Idarubicin (hydrochloride)_SHP-77 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in SHP-77 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_SHP-77 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0634185
DOCK5 dedicator of cytokinesis 5 0.0585602
KIF26B kinesin family member 26B 0.0522701
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0510959
MX2 MX dynamin-like GTPase 2 0.048943
SDK1 sidekick cell adhesion molecule 1 0.0485194
RNF213 ring finger protein 213 0.0481098
IGFBP5 insulin-like growth factor binding protein 5 0.0472934
VGF VGF nerve growth factor inducible 0.045787
TRAPPC9 trafficking protein particle complex 9 0.0414155
MCTP1 multiple C2 domains, transmembrane 1 0.0410476
SNTG1 syntrophin, gamma 1 0.0405632
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0394084
STC1 stanniocalcin 1 0.0367616
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0356934
ASPH aspartate beta-hydroxylase 0.0352639
KCNB2 potassium channel, voltage gated Shab related subfamily B, member 2 0.0335734
GPC5 glypican 5 0.0326674
SLC38A2 solute carrier family 38, member 2 0.0312769
EXT1 exostosin glycosyltransferase 1 0.030931
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0307782
ZFHX3 zinc finger homeobox 3 0.0306765
SCFD2 sec1 family domain containing 2 0.0302637
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like 0.0301155
KCNJ6 potassium channel, inwardly rectifying subfamily J, member 6 0.0297304
NRG1 neuregulin 1 0.0295375
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0294073
RPTOR regulatory associated protein of MTOR, complex 1 0.0290947
STXBP5 syntaxin binding protein 5 (tomosyn) 0.0288046
RIGI RNA sensor RIG-I 0.0287625
EYA2 EYA transcriptional coactivator and phosphatase 2 0.0286734
DGKD diacylglycerol kinase, delta 130kDa 0.0286719
GSE1 Gse1 coiled-coil protein 0.0286193
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0278571
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0278049
DENND4A DENN/MADD domain containing 4A 0.0260197
PTCHD4 patched domain containing 4 0.0258
TBC1D22A TBC1 domain family, member 22A 0.0255848
RIMS2 regulating synaptic membrane exocytosis 2 0.025142
SP100 SP100 nuclear antigen 0.0250084
IFI6 interferon, alpha-inducible protein 6 0.0244584
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0243851
IFI27 interferon, alpha-inducible protein 27 0.0238888
COL22A1 collagen, type XXII, alpha 1 0.0236191
ZFAND3 zinc finger, AN1-type domain 3 0.0232717
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 0.0230992
ST18 suppression of tumorigenicity 18, zinc finger 0.023016
DOCK3 dedicator of cytokinesis 3 0.022682
PMP22 peripheral myelin protein 22 0.0223785
EGFR epidermal growth factor receptor 0.022298
PLSCR1 phospholipid scramblase 1 0.0218403
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0215197
SMYD3 SET and MYND domain containing 3 0.0213961
MACROD2 MACRO domain containing 2 0.0209663
CUX1 cut-like homeobox 1 0.0208887
AKAP12 A kinase (PRKA) anchor protein 12 0.02069
ZSWIM5 zinc finger, SWIM-type containing 5 0.0202402
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0201567
ANKRD36C ankyrin repeat domain 36C 0.0200923
FAM120B family with sequence similarity 120B 0.020054
PRRC2C proline-rich coiled-coil 2C 0.0194575
HSPA8 heat shock 70kDa protein 8 0.0192916
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0192861
ADAR adenosine deaminase, RNA-specific 0.0191859
GOLGB1 golgin B1 0.0191834
VAV2 vav 2 guanine nucleotide exchange factor 0.0191585
TSHZ2 teashirt zinc finger homeobox 2 0.0190675
CDK13 cyclin-dependent kinase 13 0.0190612
BACE2 beta-site APP-cleaving enzyme 2 0.0190479
GOSR2 golgi SNAP receptor complex member 2 0.0190319
GNG4 guanine nucleotide binding protein (G protein), gamma 4 0.0189282
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0188307
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 0.0187841
ZBTB20 zinc finger and BTB domain containing 20 0.0187552
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0187155
ZC3H12B zinc finger CCCH-type containing 12B 0.0186017
PIGL phosphatidylinositol glycan anchor biosynthesis, class L 0.0185273
SMG6 SMG6 nonsense mediated mRNA decay factor 0.0185214
PRKCE protein kinase C, epsilon 0.0183173
ZDHHC14 zinc finger, DHHC-type containing 14 0.0182735
LDLRAD4 low density lipoprotein receptor class A domain containing 4 0.0180649
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0179695
MCL1 myeloid cell leukemia 1 0.0178722
AGO3 argonaute RISC catalytic component 3 0.0178264
IGFBP2 insulin-like growth factor binding protein 2, 36kDa 0.0177447
PLXNA2 plexin A2 0.0176624
ERRFI1 ERBB receptor feedback inhibitor 1 0.0175166
ASIC2 acid sensing (proton gated) ion channel 2 0.0174779
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0174421
GPATCH2L G patch domain containing 2-like 0.017422
GCC2 GRIP and coiled-coil domain containing 2 0.0173289
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0171747
AP3B2 adaptor-related protein complex 3, beta 2 subunit 0.0170203
MYT1L myelin transcription factor 1-like 0.0169449
KDM5C lysine (K)-specific demethylase 5C 0.0168836
NAV1 neuron navigator 1 0.0168809
RAP1GAP2 RAP1 GTPase activating protein 2 0.0167639
SRSF4 serine/arginine-rich splicing factor 4 0.0166066
RABGAP1L RAB GTPase activating protein 1-like 0.0165556
RPS2 ribosomal protein S2 0.0164184

decreased expression

Symbol Name Standardized Value
PDE10A phosphodiesterase 10A -0.25907
TENM1 teneurin transmembrane protein 1 -0.255112
PTMA prothymosin, alpha -0.199401
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.168084
TOP2A topoisomerase (DNA) II alpha 170kDa -0.150068
CENPF centromere protein F, 350/400kDa -0.133134
PEG10 paternally expressed 10 -0.125402
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.111784
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0887053
CALCA calcitonin-related polypeptide alpha -0.0863699
PCSK1 proprotein convertase subtilisin/kexin type 1 -0.0777238
ENO1 enolase 1, (alpha) -0.0772601
ZNF292 zinc finger protein 292 -0.0767898
CPE carboxypeptidase E -0.0765875
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0716076
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0660301
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0635515
SINHCAF SIN3-HDAC complex associated factor -0.0624967
FTL ferritin, light polypeptide -0.0624258
MIS18BP1 MIS18 binding protein 1 -0.0608673
RAD21 RAD21 homolog (S. pombe) -0.0573831
TENT5A terminal nucleotidyltransferase 5A -0.0554028
CA8 carbonic anhydrase VIII -0.0552864
GRIK1 glutamate receptor, ionotropic, kainate 1 -0.0537921
PGK1 phosphoglycerate kinase 1 -0.0522792
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0518033
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0492468
PKM pyruvate kinase, muscle -0.0490224
MKI67 marker of proliferation Ki-67 -0.0484874
MAP1B microtubule-associated protein 1B -0.0483463
WDR45B WD repeat domain 45B -0.0481972
NAMPT nicotinamide phosphoribosyltransferase -0.0468422
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0459366
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0455402
PCM1 pericentriolar material 1 -0.0448421
PDE4B phosphodiesterase 4B, cAMP-specific -0.0448405
LOC112694756 uncharaterized LOC112694756 -0.0444242
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0435548
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0431286
ARB2A ARB2 cotranscriptional regulator A -0.0430823
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0425955
CADM1 cell adhesion molecule 1 -0.0424978
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0416175
CCDC88A coiled-coil domain containing 88A -0.0411338
NALF1 NALCN channel auxiliary factor 1 -0.0406258
SNAP25 synaptosomal-associated protein, 25kDa -0.0404421
FAM162A family with sequence similarity 162, member A -0.040206
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 -0.039267
NFIA nuclear factor I/A -0.0392641
SYT1 synaptotagmin I -0.0388401
HMGB2 high mobility group box 2 -0.0387894
SYT4 synaptotagmin IV -0.0387519
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0384498
NLGN1 neuroligin 1 -0.0381
NIPBL Nipped-B homolog (Drosophila) -0.0374977
NUF2 NUF2, NDC80 kinetochore complex component -0.0374638
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0371646
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0366255
TPX2 TPX2, microtubule-associated -0.0363452
ECT2 epithelial cell transforming 2 -0.036309
IRS2 insulin receptor substrate 2 -0.0362234
YBX1 Y box binding protein 1 -0.0360793
CKAP5 cytoskeleton associated protein 5 -0.0358378
SMC4 structural maintenance of chromosomes 4 -0.0358358
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0356138
NIPSNAP2 nipsnap homolog 2 -0.0353759
DTNA dystrobrevin, alpha -0.0349955
SGO2 shugoshin 2 -0.0348415
PGAP1 post-GPI attachment to proteins 1 -0.0347715
LDHA lactate dehydrogenase A -0.0347044
PDIA6 protein disulfide isomerase family A, member 6 -0.0345192
GAS2L3 growth arrest-specific 2 like 3 -0.0344441
MATR3 matrin 3 -0.0338841
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0329674
FAT1 FAT atypical cadherin 1 -0.0326278
POTEF POTE ankyrin domain family, member F -0.0321007
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0317933
CDCA2 cell division cycle associated 2 -0.0316608
RTN4 reticulon 4 -0.0315737
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0314422
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0312806
NRXN1 neurexin 1 -0.0310866
PBK PDZ binding kinase -0.0309432
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0307973
ATP5F1B ATP synthase F1 subunit beta -0.0306024
BHLHE40 basic helix-loop-helix family, member e40 -0.0305767
SEPTIN7 septin 7 -0.0305128
KNL1 kinetochore scaffold 1 -0.0304023
NUSAP1 nucleolar and spindle associated protein 1 -0.0303251
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0303089
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0302837
JAM3 junctional adhesion molecule 3 -0.0302038
TUBB tubulin, beta class I -0.0301484
CDH12 cadherin 12, type 2 (N-cadherin 2) -0.0300863
AFF1 AF4/FMR2 family, member 1 -0.0299553
S100A9 S100 calcium binding protein A9 -0.0299503
RPLP1 ribosomal protein, large, P1 -0.0294842
RLF rearranged L-myc fusion -0.0293765
PRC1 protein regulator of cytokinesis 1 -0.0292196
SASH1 SAM and SH3 domain containing 1 -0.0291578