Idarubicin (hydrochloride)_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0997632
GOLGA4 golgin A4 0.091422
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0758256
BOD1L1 biorientation of chromosomes in cell division 1-like 1 0.0698839
EGR1 early growth response 1 0.0698161
RPS12 ribosomal protein S12 0.0695945
SQSTM1 sequestosome 1 0.0647082
YBX3 Y box binding protein 3 0.059123
ERRFI1 ERBB receptor feedback inhibitor 1 0.0585732
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.055122
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0542026
EIF1 eukaryotic translation initiation factor 1 0.0541812
TPT1 tumor protein, translationally-controlled 1 0.0538305
RBM39 RNA binding motif protein 39 0.0533449
ARL15 ADP-ribosylation factor-like 15 0.0482729
FTH1 ferritin, heavy polypeptide 1 0.047578
TPI1 triosephosphate isomerase 1 0.0472384
TXNIP thioredoxin interacting protein 0.0460391
HLA-B major histocompatibility complex, class I, B 0.0450956
FUS FUS RNA binding protein 0.0450252
CAVIN1 caveolae associated protein 1 0.0427817
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0418126
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0401099
SMYD3 SET and MYND domain containing 3 0.0399185
JMJD1C jumonji domain containing 1C 0.0397881
KTN1 kinectin 1 (kinesin receptor) 0.0391366
CANX calnexin 0.0382386
H3-3B H3.3 histone B 0.038109
IPO7 importin 7 0.0376456
PRRC2B proline-rich coiled-coil 2B 0.0371112
NAP1L1 nucleosome assembly protein 1-like 1 0.0370756
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0369694
CHD4 chromodomain helicase DNA binding protein 4 0.0365226
EIF5B eukaryotic translation initiation factor 5B 0.0359165
EEF2 eukaryotic translation elongation factor 2 0.0359104
HLA-C major histocompatibility complex, class I, C 0.0347344
ATXN1L ataxin 1-like 0.0344208
AFF4 AF4/FMR2 family, member 4 0.0338831
GOLGB1 golgin B1 0.0335722
TPM3 tropomyosin 3 0.0333316
SRRM2 serine/arginine repetitive matrix 2 0.0328313
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0321477
NFE2L1 nuclear factor, erythroid 2-like 1 0.0321053
B2M beta-2-microglobulin 0.0318703
EZR ezrin 0.0318476
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0317637
STAT1 signal transducer and activator of transcription 1, 91kDa 0.031537
RIOK3 RIO kinase 3 0.0314242
R3HDM2 R3H domain containing 2 0.0313547
TTC3 tetratricopeptide repeat domain 3 0.031104
YAP1 Yes-associated protein 1 0.0309286
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0308176
BRD2 bromodomain containing 2 0.0305395
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0303574
HSPA8 heat shock 70kDa protein 8 0.0301234
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.0300038
NOP56 NOP56 ribonucleoprotein 0.0298357
RPL4 ribosomal protein L4 0.029766
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0297497
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0292229
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0286165
BRD4 bromodomain containing 4 0.0285824
NASP nuclear autoantigenic sperm protein (histone-binding) 0.0285014
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0284057
RTN4 reticulon 4 0.0278335
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 0.0277858
RPL26 ribosomal protein L26 0.0275977
RNF111 ring finger protein 111 0.0267475
RPS8 ribosomal protein S8 0.0265372
SFTPA2 surfactant protein A2 0.0264564
ANXA5 annexin A5 0.0264143
JUN jun proto-oncogene 0.0263369
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0262952
LHFPL6 LHFPL tetraspan subfamily member 6 0.0262926
BHLHE40 basic helix-loop-helix family, member e40 0.0262666
NOP58 NOP58 ribonucleoprotein 0.0260445
USP53 ubiquitin specific peptidase 53 0.026043
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0260202
HIP1 huntingtin interacting protein 1 0.0259383
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0258775
CHD8 chromodomain helicase DNA binding protein 8 0.0258554
RBMX RNA binding motif protein, X-linked 0.0257133
ANKZF1 ankyrin repeat and zinc finger domain containing 1 0.0253244
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0252121
DENND4A DENN/MADD domain containing 4A 0.0252044
BZW1 basic leucine zipper and W2 domains 1 0.0251732
LGALS12 lectin, galactoside-binding, soluble, 12 0.025115
KLF10 Kruppel-like factor 10 0.0248724
RALA v-ral simian leukemia viral oncogene homolog A (ras related) 0.0248461
FTL ferritin, light polypeptide 0.0248336
RPS6 ribosomal protein S6 0.0247403
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0246948
CLIP1 CAP-GLY domain containing linker protein 1 0.0246292
HLA-E major histocompatibility complex, class I, E 0.0245913
CUL5 cullin 5 0.0243152
CAPRIN2 caprin family member 2 0.0243115
NAMPT nicotinamide phosphoribosyltransferase 0.0242582
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 0.0239277
WWC2 WW and C2 domain containing 2 0.0238769
RACK1 receptor for activated C kinase 1 0.0238603

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.144665
LDHA lactate dehydrogenase A -0.130116
FNDC3B fibronectin type III domain containing 3B -0.114339
TMSB10 thymosin beta 10 -0.102479
DNER delta/notch-like EGF repeat containing -0.0829661
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0824712
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0743752
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0698493
PTMA prothymosin, alpha -0.0684961
INTS6 integrator complex subunit 6 -0.0679139
HMGA2 high mobility group AT-hook 2 -0.0663406
CD44 CD44 molecule (Indian blood group) -0.0654013
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0614248
POTEF POTE ankyrin domain family, member F -0.0612671
NAV2 neuron navigator 2 -0.0598844
NT5E 5'-nucleotidase, ecto (CD73) -0.0568151
SPAG9 sperm associated antigen 9 -0.0555711
TAS2R14 taste receptor, type 2, member 14 -0.0530757
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0513969
THSD4 thrombospondin, type I, domain containing 4 -0.0512012
PRELID2 PRELI domain containing 2 -0.0509419
ZNF292 zinc finger protein 292 -0.0485934
TPM4 tropomyosin 4 -0.0484068
CENPF centromere protein F, 350/400kDa -0.0474553
PKM pyruvate kinase, muscle -0.0466558
HJURP Holliday junction recognition protein -0.04627
PTK2 protein tyrosine kinase 2 -0.0459513
PDE8A phosphodiesterase 8A -0.0458845
HILPDA hypoxia inducible lipid droplet-associated -0.0452008
MBD5 methyl-CpG binding domain protein 5 -0.0442016
SETD5 SET domain containing 5 -0.0437029
PYGL phosphorylase, glycogen, liver -0.0434715
OSMR oncostatin M receptor -0.0428949
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0422155
FMN1 formin 1 -0.0413022
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.041083
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.040907
VCL vinculin -0.039918
NBEAL1 neurobeachin-like 1 -0.0397533
LPP LIM domain containing preferred translocation partner in lipoma -0.0391627
BIRC6 baculoviral IAP repeat containing 6 -0.0373653
NALCN sodium leak channel, non selective -0.0372192
AUH AU RNA binding protein/enoyl-CoA hydratase -0.0370284
RAI14 retinoic acid induced 14 -0.0368971
MCTP1 multiple C2 domains, transmembrane 1 -0.0362391
CELF1 CUGBP, Elav-like family member 1 -0.0356831
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0355062
ZBTB20 zinc finger and BTB domain containing 20 -0.0353834
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0351268
CHSY1 chondroitin sulfate synthase 1 -0.035012
USP34 ubiquitin specific peptidase 34 -0.0349041
NCEH1 neutral cholesterol ester hydrolase 1 -0.0347597
AKAP13 A kinase (PRKA) anchor protein 13 -0.034388
AKAP10 A kinase (PRKA) anchor protein 10 -0.0334636
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0332366
SCFD1 sec1 family domain containing 1 -0.0321306
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0320152
TBC1D5 TBC1 domain family, member 5 -0.0314522
ENO2 enolase 2 (gamma, neuronal) -0.0313369
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0311013
ANKRD28 ankyrin repeat domain 28 -0.0306949
PRH1 proline-rich protein HaeIII subfamily 1 -0.0305535
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0304955
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0303949
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase -0.0296708
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0296169
DIAPH3 diaphanous-related formin 3 -0.0293908
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -0.0292604
TPX2 TPX2, microtubule-associated -0.0286188
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0285528
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0285103
MT2A metallothionein 2A -0.0280724
HBS1L HBS1-like translational GTPase -0.0280226
SGO2 shugoshin 2 -0.0278702
PRSS23 protease, serine, 23 -0.0276215
R3HDM1 R3H domain containing 1 -0.027435
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0270899
CKAP2 cytoskeleton associated protein 2 -0.0270215
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0269221
PBX3 pre-B-cell leukemia homeobox 3 -0.0268914
SBF2 SET binding factor 2 -0.0268644
ACER3 alkaline ceramidase 3 -0.0267941
SS18 synovial sarcoma translocation, chromosome 18 -0.0263833
ARMH4 armadillo like helical domain containing 4 -0.0263352
SMC4 structural maintenance of chromosomes 4 -0.0262957
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0262128
ATXN1 ataxin 1 -0.0261269
NF1 neurofibromin 1 -0.0260989
PRKCE protein kinase C, epsilon -0.0260569
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0260287
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0259639
SMAP1 small ArfGAP 1 -0.0258818
BASP1 brain abundant, membrane attached signal protein 1 -0.0258036
TRIP12 thyroid hormone receptor interactor 12 -0.0255
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0254013
SNX14 sorting nexin 14 -0.025333
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0253238
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0253213
NIBAN2 niban apoptosis regulator 2 -0.0252225
ARHGAP18 Rho GTPase activating protein 18 -0.0249636