Idarubicin (hydrochloride)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.101211
RPS6 ribosomal protein S6 0.0662259
PLAT plasminogen activator, tissue 0.0601873
VCL vinculin 0.0490806
TIMP3 TIMP metallopeptidase inhibitor 3 0.046765
IGFBP5 insulin-like growth factor binding protein 5 0.0432501
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0417147
COL4A5 collagen, type IV, alpha 5 0.0375003
SLIT2 slit homolog 2 (Drosophila) 0.0372082
CDH13 cadherin 13 0.0366862
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.033376
EXT1 exostosin glycosyltransferase 1 0.0331344
HMGA2 high mobility group AT-hook 2 0.0323698
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0309693
COL5A1 collagen, type V, alpha 1 0.0306873
HSPA8 heat shock 70kDa protein 8 0.0305376
FMN1 formin 1 0.0300647
CEMIP cell migration inducing protein, hyaluronan binding 0.029563
VMP1 vacuole membrane protein 1 0.0294017
SMG6 SMG6 nonsense mediated mRNA decay factor 0.0293472
RAD51B RAD51 paralog B 0.0287821
RPS8 ribosomal protein S8 0.0287788
RPTOR regulatory associated protein of MTOR, complex 1 0.0284558
EPAS1 endothelial PAS domain protein 1 0.0283045
TF transferrin 0.0272145
DOCK5 dedicator of cytokinesis 5 0.0265195
SEPTIN9 septin 9 0.0261202
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0260446
MYO10 myosin X 0.0259591
CD44 CD44 molecule (Indian blood group) 0.0259542
TPM3 tropomyosin 3 0.0254179
ITFG1 integrin alpha FG-GAP repeat containing 1 0.0253341
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0252939
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.025151
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0250766
RPS12 ribosomal protein S12 0.0248253
SETX senataxin 0.0239116
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0237973
MT2A metallothionein 2A 0.0235899
PDGFC platelet derived growth factor C 0.023466
STC1 stanniocalcin 1 0.0232374
VAV2 vav 2 guanine nucleotide exchange factor 0.0230692
ANTXR1 anthrax toxin receptor 1 0.022846
EGR1 early growth response 1 0.0228243
RPS17 ribosomal protein S17 0.0226153
ERRFI1 ERBB receptor feedback inhibitor 1 0.0225787
PCBP3 poly(rC) binding protein 3 0.0225525
SRRM2 serine/arginine repetitive matrix 2 0.0224393
TEX14 testis expressed 14 0.0224051
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 0.022359
RPS25 ribosomal protein S25 0.0221605
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0221232
FERMT2 fermitin family member 2 0.021955
ZSWIM6 zinc finger, SWIM-type containing 6 0.0219201
CLIC4 chloride intracellular channel 4 0.0219095
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0218702
GMDS GDP-mannose 4,6-dehydratase 0.0215157
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0213459
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0211924
MYH9 myosin, heavy chain 9, non-muscle 0.0211236
DUSP10 dual specificity phosphatase 10 0.0210621
FN1 fibronectin 1 0.0209775
MEF2D myocyte enhancer factor 2D 0.0208216
NFE2L1 nuclear factor, erythroid 2-like 1 0.0208081
RAI14 retinoic acid induced 14 0.0205187
CUX1 cut-like homeobox 1 0.0202933
BCL9L B-cell CLL/lymphoma 9-like 0.0202704
KMT2D lysine (K)-specific methyltransferase 2D 0.0199526
EEF1G eukaryotic translation elongation factor 1 gamma 0.0199327
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0198844
RNF38 ring finger protein 38 0.0197105
NLGN4Y neuroligin 4, Y-linked 0.0194644
FAT1 FAT atypical cadherin 1 0.0194293
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0193863
EEA1 early endosome antigen 1 0.0193749
RPS2 ribosomal protein S2 0.0191444
AEBP2 AE binding protein 2 0.019117
GATAD2A GATA zinc finger domain containing 2A 0.0190027
RAP1B RAP1B, member of RAS oncogene family 0.01893
LRMDA leucine rich melanocyte differentiation associated 0.0189248
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0188651
JMY junction mediating and regulatory protein, p53 cofactor 0.018829
PCNX4 pecanex 4 0.0186164
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0185879
EVI5 ecotropic viral integration site 5 0.018561
NCOA1 nuclear receptor coactivator 1 0.018523
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0184665
TRIP12 thyroid hormone receptor interactor 12 0.018427
DSPP dentin sialophosphoprotein 0.0183644
POLH polymerase (DNA directed), eta 0.0182944
UNK unkempt family zinc finger 0.0182247
FLT1 fms-related tyrosine kinase 1 0.0181889
NHSL1 NHS-like 1 0.018187
TAFA2 TAFA chemokine like family member 2 0.0181713
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0179062
CLIP2 CAP-GLY domain containing linker protein 2 0.01788
AKAP9 A kinase (PRKA) anchor protein 9 0.0178229
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0176183
ZCCHC7 zinc finger, CCHC domain containing 7 0.0175728
TES testin LIM domain protein 0.0175351

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.575488
IGF2 insulin-like growth factor 2 -0.135733
MEIS2 Meis homeobox 2 -0.107612
VIM vimentin -0.0985724
TRIB2 tribbles pseudokinase 2 -0.0893019
MAP1B microtubule-associated protein 1B -0.0840932
LSAMP limbic system-associated membrane protein -0.0805583
LPIN1 lipin 1 -0.0805331
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0695238
NCAM2 neural cell adhesion molecule 2 -0.0669867
PCDH9 protocadherin 9 -0.0655258
SOS1 son of sevenless homolog 1 (Drosophila) -0.0639789
RPL23 ribosomal protein L23 -0.0567374
PTMA prothymosin, alpha -0.0562181
SYT1 synaptotagmin I -0.0536361
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0506092
OGA O-GlcNAcase -0.0461884
ADGRG6 adhesion G protein-coupled receptor G6 -0.0456522
RPL19 ribosomal protein L19 -0.0453311
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0445791
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0438998
ZFC3H1 zinc finger, C3H1-type containing -0.0436267
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0423646
HELZ helicase with zinc finger -0.0420144
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0413617
NPEPPS aminopeptidase puromycin sensitive -0.0411522
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0407966
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0399581
COL3A1 collagen, type III, alpha 1 -0.0395913
CDC27 cell division cycle 27 -0.0387547
H3-3B H3.3 histone B -0.0374075
KLHL13 kelch-like family member 13 -0.0373471
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0365648
PRKCA protein kinase C, alpha -0.0360926
ZNF292 zinc finger protein 292 -0.0359128
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0355985
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.035023
MBNL2 muscleblind-like splicing regulator 2 -0.0349643
RPL38 ribosomal protein L38 -0.034836
SPAG9 sperm associated antigen 9 -0.0341301
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0337049
LCORL ligand dependent nuclear receptor corepressor-like -0.0336855
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0334486
CCDC47 coiled-coil domain containing 47 -0.0322823
ANGPT1 angiopoietin 1 -0.0320323
NREP neuronal regeneration related protein -0.031954
FBXL20 F-box and leucine-rich repeat protein 20 -0.0315269
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0310169
MATR3 matrin 3 -0.030987
MIS18BP1 MIS18 binding protein 1 -0.0306128
DPH6 diphthamine biosynthesis 6 -0.0305284
NRG1 neuregulin 1 -0.030236
KDM3A lysine (K)-specific demethylase 3A -0.0296939
BBX bobby sox homolog (Drosophila) -0.0295218
CD36 CD36 molecule (thrombospondin receptor) -0.0294569
RPL35A ribosomal protein L35a -0.0294393
NRIP1 nuclear receptor interacting protein 1 -0.0293934
ACTG1 actin gamma 1 -0.0293342
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase -0.0292274
ZMYM2 zinc finger, MYM-type 2 -0.0291272
MYO6 myosin VI -0.0288691
TPST1 tyrosylprotein sulfotransferase 1 -0.028745
SREBF2 sterol regulatory element binding transcription factor 2 -0.0286618
TTC3 tetratricopeptide repeat domain 3 -0.0282688
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0281773
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0280546
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0279659
SCAF11 SR-related CTD-associated factor 11 -0.0279455
FAM162A family with sequence similarity 162, member A -0.0275002
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0272015
ADAR adenosine deaminase, RNA-specific -0.0270345
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0269455
FTL ferritin, light polypeptide -0.0265988
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0260703
COL1A1 collagen, type I, alpha 1 -0.0259112
IGF1R insulin-like growth factor 1 receptor -0.0256657
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0253961
CENPF centromere protein F, 350/400kDa -0.025075
RHOBTB3 Rho-related BTB domain containing 3 -0.0248617
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) -0.0248206
LRP1B low density lipoprotein receptor-related protein 1B -0.0247818
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0247597
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0245822
PANK3 pantothenate kinase 3 -0.0243099
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0242834
IFI16 interferon, gamma-inducible protein 16 -0.0240413
UNC5C unc-5 homolog C (C. elegans) -0.0239374
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0239322
IGF2R insulin-like growth factor 2 receptor -0.0238444
CCNI cyclin I -0.0235422
CLTC clathrin, heavy chain (Hc) -0.0234481
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A -0.023302
OLA1 Obg-like ATPase 1 -0.023245
SEPTIN7 septin 7 -0.0231316
WDR45B WD repeat domain 45B -0.0230935
RAB30 RAB30, member RAS oncogene family -0.0229839
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0227934
FKBP10 FK506 binding protein 10, 65 kDa -0.0227388
TANK TRAF family member-associated NFKB activator -0.0225874
AFF4 AF4/FMR2 family, member 4 -0.0224613