Idarubicin (hydrochloride)_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.122188
TCN1 transcobalamin I (vitamin B12 binding protein, R binder family) 0.107448
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0741735
RPS2 ribosomal protein S2 0.0731056
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0683671
SRCIN1 SRC kinase signaling inhibitor 1 0.0635404
EXT1 exostosin glycosyltransferase 1 0.0630861
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0560469
PRRC2B proline-rich coiled-coil 2B 0.0516114
SET SET nuclear proto-oncogene 0.0497602
HSPA8 heat shock 70kDa protein 8 0.047959
ERBB2 erb-b2 receptor tyrosine kinase 2 0.0468901
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0466817
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0431906
RPS6 ribosomal protein S6 0.0425199
YBX1 Y box binding protein 1 0.0416096
DUSP16 dual specificity phosphatase 16 0.0414982
TPM3 tropomyosin 3 0.0393261
PNN pinin, desmosome associated protein 0.0386385
NRIP1 nuclear receptor interacting protein 1 0.0384777
EPAS1 endothelial PAS domain protein 1 0.0358582
GPHN gephyrin 0.0357196
RPL4 ribosomal protein L4 0.0347761
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0336884
DSPP dentin sialophosphoprotein 0.0328938
DOCK5 dedicator of cytokinesis 5 0.0318609
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0317589
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0314839
FNDC3B fibronectin type III domain containing 3B 0.0311178
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0304019
NTN4 netrin 4 0.0301669
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0298251
EPHA4 EPH receptor A4 0.0298132
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0294197
CLTC clathrin, heavy chain (Hc) 0.0287244
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0286963
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0284176
RPL13A ribosomal protein L13a 0.0279886
PRRC2C proline-rich coiled-coil 2C 0.0279365
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0278347
WNK1 WNK lysine deficient protein kinase 1 0.0277977
SMYD3 SET and MYND domain containing 3 0.0274432
FNDC3A fibronectin type III domain containing 3A 0.0270794
SLFN5 schlafen family member 5 0.0265262
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0261366
NRP1 neuropilin 1 0.0256431
MBD4 methyl-CpG binding domain protein 4 0.0253571
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0249902
RSL1D1 ribosomal L1 domain containing 1 0.0242815
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0242745
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0239901
GNAS GNAS complex locus 0.0237613
TFF1 trefoil factor 1 0.0234217
TUBA1B tubulin, alpha 1b 0.0234041
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0232034
SKA2 spindle and kinetochore associated complex subunit 2 0.0227126
MED13L mediator complex subunit 13-like 0.0226705
TXNRD1 thioredoxin reductase 1 0.0226144
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0225128
MLEC malectin 0.0224672
SMC4 structural maintenance of chromosomes 4 0.0220583
IGF2 insulin-like growth factor 2 0.0220109
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0218234
KIF5B kinesin family member 5B 0.0217344
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0216688
SMAD3 SMAD family member 3 0.0215735
RND3 Rho family GTPase 3 0.021471
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0214702
SYAP1 synapse associated protein 1 0.0214281
HIPK2 homeodomain interacting protein kinase 2 0.0214218
RBBP6 retinoblastoma binding protein 6 0.0214146
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0214145
YBX3 Y box binding protein 3 0.0213696
CANX calnexin 0.0212545
PTMA prothymosin, alpha 0.0210574
HMGN2 high mobility group nucleosomal binding domain 2 0.0210501
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.020974
SOX9 SRY (sex determining region Y)-box 9 0.0208532
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0206897
ELL2 elongation factor, RNA polymerase II, 2 0.0204417
CXCL3 chemokine (C-X-C motif) ligand 3 0.0204215
MT2A metallothionein 2A 0.0204124
TTC17 tetratricopeptide repeat domain 17 0.0203691
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0203612
SEPTIN9 septin 9 0.0201998
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 0.0201786
STS steroid sulfatase (microsomal), isozyme S 0.0200641
RPS12 ribosomal protein S12 0.02001
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0199945
MDK midkine (neurite growth-promoting factor 2) 0.0197792
MYO10 myosin X 0.01976
FGB fibrinogen beta chain 0.0197345
MYO1B myosin IB 0.0194291
TMSB4X thymosin beta 4, X-linked 0.0193226
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0191478
RPS17 ribosomal protein S17 0.0190724
FARS2 phenylalanyl-tRNA synthetase 2, mitochondrial 0.0190589
RPS19 ribosomal protein S19 0.0189188
NAP1L1 nucleosome assembly protein 1-like 1 0.0187962
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0186576

decreased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 -0.206777
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.168567
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.133901
ACACA acetyl-CoA carboxylase alpha -0.128386
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.098888
LASP1 LIM and SH3 protein 1 -0.0952925
FBXL20 F-box and leucine-rich repeat protein 20 -0.0876088
VMP1 vacuole membrane protein 1 -0.0713549
ASPH aspartate beta-hydroxylase -0.0675542
FADS2 fatty acid desaturase 2 -0.0597678
NDRG1 N-myc downstream regulated 1 -0.0590845
TMSB10 thymosin beta 10 -0.0580647
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0552348
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0506037
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0491831
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0490431
POTEF POTE ankyrin domain family, member F -0.047893
TMEM123 transmembrane protein 123 -0.046045
PGK1 phosphoglycerate kinase 1 -0.0459035
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 -0.0458643
RAB22A RAB22A, member RAS oncogene family -0.0442674
JMJD1C jumonji domain containing 1C -0.0430983
UBE2H ubiquitin-conjugating enzyme E2H -0.0425666
PBX1 pre-B-cell leukemia homeobox 1 -0.042234
RPL23 ribosomal protein L23 -0.0407928
ZNF652 zinc finger protein 652 -0.0399788
RAB6A RAB6A, member RAS oncogene family -0.039092
DNAH14 dynein, axonemal, heavy chain 14 -0.0388385
LDHA lactate dehydrogenase A -0.0372042
INSIG1 insulin induced gene 1 -0.036627
ITCH itchy E3 ubiquitin protein ligase -0.0365403
MCL1 myeloid cell leukemia 1 -0.0362349
GRB7 growth factor receptor-bound protein 7 -0.0362018
TOM1L1 target of myb1 (chicken)-like 1 -0.0355109
ZBTB20 zinc finger and BTB domain containing 20 -0.0349688
ESYT2 extended synaptotagmin-like protein 2 -0.0342727
EHMT1 euchromatic histone-lysine N-methyltransferase 1 -0.0342036
CATSPERB catsper channel auxiliary subunit beta -0.0336519
DST dystonin -0.0335603
KRT19 keratin 19, type I -0.0332908
BCAS1 breast carcinoma amplified sequence 1 -0.032371
TRPS1 trichorhinophalangeal syndrome I -0.0322084
LMNA lamin A/C -0.032152
ACBD3 acyl-CoA binding domain containing 3 -0.0318926
FASN fatty acid synthase -0.0308499
KDM5B lysine (K)-specific demethylase 5B -0.0304562
LPP LIM domain containing preferred translocation partner in lipoma -0.0299566
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 -0.0299563
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0291649
TBL1X transducin (beta)-like 1X-linked -0.0288852
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0284536
IL1RAPL2 interleukin 1 receptor accessory protein-like 2 -0.0280971
ANKRD12 ankyrin repeat domain 12 -0.0275507
SREBF2 sterol regulatory element binding transcription factor 2 -0.0272735
TP53INP2 tumor protein p53 inducible nuclear protein 2 -0.0272399
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0268777
KIF16B kinesin family member 16B -0.0266979
RIMS2 regulating synaptic membrane exocytosis 2 -0.0266484
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0266269
ARHGAP12 Rho GTPase activating protein 12 -0.026151
KRT8 keratin 8, type II -0.0258816
CCNI cyclin I -0.0256267
CEP250 centrosomal protein 250kDa -0.0255393
DENND1B DENN/MADD domain containing 1B -0.0251872
AKAP13 A kinase (PRKA) anchor protein 13 -0.0245037
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0242962
MIPOL1 mirror-image polydactyly 1 -0.0242314
CCSER1 coiled-coil serine-rich protein 1 -0.0241374
MIEN1 migration and invasion enhancer 1 -0.0239732
SRPK2 SRSF protein kinase 2 -0.0239366
TMEM41B transmembrane protein 41B -0.0238283
PTPRK protein tyrosine phosphatase, receptor type, K -0.0233488
RESF1 retroelement silencing factor 1 -0.0233158
MYO5B myosin VB -0.0232401
MSMO1 methylsterol monooxygenase 1 -0.0231993
CD164 CD164 molecule, sialomucin -0.0231286
IDI1 isopentenyl-diphosphate delta isomerase 1 -0.0229158
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0228833
YPEL2 yippee-like 2 (Drosophila) -0.0228654
BRWD1 bromodomain and WD repeat domain containing 1 -0.0226529
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0224682
PKM pyruvate kinase, muscle -0.0223741
KLC1 kinesin light chain 1 -0.022133
SQLE squalene epoxidase -0.0221171
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 -0.0219717
FDPS farnesyl diphosphate synthase -0.0219084
AHCTF1 AT hook containing transcription factor 1 -0.0219029
ESRP1 epithelial splicing regulatory protein 1 -0.0216375
WASF2 WAS protein family, member 2 -0.0215338
TMEM135 transmembrane protein 135 -0.0214488
KRT7 keratin 7, type II -0.0212562
GRB10 growth factor receptor-bound protein 10 -0.0212494
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0212437
ANKRD36C ankyrin repeat domain 36C -0.0212349
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0212047
TAOK3 TAO kinase 3 -0.0209243
COPA coatomer protein complex, subunit alpha -0.0208242
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0206868
S100P S100 calcium binding protein P -0.0203028
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0202653