Idarubicin (hydrochloride)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TPI1 triosephosphate isomerase 1 0.0761456
MKI67 marker of proliferation Ki-67 0.0751299
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0681595
EGR1 early growth response 1 0.066491
IFI6 interferon, alpha-inducible protein 6 0.061702
AKAP12 A kinase (PRKA) anchor protein 12 0.0594021
TLN1 talin 1 0.0504644
WNK1 WNK lysine deficient protein kinase 1 0.0470859
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0460867
TPM3 tropomyosin 3 0.0441592
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.043581
HSPA8 heat shock 70kDa protein 8 0.0427712
TM4SF1 transmembrane 4 L six family member 1 0.041862
HLA-B major histocompatibility complex, class I, B 0.041077
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0398823
CHD4 chromodomain helicase DNA binding protein 4 0.0382675
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0379346
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.036982
ELL2 elongation factor, RNA polymerase II, 2 0.0359692
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0343596
CENPF centromere protein F, 350/400kDa 0.0340799
R3HDM2 R3H domain containing 2 0.0335232
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0327036
RPS2 ribosomal protein S2 0.0320062
GRAMD1B GRAM domain containing 1B 0.0313228
ZSWIM6 zinc finger, SWIM-type containing 6 0.0309204
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0306257
NAP1L1 nucleosome assembly protein 1-like 1 0.0301969
NFE2L1 nuclear factor, erythroid 2-like 1 0.0298952
NSUN6 NOP2/Sun domain family, member 6 0.0298222
CTTN cortactin 0.0293925
TOP1 topoisomerase (DNA) I 0.0291874
RIMS2 regulating synaptic membrane exocytosis 2 0.0290019
SSH2 slingshot protein phosphatase 2 0.0289663
RPS3 ribosomal protein S3 0.0285891
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0284411
SFPQ splicing factor proline/glutamine-rich 0.0280432
GPHN gephyrin 0.02772
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0274853
DNAH14 dynein, axonemal, heavy chain 14 0.0272014
HOMER1 homer scaffolding protein 1 0.0266424
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 0.0261575
TUBA1C tubulin, alpha 1c 0.0257585
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0248022
RBBP6 retinoblastoma binding protein 6 0.0243322
RPL4 ribosomal protein L4 0.024294
RABGAP1L RAB GTPase activating protein 1-like 0.0241991
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0241881
RAB7A RAB7A, member RAS oncogene family 0.0241548
ETV6 ets variant 6 0.0239649
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 0.023394
TRAPPC9 trafficking protein particle complex 9 0.0230104
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0226734
CAVIN1 caveolae associated protein 1 0.0224402
C6ORF62 chromosome 6 open reading frame 62 0.02208
TFPI2 tissue factor pathway inhibitor 2 0.0218735
PKP4 plakophilin 4 0.0218175
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0217034
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 0.0216519
STAU1 staufen double-stranded RNA binding protein 1 0.0215335
ERRFI1 ERBB receptor feedback inhibitor 1 0.0210758
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0209205
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0208743
BRD4 bromodomain containing 4 0.0207703
REST RE1-silencing transcription factor 0.020765
DST dystonin 0.020606
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0201977
KLHL29 kelch-like family member 29 0.0201345
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0199988
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0198303
BHLHE40 basic helix-loop-helix family, member e40 0.0197654
PRKCE protein kinase C, epsilon 0.0197434
FLNA filamin A, alpha 0.0197075
THADA thyroid adenoma associated 0.0195138
LARP4B La ribonucleoprotein domain family, member 4B 0.019498
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0193719
ARID1A AT rich interactive domain 1A (SWI-like) 0.0193457
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0192853
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0192679
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0192623
PRRC2B proline-rich coiled-coil 2B 0.0192479
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0190325
CFLAR CASP8 and FADD-like apoptosis regulator 0.0189772
RCOR1 REST corepressor 1 0.0189291
BZW1 basic leucine zipper and W2 domains 1 0.018919
NHSL1 NHS-like 1 0.0186756
NABP1 nucleic acid binding protein 1 0.0183372
FUS FUS RNA binding protein 0.0182163
TASOR2 transcription activation suppressor family member 2 0.0181318
TUBA1B tubulin, alpha 1b 0.017785
TUBB4B tubulin, beta 4B class IVb 0.0175414
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0173945
AHI1 Abelson helper integration site 1 0.0173742
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.017231
AFG2A AFG2 AAA ATPase homolog A 0.017165
IL6ST interleukin 6 signal transducer 0.0171586
GSE1 Gse1 coiled-coil protein 0.0171241
AOPEP aminopeptidase O (putative) 0.0170098
SAMD4A sterile alpha motif domain containing 4A 0.0169354
ICAM1 intercellular adhesion molecule 1 0.0169203

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.140717
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.111596
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.106968
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.106341
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.08402
POTEF POTE ankyrin domain family, member F -0.0835919
VIM vimentin -0.0827474
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0826557
TMSB10 thymosin beta 10 -0.0808485
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0736345
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0724616
PTMA prothymosin, alpha -0.0692372
BBX bobby sox homolog (Drosophila) -0.0663687
CSDE1 cold shock domain containing E1, RNA-binding -0.0662737
USP34 ubiquitin specific peptidase 34 -0.0662433
RSF1 remodeling and spacing factor 1 -0.0642651
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0616702
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0614657
KTN1 kinectin 1 (kinesin receptor) -0.0571282
RAD51B RAD51 paralog B -0.0536834
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0520448
ENO1 enolase 1, (alpha) -0.0515598
RBM39 RNA binding motif protein 39 -0.0511224
COPA coatomer protein complex, subunit alpha -0.0507639
UBE2H ubiquitin-conjugating enzyme E2H -0.0505902
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0476711
PFN1 profilin 1 -0.0468722
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0467669
PGK1 phosphoglycerate kinase 1 -0.0459315
RPL35A ribosomal protein L35a -0.0454151
PRELID2 PRELI domain containing 2 -0.0444522
LDHB lactate dehydrogenase B -0.0443143
SETD5 SET domain containing 5 -0.0441695
OGA O-GlcNAcase -0.0435958
TAS2R14 taste receptor, type 2, member 14 -0.0435754
EML4 echinoderm microtubule associated protein like 4 -0.043521
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0434106
CAMTA1 calmodulin binding transcription activator 1 -0.0431666
PHIP pleckstrin homology domain interacting protein -0.0429793
PDIA3 protein disulfide isomerase family A, member 3 -0.0426687
AKAP9 A kinase (PRKA) anchor protein 9 -0.0425666
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0422142
RPLP0 ribosomal protein, large, P0 -0.0420486
TFG TRK-fused gene -0.0414136
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0413943
KPNB1 karyopherin (importin) beta 1 -0.0413318
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0411393
MON2 MON2 homolog (S. cerevisiae) -0.040834
ATXN1 ataxin 1 -0.0407768
MORF4L2 mortality factor 4 like 2 -0.0406024
TMEM165 transmembrane protein 165 -0.0405681
ZNF207 zinc finger protein 207 -0.0405267
PDE4D phosphodiesterase 4D, cAMP-specific -0.0398636
SBF2 SET binding factor 2 -0.0387713
ZNF292 zinc finger protein 292 -0.0382585
LMAN1 lectin, mannose-binding, 1 -0.0377435
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0376705
ACTG1 actin gamma 1 -0.0367959
BIRC6 baculoviral IAP repeat containing 6 -0.0366669
KMT2E lysine (K)-specific methyltransferase 2E -0.0361962
XPO1 exportin 1 -0.0361811
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0361044
PDIA6 protein disulfide isomerase family A, member 6 -0.0360264
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0355776
VDAC1 voltage-dependent anion channel 1 -0.0352507
GOLGA4 golgin A4 -0.0347277
CANX calnexin -0.0346515
WASF2 WAS protein family, member 2 -0.0340959
WDR45B WD repeat domain 45B -0.03388
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0332835
PHF21A PHD finger protein 21A -0.0332419
CAMKMT calmodulin-lysine N-methyltransferase -0.0331129
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0330496
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.032881
ZBTB20 zinc finger and BTB domain containing 20 -0.0328755
BABAM2 BRISC and BRCA1 A complex member 2 -0.0327859
HELZ helicase with zinc finger -0.0322999
TPM4 tropomyosin 4 -0.0322572
HMGA1 high mobility group AT-hook 1 -0.0320312
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0318645
KRT18 keratin 18, type I -0.0318059
MYL12B myosin, light chain 12B, regulatory -0.0316928
NCOA7 nuclear receptor coactivator 7 -0.0315623
RPL19 ribosomal protein L19 -0.0315398
COG5 component of oligomeric golgi complex 5 -0.0314526
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0313805
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0313079
SEPTIN7 septin 7 -0.031096
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0307118
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0301716
SPDYA speedy/RINGO cell cycle regulator family member A -0.0300589
LDHA lactate dehydrogenase A -0.0299334
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0298463
MYOF myoferlin -0.0288923
TBK1 TANK-binding kinase 1 -0.028828
VEZT vezatin, adherens junctions transmembrane protein -0.0287658
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0283541
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0281839
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0281223
ANKRD12 ankyrin repeat domain 12 -0.0279902