Idarubicin (hydrochloride)_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.149063
RPS6 ribosomal protein S6 0.107958
FTH1 ferritin, heavy polypeptide 1 0.076372
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0717725
CALR calreticulin 0.0658126
RPS2 ribosomal protein S2 0.0644376
HMGA2 high mobility group AT-hook 2 0.0527781
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0492716
YBX1 Y box binding protein 1 0.0462639
CANX calnexin 0.0459914
GOLGA4 golgin A4 0.0458856
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0431034
COL3A1 collagen, type III, alpha 1 0.0427406
EEF2 eukaryotic translation elongation factor 2 0.0425437
NFE2L1 nuclear factor, erythroid 2-like 1 0.0398583
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0391229
DSTN destrin (actin depolymerizing factor) 0.0381574
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0377563
COL1A1 collagen, type I, alpha 1 0.0373829
CDH13 cadherin 13 0.036987
BHLHE40 basic helix-loop-helix family, member e40 0.0361695
MYH9 myosin, heavy chain 9, non-muscle 0.035256
TLN1 talin 1 0.0338023
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0334987
COL4A1 collagen, type IV, alpha 1 0.0328941
TTC3 tetratricopeptide repeat domain 3 0.0324185
RPS8 ribosomal protein S8 0.0322999
IGFBP7 insulin-like growth factor binding protein 7 0.0321416
HSPA8 heat shock 70kDa protein 8 0.0320491
MAP4 microtubule-associated protein 4 0.0301578
LOX lysyl oxidase 0.0300284
PRRC2C proline-rich coiled-coil 2C 0.0295867
RND3 Rho family GTPase 3 0.029083
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0289951
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0286862
GARS1 glycyl-tRNA synthetase 1 0.0285815
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0284337
RPL26 ribosomal protein L26 0.0278694
TMF1 TATA element modulatory factor 1 0.0262603
RPL13A ribosomal protein L13a 0.0262401
EIF1 eukaryotic translation initiation factor 1 0.0257425
TMSB4X thymosin beta 4, X-linked 0.0251653
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.0250976
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0249096
ELL2 elongation factor, RNA polymerase II, 2 0.0248709
THY1 Thy-1 cell surface antigen 0.0247951
ANKRD11 ankyrin repeat domain 11 0.0243565
RPL4 ribosomal protein L4 0.024102
BRD4 bromodomain containing 4 0.0231496
KIF5B kinesin family member 5B 0.0228213
CCDC80 coiled-coil domain containing 80 0.0228193
CLTC clathrin, heavy chain (Hc) 0.0226627
CFB complement factor B 0.0225752
MLEC malectin 0.0225695
RPL5 ribosomal protein L5 0.0224322
RTN4 reticulon 4 0.0222844
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0222038
RSU1 Ras suppressor protein 1 0.0221924
ERRFI1 ERBB receptor feedback inhibitor 1 0.0220767
ALCAM activated leukocyte cell adhesion molecule 0.0219796
RBM39 RNA binding motif protein 39 0.0217085
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0215364
TUBA1B tubulin, alpha 1b 0.0213151
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0212497
FSTL1 follistatin-like 1 0.0209802
CDK13 cyclin-dependent kinase 13 0.0207952
HYOU1 hypoxia up-regulated 1 0.0205517
MLF1 myeloid leukemia factor 1 0.0205034
RAB2A RAB2A, member RAS oncogene family 0.0203479
IQGAP1 IQ motif containing GTPase activating protein 1 0.020323
EIF4H eukaryotic translation initiation factor 4H 0.0200044
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0195284
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0194319
TAOK1 TAO kinase 1 0.0194251
MTDH metadherin 0.0194048
OSBPL8 oxysterol binding protein-like 8 0.019195
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.0191318
TRIP12 thyroid hormone receptor interactor 12 0.0190652
VIRMA vir like m6A methyltransferase associated 0.0189508
OSBP oxysterol binding protein 0.0189298
MSN moesin 0.0188389
TPR translocated promoter region, nuclear basket protein 0.0188249
NSUN6 NOP2/Sun domain family, member 6 0.0187014
DCAF13 DDB1 and CUL4 associated factor 13 0.0186181
SRRM1 serine/arginine repetitive matrix 1 0.0186131
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0185751
RPS12 ribosomal protein S12 0.0185407
CALD1 caldesmon 1 0.0184385
TPM3 tropomyosin 3 0.0184118
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0183918
USP36 ubiquitin specific peptidase 36 0.0183372
RPL36 ribosomal protein L36 0.0183353
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0182037
AXL AXL receptor tyrosine kinase 0.0181621
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0180686
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0179959
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0176957
EEF1G eukaryotic translation elongation factor 1 gamma 0.0175546
RPS3 ribosomal protein S3 0.0175255
SF3A1 splicing factor 3a, subunit 1, 120kDa 0.0173658

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.194963
CXCL8 chemokine (C-X-C motif) ligand 8 -0.156613
VIM vimentin -0.119786
COL6A3 collagen, type VI, alpha 3 -0.115776
IGFBP3 insulin-like growth factor binding protein 3 -0.0897773
IER3 immediate early response 3 -0.08531
TMSB10 thymosin beta 10 -0.0831608
MT2A metallothionein 2A -0.082922
F3 coagulation factor III (thromboplastin, tissue factor) -0.080597
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0765832
FBN1 fibrillin 1 -0.0696231
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0650762
LDHA lactate dehydrogenase A -0.0617499
FN1 fibronectin 1 -0.0596638
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0595459
VEGFA vascular endothelial growth factor A -0.047212
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0470725
B2M beta-2-microglobulin -0.0459678
NALF1 NALCN channel auxiliary factor 1 -0.044306
ENO1 enolase 1, (alpha) -0.0441788
TENT5A terminal nucleotidyltransferase 5A -0.0436143
CD44 CD44 molecule (Indian blood group) -0.0428789
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0402824
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0399619
ZBTB20 zinc finger and BTB domain containing 20 -0.0393362
IFI6 interferon, alpha-inducible protein 6 -0.0392989
MTSS1 metastasis suppressor 1 -0.0388079
TMEM165 transmembrane protein 165 -0.038319
RUNX1 runt-related transcription factor 1 -0.0368024
TRIO trio Rho guanine nucleotide exchange factor -0.0362367
PRELID2 PRELI domain containing 2 -0.0360835
SQSTM1 sequestosome 1 -0.0360149
PTK2 protein tyrosine kinase 2 -0.0353861
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0352335
KIAA1217 KIAA1217 -0.0351215
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0336289
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0332996
DLG1 discs, large homolog 1 (Drosophila) -0.0327977
TPM4 tropomyosin 4 -0.0326602
GLIS3 GLIS family zinc finger 3 -0.0310671
VDAC1 voltage-dependent anion channel 1 -0.0306526
RPL35A ribosomal protein L35a -0.0304577
PSD3 pleckstrin and Sec7 domain containing 3 -0.02937
ACTG1 actin gamma 1 -0.0292136
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0284761
OSMR oncostatin M receptor -0.0281501
LOC112694756 uncharaterized LOC112694756 -0.0272399
IRF1 interferon regulatory factor 1 -0.0271594
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0271144
IL6 interleukin 6 -0.0270615
POTEF POTE ankyrin domain family, member F -0.0266694
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0263367
SMAD3 SMAD family member 3 -0.026138
PKM pyruvate kinase, muscle -0.0259899
IL6ST interleukin 6 signal transducer -0.0257413
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0253836
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.024991
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0249234
RNF213 ring finger protein 213 -0.0247529
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0245471
ACBD3 acyl-CoA binding domain containing 3 -0.0241504
INTS6 integrator complex subunit 6 -0.0239296
ARRDC3 arrestin domain containing 3 -0.0238224
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0237888
EGFR epidermal growth factor receptor -0.0237029
ADM adrenomedullin -0.0236502
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.023245
COL6A2 collagen, type VI, alpha 2 -0.0230356
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0230046
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0229287
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0224313
BNC2 basonuclin 2 -0.0224255
KDM4C lysine (K)-specific demethylase 4C -0.0222276
SOD2 superoxide dismutase 2, mitochondrial -0.0219641
ADAM9 ADAM metallopeptidase domain 9 -0.0217117
JARID2 jumonji, AT rich interactive domain 2 -0.0212446
FRMD4A FERM domain containing 4A -0.021133
DPYD dihydropyrimidine dehydrogenase -0.0210037
ITGAV integrin, alpha V -0.0209159
PGK1 phosphoglycerate kinase 1 -0.0206675
KDM7A lysine (K)-specific demethylase 7A -0.0206132
ICAM1 intercellular adhesion molecule 1 -0.0205713
S100A6 S100 calcium binding protein A6 -0.0205598
GLRX glutaredoxin (thioltransferase) -0.0204974
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0204781
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0204666
PRKCE protein kinase C, epsilon -0.0204535
H3-3B H3.3 histone B -0.0203873
TAGLN2 transgelin 2 -0.0203839
RPS24 ribosomal protein S24 -0.0198787
FBXL7 F-box and leucine-rich repeat protein 7 -0.0197659
CAV1 caveolin 1, caveolae protein, 22kDa -0.0197217
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0196549
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0196258
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0196109
CLMP CXADR-like membrane protein -0.0195015
PXDN peroxidasin -0.0194912
APOLD1 apolipoprotein L domain containing 1 -0.0194323
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.0192436
HMGA1 high mobility group AT-hook 1 -0.0191494