Idarubicin (hydrochloride)_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.149104
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0975028
FTH1 ferritin, heavy polypeptide 1 0.0963581
BHLHE40 basic helix-loop-helix family, member e40 0.0948167
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0880043
FTL ferritin, light polypeptide 0.0658332
BRD2 bromodomain containing 2 0.0658027
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0632244
RPS6 ribosomal protein S6 0.062508
PRRC2C proline-rich coiled-coil 2C 0.0616937
TSC22D2 TSC22 domain family, member 2 0.0557715
EIF1 eukaryotic translation initiation factor 1 0.0544166
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0524424
RPS2 ribosomal protein S2 0.0505903
HSPA8 heat shock 70kDa protein 8 0.0500015
EZR ezrin 0.0484761
GOLGA4 golgin A4 0.0467208
RBM25 RNA binding motif protein 25 0.0432867
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0416601
TMF1 TATA element modulatory factor 1 0.0406224
PCBP2 poly(rC) binding protein 2 0.0403479
EEF2 eukaryotic translation elongation factor 2 0.0391702
CCNL1 cyclin L1 0.038913
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.0382885
ELL2 elongation factor, RNA polymerase II, 2 0.0380858
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0376535
TXNIP thioredoxin interacting protein 0.0376414
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0375436
FAM13A family with sequence similarity 13, member A 0.0368418
EGR1 early growth response 1 0.0360268
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0359792
WNK1 WNK lysine deficient protein kinase 1 0.0344528
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0344438
MSN moesin 0.0329753
EFNA5 ephrin-A5 0.0323941
PNN pinin, desmosome associated protein 0.031785
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.031476
TPM3 tropomyosin 3 0.0312829
PGAM4 phosphoglycerate mutase family member 4 0.0309553
MACC1 metastasis associated in colon cancer 1 0.0299044
RTN4 reticulon 4 0.0297463
SGMS2 sphingomyelin synthase 2 0.0295617
VMP1 vacuole membrane protein 1 0.0286091
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0282679
RNF145 ring finger protein 145 0.0278632
DTNA dystrobrevin, alpha 0.02755
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0270139
EEF1G eukaryotic translation elongation factor 1 gamma 0.0264882
ATF4 activating transcription factor 4 0.0264385
RPS12 ribosomal protein S12 0.0262595
KTN1 kinectin 1 (kinesin receptor) 0.0253437
PPARD peroxisome proliferator-activated receptor delta 0.0248358
ATF3 activating transcription factor 3 0.0246147
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0242307
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0242226
GOLGB1 golgin B1 0.0239348
RND3 Rho family GTPase 3 0.023679
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0234845
RSRC2 arginine/serine-rich coiled-coil 2 0.0232592
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0231591
STEAP4 STEAP family member 4 0.0230883
JMY junction mediating and regulatory protein, p53 cofactor 0.02294
HMGB2 high mobility group box 2 0.0224904
CHD1 chromodomain helicase DNA binding protein 1 0.0223436
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0221127
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.0219072
LOC102724023 ES1 protein homolog, mitochondrial 0.0218314
ZNF292 zinc finger protein 292 0.0216026
USP53 ubiquitin specific peptidase 53 0.0215293
PUM1 pumilio RNA-binding family member 1 0.0214694
ERRFI1 ERBB receptor feedback inhibitor 1 0.0209637
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0205278
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0204995
WBP11 WW domain binding protein 11 0.0203011
AKAP9 A kinase (PRKA) anchor protein 9 0.0200354
DDIT4 DNA-damage-inducible transcript 4 0.0195978
KMT2E lysine (K)-specific methyltransferase 2E 0.0195119
JUN jun proto-oncogene 0.0194915
DUSP5 dual specificity phosphatase 5 0.0194406
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0193717
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0193492
SRRM2 serine/arginine repetitive matrix 2 0.0189916
NAMPT nicotinamide phosphoribosyltransferase 0.0189909
SRRM1 serine/arginine repetitive matrix 1 0.0188883
RBM39 RNA binding motif protein 39 0.0188608
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0188213
VEGFA vascular endothelial growth factor A 0.0186327
FBXO32 F-box protein 32 0.0186121
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0183995
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0182669
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0180254
GADD45B growth arrest and DNA-damage-inducible, beta 0.0178781
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0177888
ZBTB38 zinc finger and BTB domain containing 38 0.017662
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0175144
UBE2B ubiquitin-conjugating enzyme E2B 0.0173841
ANKRD11 ankyrin repeat domain 11 0.0173372
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.0172152
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0171986
DUSP10 dual specificity phosphatase 10 0.0171119

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.343039
LPP LIM domain containing preferred translocation partner in lipoma -0.202686
TMSB10 thymosin beta 10 -0.127699
LAMC2 laminin, gamma 2 -0.117403
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.115133
ASPH aspartate beta-hydroxylase -0.111891
TMSB4X thymosin beta 4, X-linked -0.102983
ACTG1 actin gamma 1 -0.098858
TRIO trio Rho guanine nucleotide exchange factor -0.0973745
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.095009
TPT1 tumor protein, translationally-controlled 1 -0.0933817
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0853219
GRB10 growth factor receptor-bound protein 10 -0.0845012
AHNAK AHNAK nucleoprotein -0.0808054
NAV2 neuron navigator 2 -0.0787958
S100A6 S100 calcium binding protein A6 -0.077715
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0685599
ANXA2 annexin A2 -0.0680273
ERBIN erbb2 interacting protein -0.0667782
CCND1 cyclin D1 -0.0652362
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0643552
LIMCH1 LIM and calponin homology domains 1 -0.0635294
KRT7 keratin 7, type II -0.0631784
RPL35A ribosomal protein L35a -0.0615936
TPM4 tropomyosin 4 -0.059918
RAD21 RAD21 homolog (S. pombe) -0.0577474
PGK1 phosphoglycerate kinase 1 -0.0575951
PDLIM5 PDZ and LIM domain 5 -0.0562785
NPEPPS aminopeptidase puromycin sensitive -0.0556812
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0544839
CD2AP CD2-associated protein -0.0535413
FNDC3B fibronectin type III domain containing 3B -0.0533084
CANX calnexin -0.0516483
HMGA1 high mobility group AT-hook 1 -0.0515307
LDHA lactate dehydrogenase A -0.0506165
S100A10 S100 calcium binding protein A10 -0.0499768
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0491837
ADAM9 ADAM metallopeptidase domain 9 -0.0490432
OSBPL3 oxysterol binding protein-like 3 -0.0485549
RPL23 ribosomal protein L23 -0.0474549
IFI27 interferon, alpha-inducible protein 27 -0.047316
CAB39 calcium binding protein 39 -0.0466217
ESYT2 extended synaptotagmin-like protein 2 -0.0454173
POTEF POTE ankyrin domain family, member F -0.0450509
EPCAM epithelial cell adhesion molecule -0.0439975
F3 coagulation factor III (thromboplastin, tissue factor) -0.0437311
RPS24 ribosomal protein S24 -0.0432155
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0421531
NDRG1 N-myc downstream regulated 1 -0.0416865
KRT8 keratin 8, type II -0.04162
ZBTB20 zinc finger and BTB domain containing 20 -0.0411242
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0407774
ARHGAP5 Rho GTPase activating protein 5 -0.0401048
CTSB cathepsin B -0.0398568
PLEC plectin -0.0388342
ENO1 enolase 1, (alpha) -0.0387216
ARHGAP29 Rho GTPase activating protein 29 -0.0382059
ALCAM activated leukocyte cell adhesion molecule -0.0379766
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0374384
IFI16 interferon, gamma-inducible protein 16 -0.0370879
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0367818
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.036707
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0362844
PTMA prothymosin, alpha -0.0361306
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0360938
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0357793
IQGAP1 IQ motif containing GTPase activating protein 1 -0.035668
PKM pyruvate kinase, muscle -0.0354753
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0349462
VCL vinculin -0.0348122
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0334565
RPL34 ribosomal protein L34 -0.0333199
KRT18 keratin 18, type I -0.0330873
RNF213 ring finger protein 213 -0.0330293
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0327791
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0325084
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0324922
PTK2 protein tyrosine kinase 2 -0.0323318
LMO7 LIM domain 7 -0.0323035
GNAS GNAS complex locus -0.0319091
PATJ PATJ crumbs cell polarity complex component -0.0316265
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 -0.0314281
TMEM123 transmembrane protein 123 -0.0314162
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0313081
AHNAK2 AHNAK nucleoprotein 2 -0.0310853
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0307174
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0306536
NRIP1 nuclear receptor interacting protein 1 -0.0302594
RPLP1 ribosomal protein, large, P1 -0.0302275
OGA O-GlcNAcase -0.029929
ZNF217 zinc finger protein 217 -0.0298194
MAML2 mastermind-like 2 (Drosophila) -0.0297138
CRABP2 cellular retinoic acid binding protein 2 -0.0294877
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0292867
SMC4 structural maintenance of chromosomes 4 -0.0292744
PICALM phosphatidylinositol binding clathrin assembly protein -0.0292497
FAM3C family with sequence similarity 3, member C -0.0289254
ANTXR2 anthrax toxin receptor 2 -0.0288772
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.028848
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0287686