Idarubicin (hydrochloride)_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.180154
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.17524
AKAP12 A kinase (PRKA) anchor protein 12 0.101391
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0991782
ENO1 enolase 1, (alpha) 0.0935877
AXL AXL receptor tyrosine kinase 0.0928508
TRIO trio Rho guanine nucleotide exchange factor 0.0915766
ERRFI1 ERBB receptor feedback inhibitor 1 0.0849643
SMAD3 SMAD family member 3 0.0833822
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0812679
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0767001
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.076454
COL5A1 collagen, type V, alpha 1 0.0733721
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.072974
UBC ubiquitin C 0.0715924
HMGA2 high mobility group AT-hook 2 0.0703195
SEPTIN9 septin 9 0.0688124
RUNX1 runt-related transcription factor 1 0.0679819
CDCP1 CUB domain containing protein 1 0.0673895
PTPRM protein tyrosine phosphatase, receptor type, M 0.0656197
INHBA inhibin, beta A 0.0647392
AHNAK AHNAK nucleoprotein 0.0647063
LAMB3 laminin, beta 3 0.0638297
FAM13A family with sequence similarity 13, member A 0.0612597
TXNIP thioredoxin interacting protein 0.0607753
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0581108
HSPA8 heat shock 70kDa protein 8 0.0576795
ASPH aspartate beta-hydroxylase 0.0562207
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0558523
BHLHE40 basic helix-loop-helix family, member e40 0.0544579
JUN jun proto-oncogene 0.0541608
MLPH melanophilin 0.0539303
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0523076
MYH9 myosin, heavy chain 9, non-muscle 0.051887
EEF2 eukaryotic translation elongation factor 2 0.0504383
MT2A metallothionein 2A 0.0498754
TM4SF1 transmembrane 4 L six family member 1 0.0491489
PCBP2 poly(rC) binding protein 2 0.0455495
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0444115
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.043679
FLNA filamin A, alpha 0.042864
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0421955
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0420654
TAC4 tachykinin 4 (hemokinin) 0.0406955
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0405389
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0404844
EMP1 epithelial membrane protein 1 0.0403502
PTK2 protein tyrosine kinase 2 0.0402762
NAP1L1 nucleosome assembly protein 1-like 1 0.0396173
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0385104
DTNA dystrobrevin, alpha 0.0375924
AFF3 AF4/FMR2 family, member 3 0.0374035
DST dystonin 0.0371973
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0369198
DOCK5 dedicator of cytokinesis 5 0.0368526
SHB Src homology 2 domain containing adaptor protein B 0.0368302
SYAP1 synapse associated protein 1 0.036471
RPS27A ribosomal protein S27a 0.0361814
TNS1 tensin 1 0.035887
TPM3 tropomyosin 3 0.0353563
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0344769
SET SET nuclear proto-oncogene 0.0343334
WWOX WW domain containing oxidoreductase 0.033859
ZBTB38 zinc finger and BTB domain containing 38 0.0338401
FLNB filamin B, beta 0.033804
G0S2 G0/G1 switch 2 0.0337881
TNIP1 TNFAIP3 interacting protein 1 0.033189
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0330737
STC1 stanniocalcin 1 0.0326839
SRRM2 serine/arginine repetitive matrix 2 0.0326455
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0321323
SYNE2 spectrin repeat containing, nuclear envelope 2 0.032041
TIMP1 TIMP metallopeptidase inhibitor 1 0.0318418
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.031759
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0312965
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0311745
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0311275
SMC1A structural maintenance of chromosomes 1A 0.0306606
SEMA7A semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group) 0.0306093
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0304847
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0298278
YBX3 Y box binding protein 3 0.0297438
ZNF638 zinc finger protein 638 0.029183
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0290612
HMGB2 high mobility group box 2 0.0289247
MYO10 myosin X 0.0288392
KDM2A lysine (K)-specific demethylase 2A 0.0287703
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0287191
NFE2L1 nuclear factor, erythroid 2-like 1 0.0286608
TXNRD1 thioredoxin reductase 1 0.0283606
KDM5C lysine (K)-specific demethylase 5C 0.0282548
SFPQ splicing factor proline/glutamine-rich 0.0280734
TPI1 triosephosphate isomerase 1 0.0279978
NCOR2 nuclear receptor corepressor 2 0.0279177
MKI67 marker of proliferation Ki-67 0.027367
EZR ezrin 0.0272161
SMYD3 SET and MYND domain containing 3 0.0272095
RPL4 ribosomal protein L4 0.0270684
TBC1D5 TBC1 domain family, member 5 0.0266593
DDIT4 DNA-damage-inducible transcript 4 0.0266489

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.283145
FN1 fibronectin 1 -0.282586
IGF2 insulin-like growth factor 2 -0.133909
VCL vinculin -0.128039
CDH13 cadherin 13 -0.11799
TMSB10 thymosin beta 10 -0.112396
ACTG1 actin gamma 1 -0.10058
RPL35A ribosomal protein L35a -0.0785802
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0713395
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0641527
FTL ferritin, light polypeptide -0.0558386
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0557713
GLIS3 GLIS family zinc finger 3 -0.0556028
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0553905
SEC31A SEC31 homolog A (S. cerevisiae) -0.050533
IGFBP3 insulin-like growth factor binding protein 3 -0.0479196
SBF2 SET binding factor 2 -0.0466126
INTS6 integrator complex subunit 6 -0.0463291
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0462313
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0447757
RPLP1 ribosomal protein, large, P1 -0.0425608
FNDC3B fibronectin type III domain containing 3B -0.0415068
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0408848
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0405839
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0399222
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.039897
EXT1 exostosin glycosyltransferase 1 -0.0391225
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0388517
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0379603
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0377042
PDLIM5 PDZ and LIM domain 5 -0.0374302
FBXO11 F-box protein 11 -0.0370397
TNNC1 troponin C type 1 (slow) -0.0369247
TPM4 tropomyosin 4 -0.0362897
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0359676
TENM2 teneurin transmembrane protein 2 -0.0346781
PGK1 phosphoglycerate kinase 1 -0.0324027
TPT1 tumor protein, translationally-controlled 1 -0.0319627
RAB2A RAB2A, member RAS oncogene family -0.0318352
MORF4L2 mortality factor 4 like 2 -0.0313473
LRRC23 leucine rich repeat containing 23 -0.0299591
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0295661
CALD1 caldesmon 1 -0.0291296
TMEM165 transmembrane protein 165 -0.0288582
SLIT2 slit homolog 2 (Drosophila) -0.0287832
VASP vasodilator-stimulated phosphoprotein -0.0285378
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.0282606
HM13 histocompatibility (minor) 13 -0.0281219
NECTIN2 nectin cell adhesion molecule 2 -0.0279788
F3 coagulation factor III (thromboplastin, tissue factor) -0.0277505
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0275094
OSMR oncostatin M receptor -0.0262038
PDIA3 protein disulfide isomerase family A, member 3 -0.0261027
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0259984
ENO2 enolase 2 (gamma, neuronal) -0.0259171
S100A10 S100 calcium binding protein A10 -0.0256201
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.025427
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0252856
RPL34 ribosomal protein L34 -0.0249235
KDM5B lysine (K)-specific demethylase 5B -0.0248377
RAP1B RAP1B, member of RAS oncogene family -0.0247964
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0246906
PCNX4 pecanex 4 -0.0244538
GNAS GNAS complex locus -0.0242982
CLIC4 chloride intracellular channel 4 -0.0242746
LCORL ligand dependent nuclear receptor corepressor-like -0.0241003
RAB31 RAB31, member RAS oncogene family -0.0240535
SEC24D SEC24 family member D -0.0239326
NABP1 nucleic acid binding protein 1 -0.0236929
SCLT1 sodium channel and clathrin linker 1 -0.0236516
RPS13 ribosomal protein S13 -0.023577
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0234234
COPA coatomer protein complex, subunit alpha -0.0233333
IGFBP4 insulin-like growth factor binding protein 4 -0.0233259
RPS24 ribosomal protein S24 -0.0232328
PTMA prothymosin, alpha -0.0231978
TBCA tubulin folding cofactor A -0.023019
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0228866
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0225841
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0224165
SEPTIN2 septin 2 -0.0224126
RPL37A ribosomal protein L37a -0.0222211
RPS19 ribosomal protein S19 -0.022166
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0220543
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.022027
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0219574
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0218957
RPS29 ribosomal protein S29 -0.0211303
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0210316
RAB1A RAB1A, member RAS oncogene family -0.0210231
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0205825
FERMT2 fermitin family member 2 -0.0205667
NLK nemo-like kinase -0.0205137
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0204485
SEC23A Sec23 homolog A (S. cerevisiae) -0.0204253
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0201567
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0201469
LMAN1 lectin, mannose-binding, 1 -0.0200064
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.019931
RPLP2 ribosomal protein, large, P2 -0.0198106