA lactate dehydrogenase A -0.0801535
TPK1 thiamin pyrophosphokinase 1 -0.0794953
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0786627
PEG10 paternally expressed 10 -0.0742526
NDRG1 N-myc downstream regulated 1 -0.0660391
MEOX2 mesenchyme homeobox 2 -0.064968
ENO1 enolase 1, (alpha) -0.0639188
CENPF centromere protein F, 350/400kDa -0.0637997
RPL35A ribosomal protein L35a -0.0629857
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0593865
MT2A metallothionein 2A -0.0583808
FNDC3B fibronectin type III domain containing 3B -0.049849
RPS8 ribosomal protein S8 -0.0490912
DLG1 discs, large homolog 1 (Drosophila) -0.0489043
HMGA2 high mobility group AT-hook 2 -0.047891
ZEB1 zinc finger E-box binding homeobox 1 -0.0468564
RPL34 ribosomal protein L34 -0.0452252
MYOF myoferlin -0.0448326
POTEF POTE ankyrin domain family, member F -0.0446162
PDE4D phosphodiesterase 4D, cAMP-specific -0.0437487
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0436463
RPS25 ribosomal protein S25 -0.0431128
ACTG1 actin gamma 1 -0.0420601
FTL ferritin, light polypeptide -0.0399317
TTC3 tetratricopeptide repeat domain 3 -0.0390896
TMSB10 thymosin beta 10 -0.0384417
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0368827
RPS5 ribosomal protein S5 -0.0367973
PICALM phosphatidylinositol binding clathrin assembly protein -0.0366025
PKM pyruvate kinase, muscle -0.0360391
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0354727
SLC38A2 solute carrier family 38, member 2 -0.0348502
VDAC1 voltage-dependent anion channel 1 -0.0346953
RPS13 ribosomal protein S13 -0.0344707
MTDH metadherin -0.0339475
EEF2 eukaryotic translation elongation factor 2 -0.0338924
DEK DEK proto-oncogene -0.0337383
TPM4 tropomyosin 4 -0.0331464
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0330401
HMGA1 high mobility group AT-hook 1 -0.0329581
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0325667
PGK1 phosphoglycerate kinase 1 -0.0323219
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0321486
RPS23 ribosomal protein S23 -0.0320363
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0310437
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0303601
CDK6 cyclin-dependent kinase 6 -0.0300535
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0298578
ASPH aspartate beta-hydroxylase -0.0293244
EGFR epidermal growth factor receptor -0.0282907
CENPE centromere protein E, 312kDa -0.0282055
AFF4 AF4/FMR2 family, member 4 -0.0279036
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0277591
RAB7A RAB7A, member RAS oncogene family -0.0277455
NF1 neurofibromin 1 -0.0275277
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0275045
LPP LIM domain containing preferred translocation partner in lipoma -0.027388
SREBF2 sterol regulatory element binding transcription factor 2 -0.0273699
RPS19 ribosomal protein S19 -0.0273519
SNX14 sorting nexin 14 -0.0269766
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0268283
S100A9 S100 calcium binding protein A9 -0.0268093
COPA coatomer protein complex, subunit alpha -0.0267431
FLNB filamin B, beta -0.0266756
UBE3C ubiquitin protein ligase E3C -0.0265186
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0262264
SOX4 SRY (sex determining region Y)-box 4 -0.0261113
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0261068
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0259659
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0256728
SCFD1 sec1 family domain containing 1 -0.0256515
SPPL3 signal peptide peptidase like 3 -0.0255788
PRELID2 PRELI domain containing 2 -0.0253169
ECT2 epithelial cell transforming 2 -0.0253053
RPL23 ribosomal protein L23 -0.0252332
IARS1 isoleucyl-tRNA synthetase 1 -0.0251454
SEPTIN11 septin 11 -0.0249042
RPL7A ribosomal protein L7a -0.0246856
RPL9 ribosomal protein L9 -0.0245145
INTS6 integrator complex subunit 6 -0.0243699
COL5A2 collagen, type V, alpha 2 -0.0241211
FN1 fibronectin 1 -0.024036
RPS24 ribosomal protein S24 -0.0238617
KAZN kazrin, periplakin interacting protein -0.0238371
TUBB tubulin, beta class I -0.0236958
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0234282
BRWD1 bromodomain and WD repeat domain containing 1 -0.0233795
BTBD3 BTB (POZ) domain containing 3 -0.0233398
PCM1 pericentriolar material 1 -0.0232569
SEC31A SEC31 homolog A (S. cerevisiae) -0.0231715
BIRC6 baculoviral IAP repeat containing 6 -0.0231548
FAM13A family with sequence similarity 13, member A -0.0231282