Idarubicin (hydrochloride)_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0967837
WNK1 WNK lysine deficient protein kinase 1 0.060754
KMT2C lysine (K)-specific methyltransferase 2C 0.0603552
NCOR1 nuclear receptor corepressor 1 0.0594578
UBAP2 ubiquitin associated protein 2 0.0564382
SRSF4 serine/arginine-rich splicing factor 4 0.0563602
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0544522
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0519296
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0509148
PRRC2C proline-rich coiled-coil 2C 0.0508324
CENPF centromere protein F, 350/400kDa 0.0503503
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0498849
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0485221
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0480691
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0458729
RPS6 ribosomal protein S6 0.0456477
PNN pinin, desmosome associated protein 0.0453979
JMJD1C jumonji domain containing 1C 0.0449398
RCOR1 REST corepressor 1 0.0438824
PCBP2 poly(rC) binding protein 2 0.0438009
MACF1 microtubule-actin crosslinking factor 1 0.0432887
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0428775
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0426896
RPS2 ribosomal protein S2 0.0416055
COL5A2 collagen, type V, alpha 2 0.041433
SIK3 SIK family kinase 3 0.0413756
DST dystonin 0.0411819
TRIP12 thyroid hormone receptor interactor 12 0.0409849
ZNF608 zinc finger protein 608 0.0392744
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0385222
BPTF bromodomain PHD finger transcription factor 0.0371923
SRRM1 serine/arginine repetitive matrix 1 0.0369768
CSNK1G1 casein kinase 1, gamma 1 0.0363747
BCLAF1 BCL2-associated transcription factor 1 0.0361531
SOX5 SRY (sex determining region Y)-box 5 0.0360307
TPM3 tropomyosin 3 0.035878
BRD4 bromodomain containing 4 0.0355615
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0354638
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0354303
LRP6 low density lipoprotein receptor-related protein 6 0.0352298
PGAM4 phosphoglycerate mutase family member 4 0.0351193
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.034968
CAPZB capping protein (actin filament) muscle Z-line, beta 0.0346502
GPBP1 GC-rich promoter binding protein 1 0.0343568
AUTS2 autism susceptibility candidate 2 0.0341791
FNBP1 formin binding protein 1 0.0340614
JARID2 jumonji, AT rich interactive domain 2 0.033933
EEF2 eukaryotic translation elongation factor 2 0.0339223
KTN1 kinectin 1 (kinesin receptor) 0.0338804
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0337506
WLS wntless Wnt ligand secretion mediator 0.033487
SLIT2 slit homolog 2 (Drosophila) 0.0334654
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0329923
BBX bobby sox homolog (Drosophila) 0.032635
PDS5A PDS5 cohesin associated factor A 0.0316671
ZRANB3 zinc finger, RAN-binding domain containing 3 0.0314499
JUN jun proto-oncogene 0.0311346
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.0309908
TCF12 transcription factor 12 0.0305692
SETD5 SET domain containing 5 0.0304764
PCM1 pericentriolar material 1 0.0304346
KDM6A lysine (K)-specific demethylase 6A 0.0299228
CDK13 cyclin-dependent kinase 13 0.0296738
MKI67 marker of proliferation Ki-67 0.0293023
HELLS helicase, lymphoid-specific 0.0291451
ZCCHC7 zinc finger, CCHC domain containing 7 0.0291261
NBEAL1 neurobeachin-like 1 0.0290082
ATXN2 ataxin 2 0.0289652
MMS22L MMS22-like, DNA repair protein 0.0288427
APLP2 amyloid beta (A4) precursor-like protein 2 0.0287472
HSPA8 heat shock 70kDa protein 8 0.0281213
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.027996
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0279791
ZNF609 zinc finger protein 609 0.0278529
EXOC4 exocyst complex component 4 0.0278435
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0278387
AKAP12 A kinase (PRKA) anchor protein 12 0.02777
SETD2 SET domain containing 2 0.0276228
KDM2A lysine (K)-specific demethylase 2A 0.0275618
ASXL2 additional sex combs like transcriptional regulator 2 0.0275149
SSH2 slingshot protein phosphatase 2 0.0274042
TOB2 transducer of ERBB2, 2 0.0273237
RANBP17 RAN binding protein 17 0.0271265
N4BP2L2 NEDD4 binding protein 2-like 2 0.0266366
PAPOLA poly(A) polymerase alpha 0.0264698
ATXN7 ataxin 7 0.0263991
PHF21A PHD finger protein 21A 0.026308
GOLGB1 golgin B1 0.0261812
MED13 mediator complex subunit 13 0.0260823
KMT2E lysine (K)-specific methyltransferase 2E 0.026078
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0259748
HP1BP3 heterochromatin protein 1, binding protein 3 0.0258017
TTC28 tetratricopeptide repeat domain 28 0.0256715
ESYT2 extended synaptotagmin-like protein 2 0.0252821
SRPK2 SRSF protein kinase 2 0.0252612
NRDC nardilysin convertase 0.0252152
GYS1 glycogen synthase 1 (muscle) 0.0252032
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0251937
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0251668
SYAP1 synapse associated protein 1 0.0251581

decreased expression

Symbol Name Standardized Value
NPAS3 neuronal PAS domain protein 3 -0.174045
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.11003
IFI6 interferon, alpha-inducible protein 6 -0.0901843
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0885612
ACTG1 actin gamma 1 -0.0873548
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0856764
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0850743
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0780445
RPS24 ribosomal protein S24 -0.0691595
ADGRG6 adhesion G protein-coupled receptor G6 -0.0679009
RAD51B RAD51 paralog B -0.0665815
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0661312
VDAC1 voltage-dependent anion channel 1 -0.0655974
RPL11 ribosomal protein L11 -0.0641865
TENM3 teneurin transmembrane protein 3 -0.0621607
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0608607
SHROOM3 shroom family member 3 -0.058756
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0572455
LDHA lactate dehydrogenase A -0.0568282
H1-0 H1.0 linker histone -0.0566014
RPS8 ribosomal protein S8 -0.0562293
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0543686
KDM3A lysine (K)-specific demethylase 3A -0.0522486
PGK1 phosphoglycerate kinase 1 -0.052224
B2M beta-2-microglobulin -0.0519181
TPT1 tumor protein, translationally-controlled 1 -0.0518395
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0494746
RPLP0 ribosomal protein, large, P0 -0.0490081
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0488713
RPS4X ribosomal protein S4, X-linked -0.0484767
RPL26 ribosomal protein L26 -0.046319
RPL34 ribosomal protein L34 -0.0457349
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.045321
ZNF217 zinc finger protein 217 -0.0447673
LOC112694756 uncharaterized LOC112694756 -0.0430421
TMSB10 thymosin beta 10 -0.0421199
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0416616
RPL31 ribosomal protein L31 -0.0414193
CADM2 cell adhesion molecule 2 -0.0413898
WDR45B WD repeat domain 45B -0.0402175
GRID2 glutamate receptor, ionotropic, delta 2 -0.0394728
FAM162A family with sequence similarity 162, member A -0.0390269
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.03749
MARCHF6 membrane associated ring-CH-type finger 6 -0.0372023
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0369473
GJA1 gap junction protein, alpha 1, 43kDa -0.0368373
MYL12B myosin, light chain 12B, regulatory -0.0362559
PUM2 pumilio RNA-binding family member 2 -0.0351918
RPL35A ribosomal protein L35a -0.0348763
ARB2A ARB2 cotranscriptional regulator A -0.0348402
NAP1L1 nucleosome assembly protein 1-like 1 -0.0344254
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0343087
ISG15 ISG15 ubiquitin-like modifier -0.0341097
ENO1 enolase 1, (alpha) -0.0339725
ZFP36L1 ZFP36 ring finger protein-like 1 -0.033271
ANXA2 annexin A2 -0.0327956
RPL23 ribosomal protein L23 -0.0327307
KPNB1 karyopherin (importin) beta 1 -0.0326977
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0326634
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0316747
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0316456
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0309174
RPS3 ribosomal protein S3 -0.0307388
RPLP1 ribosomal protein, large, P1 -0.030657
SSB Sjogren syndrome antigen B (autoantigen La) -0.0299266
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.029865
RPL38 ribosomal protein L38 -0.0294007
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0293726
RPL37A ribosomal protein L37a -0.0291469
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0287659
TXNRD1 thioredoxin reductase 1 -0.0285629
CDH18 cadherin 18, type 2 -0.0283158
MT2A metallothionein 2A -0.0281164
ZNF770 zinc finger protein 770 -0.028043
EFNA5 ephrin-A5 -0.0279673
LMAN1 lectin, mannose-binding, 1 -0.0272996
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 -0.0272029
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0268296
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0266771
XPO7 exportin 7 -0.026502
RSL1D1 ribosomal L1 domain containing 1 -0.0261828
RPL9 ribosomal protein L9 -0.0260622
HMGB1 high mobility group box 1 -0.025993
PTMA prothymosin, alpha -0.0258465
SLF1 SMC5-SMC6 complex localization factor 1 -0.0258454
RPS27A ribosomal protein S27a -0.0258302
RPL36 ribosomal protein L36 -0.0257067
RPS19 ribosomal protein S19 -0.025549
SEPTIN7 septin 7 -0.0254167
RAD21 RAD21 homolog (S. pombe) -0.0249829
CCNI cyclin I -0.0249769
RPS28 ribosomal protein S28 -0.0249332
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0246808
ZNF33A zinc finger protein 33A -0.0246695
SOX2 SRY (sex determining region Y)-box 2 -0.0243628
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0243143
RPS29 ribosomal protein S29 -0.0241326
HLA-C major histocompatibility complex, class I, C -0.023923
CAVIN1 caveolae associated protein 1 -0.0238025
PDE4D phosphodiesterase 4D, cAMP-specific -0.0235545