Idarubicin (hydrochloride)_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VGF VGF nerve growth factor inducible 0.280377
PTCHD4 patched domain containing 4 0.131888
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0986421
GDF15 growth differentiation factor 15 0.0932828
AKAP12 A kinase (PRKA) anchor protein 12 0.0930167
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0839857
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0799292
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0731734
NAMPT nicotinamide phosphoribosyltransferase 0.0664574
FMN1 formin 1 0.0655671
PDIA4 protein disulfide isomerase family A, member 4 0.0640204
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0637003
IGFBP5 insulin-like growth factor binding protein 5 0.0594438
KDM5B lysine (K)-specific demethylase 5B 0.0556463
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0533214
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0530766
IGFBP3 insulin-like growth factor binding protein 3 0.0446195
SFTPA2 surfactant protein A2 0.0425874
WSB1 WD repeat and SOCS box containing 1 0.0407271
CD109 CD109 molecule 0.0395003
CANX calnexin 0.0393599
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0391739
TIMP3 TIMP metallopeptidase inhibitor 3 0.0384998
HLA-E major histocompatibility complex, class I, E 0.0372459
JUN jun proto-oncogene 0.035003
FRMD4A FERM domain containing 4A 0.0336205
SDC2 syndecan 2 0.0333308
RGS12 regulator of G-protein signaling 12 0.0310914
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0310574
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.030743
HMGA2 high mobility group AT-hook 2 0.0299627
HLA-B major histocompatibility complex, class I, B 0.029401
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0283528
PTPRG protein tyrosine phosphatase, receptor type, G 0.0280116
RBM39 RNA binding motif protein 39 0.0279877
EIF4H eukaryotic translation initiation factor 4H 0.0276702
CALR calreticulin 0.0270153
ZMAT3 zinc finger, matrin-type 3 0.0257927
EGR1 early growth response 1 0.0252742
NFE2L1 nuclear factor, erythroid 2-like 1 0.0249286
ITGB8 integrin, beta 8 0.0247981
ZC3H7A zinc finger CCCH-type containing 7A 0.0245983
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0244603
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0244447
RPS2 ribosomal protein S2 0.0242305
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0241078
GOLGA4 golgin A4 0.0237981
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0236846
LRRC23 leucine rich repeat containing 23 0.0236573
PARVB parvin, beta 0.0234681
IQGAP1 IQ motif containing GTPase activating protein 1 0.0234214
TEX14 testis expressed 14 0.0232908
STXBP1 syntaxin binding protein 1 0.0227387
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.02264
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.022619
GCC2 GRIP and coiled-coil domain containing 2 0.0225514
ERRFI1 ERBB receptor feedback inhibitor 1 0.0225009
SERINC5 serine incorporator 5 0.0223597
IFRD1 interferon-related developmental regulator 1 0.0216706
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0213455
BZW1 basic leucine zipper and W2 domains 1 0.021114
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0207889
ELL2 elongation factor, RNA polymerase II, 2 0.0207605
RRM2B ribonucleotide reductase M2 B (TP53 inducible) 0.0201071
PRRC2C proline-rich coiled-coil 2C 0.0200704
BCL6 B-cell CLL/lymphoma 6 0.0200448
BHLHE40 basic helix-loop-helix family, member e40 0.01978
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.0193375
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0192996
A2M alpha-2-macroglobulin 0.0192862
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0191156
GTF2B general transcription factor IIB 0.0189519
TAFA2 TAFA chemokine like family member 2 0.0189076
RAB7A RAB7A, member RAS oncogene family 0.0188821
TPM3 tropomyosin 3 0.0188501
PLK2 polo-like kinase 2 0.0187921
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.0187803
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.0187345
SVIL supervillin 0.0185075
SEC24A SEC24 family member A 0.0182309
FTH1 ferritin, heavy polypeptide 1 0.018228
KDM7A lysine (K)-specific demethylase 7A 0.0180134
SSH1 slingshot protein phosphatase 1 0.0179464
HLA-A major histocompatibility complex, class I, A 0.0178595
YBX3 Y box binding protein 3 0.0176325
EP300 E1A binding protein p300 0.0175974
SOX4 SRY (sex determining region Y)-box 4 0.0174914
GOLGB1 golgin B1 0.0173516
EFR3B EFR3 homolog B (S. cerevisiae) 0.0172615
VCL vinculin 0.0172431
PI15 peptidase inhibitor 15 0.0171514
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0170894
TRA2A transformer 2 alpha homolog (Drosophila) 0.0170755
CLIP1 CAP-GLY domain containing linker protein 1 0.0170422
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.017038
RB1CC1 RB1-inducible coiled-coil 1 0.0168406
FBXO7 F-box protein 7 0.0164767
IL1RAP interleukin 1 receptor accessory protein 0.0164552
MXI1 MAX interactor 1, dimerization protein 0.0163646
VMP1 vacuole membrane protein 1 0.0162539

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.236836
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.171225
FN1 fibronectin 1 -0.164795
NLGN1 neuroligin 1 -0.128687
CENPF centromere protein F, 350/400kDa -0.113673
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0959306
NAV2 neuron navigator 2 -0.0952484
VIM vimentin -0.0777909
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0753969
POTEF POTE ankyrin domain family, member F -0.0731171
ASPH aspartate beta-hydroxylase -0.0726681
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0648466
TOP2A topoisomerase (DNA) II alpha 170kDa -0.062204
TMSB10 thymosin beta 10 -0.0600069
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0585011
NDRG1 N-myc downstream regulated 1 -0.057927
TAGLN2 transgelin 2 -0.0561212
MACROD2 MACRO domain containing 2 -0.0539354
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0502359
TMEM178B transmembrane protein 178B -0.0494286
PRELID2 PRELI domain containing 2 -0.0477656
MT1X metallothionein 1X -0.0476187
NAV1 neuron navigator 1 -0.0472971
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0466367
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0464732
CDK14 cyclin-dependent kinase 14 -0.0461229
PTK2 protein tyrosine kinase 2 -0.0449894
CHSY1 chondroitin sulfate synthase 1 -0.0431097
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0424518
PCDH7 protocadherin 7 -0.0415148
ACTG1 actin gamma 1 -0.0413068
SRPK2 SRSF protein kinase 2 -0.0403933
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0394753
MEF2A myocyte enhancer factor 2A -0.0394171
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0383494
PDE4D phosphodiesterase 4D, cAMP-specific -0.0382182
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 -0.0377397
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0369951
ATXN1 ataxin 1 -0.0360711
LOC112694756 uncharaterized LOC112694756 -0.035945
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.035562
MKI67 marker of proliferation Ki-67 -0.0347398
CD44 CD44 molecule (Indian blood group) -0.0338256
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0322574
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0322447
NPAS2 neuronal PAS domain protein 2 -0.0320446
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0317965
ICAM1 intercellular adhesion molecule 1 -0.0314394
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0310157
CALD1 caldesmon 1 -0.0309981
TNNC1 troponin C type 1 (slow) -0.0309584
CAV1 caveolin 1, caveolae protein, 22kDa -0.0305165
IFITM3 interferon induced transmembrane protein 3 -0.0303302
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0300859
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0300385
ANKRD12 ankyrin repeat domain 12 -0.0300016
HMGA1 high mobility group AT-hook 1 -0.0298158
NBAS neuroblastoma amplified sequence -0.0295974
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0294126
DCT dopachrome tautomerase -0.0292355
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0292255
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0288784
SGO2 shugoshin 2 -0.0288441
LEF1 lymphoid enhancer-binding factor 1 -0.0288206
BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 -0.0284399
SMC4 structural maintenance of chromosomes 4 -0.0284202
SCLT1 sodium channel and clathrin linker 1 -0.0282617
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0280683
NEGR1 neuronal growth regulator 1 -0.0279756
NHSL1 NHS-like 1 -0.0277874
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0276185
IFITM1 interferon induced transmembrane protein 1 -0.0274674
MBNL1 muscleblind-like splicing regulator 1 -0.0274421
CABIN1 calcineurin binding protein 1 -0.027394
LDHA lactate dehydrogenase A -0.0271977
TPD52 tumor protein D52 -0.0270939
RPL19 ribosomal protein L19 -0.0269901
CENPE centromere protein E, 312kDa -0.0268209
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.026377
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 -0.0262341
SEPTIN7 septin 7 -0.0262017
PGK1 phosphoglycerate kinase 1 -0.0261822
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 -0.0258416
PDE4B phosphodiesterase 4B, cAMP-specific -0.0257575
MAML2 mastermind-like 2 (Drosophila) -0.0254086
CHD1L chromodomain helicase DNA binding protein 1-like -0.02493
SMAD3 SMAD family member 3 -0.0245685
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0245591
EHBP1 EH domain binding protein 1 -0.0245305
TRIM2 tripartite motif containing 2 -0.0245222
IQGAP3 IQ motif containing GTPase activating protein 3 -0.0244413
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.024314
RFX7 regulatory factor X, 7 -0.024244
SETD5 SET domain containing 5 -0.0241089
PHC2 polyhomeotic homolog 2 (Drosophila) -0.0239494
VDAC1 voltage-dependent anion channel 1 -0.0238936
ACTN4 actinin, alpha 4 -0.0238344
KMT2C lysine (K)-specific methyltransferase 2C -0.0235876
KIF14 kinesin family member 14 -0.0231498
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0231289