Idarubicin (hydrochloride)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.093216
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0656022
HSPA8 heat shock 70kDa protein 8 0.0481037
RPS12 ribosomal protein S12 0.0430555
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0382818
TMEM117 transmembrane protein 117 0.0367197
RPS2 ribosomal protein S2 0.0366209
YBX3 Y box binding protein 3 0.0340899
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0330699
CASZ1 castor zinc finger 1 0.0323163
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0316213
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0289984
APLP2 amyloid beta (A4) precursor-like protein 2 0.0288417
RPS19 ribosomal protein S19 0.0286047
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0281384
B2M beta-2-microglobulin 0.0276869
TLN1 talin 1 0.0270445
PTPRG protein tyrosine phosphatase, receptor type, G 0.025176
IFI27 interferon, alpha-inducible protein 27 0.0248111
RPS8 ribosomal protein S8 0.0236179
EPHA4 EPH receptor A4 0.0231197
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0230689
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0230248
IL32 interleukin 32 0.0227003
SULF2 sulfatase 2 0.0215
MT2A metallothionein 2A 0.0214528
LOC102724023 ES1 protein homolog, mitochondrial 0.0209728
HSPG2 heparan sulfate proteoglycan 2 0.0202815
POLH polymerase (DNA directed), eta 0.0202251
XPC xeroderma pigmentosum, complementation group C 0.0199949
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0195913
TENT5A terminal nucleotidyltransferase 5A 0.0195682
CELF2 CUGBP, Elav-like family member 2 0.0192357
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.0185743
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.018403
TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 0.0183466
RPS27 ribosomal protein S27 0.0183003
SAMD4A sterile alpha motif domain containing 4A 0.0182058
UBTF upstream binding transcription factor, RNA polymerase I 0.018045
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0179519
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0179289
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa 0.0178566
RPL36 ribosomal protein L36 0.0173616
PRRC2B proline-rich coiled-coil 2B 0.0172259
ANXA4 annexin A4 0.0171496
HLA-E major histocompatibility complex, class I, E 0.0169874
TBC1D4 TBC1 domain family, member 4 0.0168848
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0167795
ARL15 ADP-ribosylation factor-like 15 0.0165854
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0165722
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 0.0164848
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0163465
RNF213 ring finger protein 213 0.0163171
ATF3 activating transcription factor 3 0.0163009
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 0.0162171
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.0160799
GDF15 growth differentiation factor 15 0.0160269
THRB thyroid hormone receptor, beta 0.0159017
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0158586
CST3 cystatin C 0.0157856
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0156592
FBXO32 F-box protein 32 0.0156299
ZDHHC14 zinc finger, DHHC-type containing 14 0.0155459
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 0.0153586
GNAS GNAS complex locus 0.0153545
VIM vimentin 0.0153526
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0153191
GLIS3 GLIS family zinc finger 3 0.0153015
ZMAT3 zinc finger, matrin-type 3 0.0152688
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0152371
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0152327
IKBIP IKBKB interacting protein 0.0150194
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0149833
SFTPA2 surfactant protein A2 0.01493
ATXN1L ataxin 1-like 0.014927
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0149207
TMC5 transmembrane channel-like 5 0.0149121
MED29 mediator complex subunit 29 0.0148639
SOX4 SRY (sex determining region Y)-box 4 0.0148198
TPM3 tropomyosin 3 0.0147444
WNK1 WNK lysine deficient protein kinase 1 0.0146586
MRPL33 mitochondrial ribosomal protein L33 0.0145318
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 0.0143568
CLIP1 CAP-GLY domain containing linker protein 1 0.0142919
REST RE1-silencing transcription factor 0.0141859
ITFG1 integrin alpha FG-GAP repeat containing 1 0.0140946
TIGAR TP53 induced glycolysis regulatory phosphatase 0.0139969
ISG15 ISG15 ubiquitin-like modifier 0.0139378
COL26A1 collagen, type XXVI, alpha 1 0.0139331
RAB7A RAB7A, member RAS oncogene family 0.0139117
COBLL1 cordon-bleu WH2 repeat protein-like 1 0.0137809
SEPTIN11 septin 11 0.0137547
ACLY ATP citrate lyase 0.0137162
NSUN6 NOP2/Sun domain family, member 6 0.0136513
SELENOK selenoprotein K 0.0135719
SYAP1 synapse associated protein 1 0.0134737
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0133952
MYO6 myosin VI 0.0133526
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.013314
RPS29 ribosomal protein S29 0.0132374

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.234
PTMA prothymosin, alpha -0.206318
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.124817
CEMIP cell migration inducing protein, hyaluronan binding -0.12198
ANXA2 annexin A2 -0.116619
FLNB filamin B, beta -0.115907
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.112516
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.100354
FAT1 FAT atypical cadherin 1 -0.0946979
GMDS GDP-mannose 4,6-dehydratase -0.0946044
LDHA lactate dehydrogenase A -0.0915578
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0900428
ANTXR2 anthrax toxin receptor 2 -0.0891337
VCL vinculin -0.0871966
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0859032
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0854938
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0852972
PRELID2 PRELI domain containing 2 -0.0789762
NALF1 NALCN channel auxiliary factor 1 -0.0782213
ITGA6 integrin, alpha 6 -0.0769233
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0747778
TMSB10 thymosin beta 10 -0.074189
ACTN4 actinin, alpha 4 -0.0739219
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0732861
TNS4 tensin 4 -0.0700913
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0682773
GREB1L growth regulation by estrogen in breast cancer-like -0.0665853
RNF43 ring finger protein 43 -0.0636085
ENO1 enolase 1, (alpha) -0.0629685
ASPH aspartate beta-hydroxylase -0.0624113
AHNAK AHNAK nucleoprotein -0.061368
TPM4 tropomyosin 4 -0.0588373
PPARG peroxisome proliferator-activated receptor gamma -0.0573076
PGK1 phosphoglycerate kinase 1 -0.0571996
KRT18 keratin 18, type I -0.0557292
GPHN gephyrin -0.0525073
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0523898
NDRG1 N-myc downstream regulated 1 -0.0518186
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0513814
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0503711
ARHGAP32 Rho GTPase activating protein 32 -0.0503136
BIRC6 baculoviral IAP repeat containing 6 -0.0499008
MYO1E myosin IE -0.049539
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.04926
ALCAM activated leukocyte cell adhesion molecule -0.0492213
ACTG1 actin gamma 1 -0.048912
LPP LIM domain containing preferred translocation partner in lipoma -0.0482663
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.046113
ARHGAP26 Rho GTPase activating protein 26 -0.0458107
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0456963
RNF217 ring finger protein 217 -0.0455506
PATJ PATJ crumbs cell polarity complex component -0.0453907
SMYD3 SET and MYND domain containing 3 -0.0453151
ATXN1 ataxin 1 -0.04518
CCNY cyclin Y -0.0449636
PDLIM5 PDZ and LIM domain 5 -0.0445196
CALB1 calbindin 1, 28kDa -0.0444347
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0438227
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0437229
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0435311
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0434968
KLF5 Kruppel-like factor 5 (intestinal) -0.0429853
SAMD5 sterile alpha motif domain containing 5 -0.0429314
POTEF POTE ankyrin domain family, member F -0.0429015
KRT8 keratin 8, type II -0.0420913
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0420515
ANKRD17 ankyrin repeat domain 17 -0.041866
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0416808
FHIT fragile histidine triad -0.0416235
PALLD palladin, cytoskeletal associated protein -0.0414469
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0413614
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0411944
PKM pyruvate kinase, muscle -0.0411429
GRB10 growth factor receptor-bound protein 10 -0.0407733
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.040113
ECT2 epithelial cell transforming 2 -0.040017
MAML2 mastermind-like 2 (Drosophila) -0.0397856
TRIM2 tripartite motif containing 2 -0.0395843
MBNL2 muscleblind-like splicing regulator 2 -0.0394232
SETD5 SET domain containing 5 -0.0392803
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0391183
SLC35F3 solute carrier family 35, member F3 -0.0390426
ZNF292 zinc finger protein 292 -0.0390187
DENND1A DENN/MADD domain containing 1A -0.0389298
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.03848
PSD3 pleckstrin and Sec7 domain containing 3 -0.0383676
FNDC3B fibronectin type III domain containing 3B -0.0382828
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0379078
NFIA nuclear factor I/A -0.0377308
RAP1B RAP1B, member of RAS oncogene family -0.0377117
ANKRD11 ankyrin repeat domain 11 -0.0376226
USP34 ubiquitin specific peptidase 34 -0.03755
PIGR polymeric immunoglobulin receptor -0.0374187
FERMT1 fermitin family member 1 -0.0373312
TBC1D22A TBC1 domain family, member 22A -0.0367452
MED13L mediator complex subunit 13-like -0.0365458
EREG epiregulin -0.0363952
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0361825
TAS2R14 taste receptor, type 2, member 14 -0.0361791
PRSS3 protease, serine, 3 -0.036152