Idarubicin (hydrochloride)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Idarubicin (hydrochloride) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Idarubicin (hydrochloride)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.143855
RPS12 ribosomal protein S12 0.0789431
RPS2 ribosomal protein S2 0.0728846
AKAP12 A kinase (PRKA) anchor protein 12 0.0699635
HSPA8 heat shock 70kDa protein 8 0.0661016
EZR ezrin 0.0659457
FTH1 ferritin, heavy polypeptide 1 0.0588488
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0545801
TPM3 tropomyosin 3 0.0533269
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0484438
TUBA1B tubulin, alpha 1b 0.0454109
IPO7 importin 7 0.0438427
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0426172
FRMD5 FERM domain containing 5 0.0401513
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0395079
MKI67 marker of proliferation Ki-67 0.0388304
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0381902
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0379067
IGF2 insulin-like growth factor 2 0.0378796
SET SET nuclear proto-oncogene 0.0373734
APLP2 amyloid beta (A4) precursor-like protein 2 0.0372659
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0371251
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0360285
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0357746
RPL4 ribosomal protein L4 0.0355411
PA2G4 proliferation-associated 2G4, 38kDa 0.0345976
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0344049
RTN4 reticulon 4 0.0340394
KTN1 kinectin 1 (kinesin receptor) 0.0339189
EIF5B eukaryotic translation initiation factor 5B 0.0338771
WNK1 WNK lysine deficient protein kinase 1 0.032161
TPI1 triosephosphate isomerase 1 0.0318728
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0318545
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0306036
TIMP2 TIMP metallopeptidase inhibitor 2 0.0305325
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0304566
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0303427
STMN1 stathmin 1 0.0302732
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0300087
SYNE2 spectrin repeat containing, nuclear envelope 2 0.029518
SRRM2 serine/arginine repetitive matrix 2 0.0288059
B2M beta-2-microglobulin 0.0287322
BACE2 beta-site APP-cleaving enzyme 2 0.0286657
PCBP2 poly(rC) binding protein 2 0.0284496
WBP11 WW domain binding protein 11 0.0283381
LOC102724023 ES1 protein homolog, mitochondrial 0.0283229
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0280362
ZFP36L1 ZFP36 ring finger protein-like 1 0.0274687
GNAS GNAS complex locus 0.027455
MACF1 microtubule-actin crosslinking factor 1 0.0274157
SMC1A structural maintenance of chromosomes 1A 0.0272967
NFE2L1 nuclear factor, erythroid 2-like 1 0.0267439
HMGN2 high mobility group nucleosomal binding domain 2 0.0266275
YBX3 Y box binding protein 3 0.026621
SOX9 SRY (sex determining region Y)-box 9 0.0263372
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0262504
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0260241
ITGA6 integrin, alpha 6 0.0256251
SSH2 slingshot protein phosphatase 2 0.0255772
BCLAF1 BCL2-associated transcription factor 1 0.0252876
GOLGA4 golgin A4 0.0250415
SYAP1 synapse associated protein 1 0.0246965
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0246238
KDM2A lysine (K)-specific demethylase 2A 0.0246051
HLA-E major histocompatibility complex, class I, E 0.0245934
CAPN2 calpain 2, (m/II) large subunit 0.0244474
PRRC2B proline-rich coiled-coil 2B 0.0243478
PRDX1 peroxiredoxin 1 0.0242123
MSN moesin 0.0239536
EMP1 epithelial membrane protein 1 0.0235249
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.0233492
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0233221
PDIA3 protein disulfide isomerase family A, member 3 0.0232787
GOLGB1 golgin B1 0.0231362
RABEP1 rabaptin, RAB GTPase binding effector protein 1 0.0231356
FAM111B family with sequence similarity 111, member B 0.0229588
KIF5B kinesin family member 5B 0.0226629
NOP56 NOP56 ribonucleoprotein 0.0219045
ANO1 anoctamin 1, calcium activated chloride channel 0.0218314
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0218012
PNN pinin, desmosome associated protein 0.0216974
SAMD4A sterile alpha motif domain containing 4A 0.0215126
DSPP dentin sialophosphoprotein 0.0214443
TMA7 translation machinery associated 7 homolog (S. cerevisiae) 0.0214428
HLA-B major histocompatibility complex, class I, B 0.0213628
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0210542
ZEB1 zinc finger E-box binding homeobox 1 0.0209888
CYCS cytochrome c, somatic 0.0207759
CD9 CD9 molecule 0.0207696
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0207489
TLN1 talin 1 0.020624
DCAF7 DDB1 and CUL4 associated factor 7 0.0206124
HSPA4 heat shock 70kDa protein 4 0.0204425
CD44 CD44 molecule (Indian blood group) 0.0204225
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0203807
BRCA1 breast cancer 1, early onset 0.0203333
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 0.0202358
DSTN destrin (actin depolymerizing factor) 0.0201941
RBBP6 retinoblastoma binding protein 6 0.020189
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0200992

decreased expression

Symbol Name Standardized Value
NKD1 naked cuticle homolog 1 (Drosophila) -0.191524
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.177447
TMSB10 thymosin beta 10 -0.136246
INTS6 integrator complex subunit 6 -0.135445
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.127424
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.122279
PGK1 phosphoglycerate kinase 1 -0.09147
RPL35A ribosomal protein L35a -0.0883871
SYT1 synaptotagmin I -0.0883784
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0876902
RPS24 ribosomal protein S24 -0.072982
ACTG1 actin gamma 1 -0.0674901
KRT8 keratin 8, type II -0.0669538
ACTN4 actinin, alpha 4 -0.066394
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0658278
KRT18 keratin 18, type I -0.064009
ATXN1 ataxin 1 -0.0612848
RPLP1 ribosomal protein, large, P1 -0.0605395
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0573341
RPL23 ribosomal protein L23 -0.0565599
PDE4D phosphodiesterase 4D, cAMP-specific -0.0549573
LDHA lactate dehydrogenase A -0.0542173
MAML2 mastermind-like 2 (Drosophila) -0.0502541
CD46 CD46 molecule, complement regulatory protein -0.0498138
RPL11 ribosomal protein L11 -0.0486292
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0485502
OXR1 oxidation resistance 1 -0.0482905
ZBTB20 zinc finger and BTB domain containing 20 -0.0463383
CDH13 cadherin 13 -0.0462753
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0452762
ETNK1 ethanolamine kinase 1 -0.0451676
FYN FYN proto-oncogene, Src family tyrosine kinase -0.0425781
WDFY2 WD repeat and FYVE domain containing 2 -0.0422739
PERP PERP, TP53 apoptosis effector -0.0395815
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0390582
MORF4L2 mortality factor 4 like 2 -0.0387963
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0370903
RPL19 ribosomal protein L19 -0.0369927
IARS1 isoleucyl-tRNA synthetase 1 -0.0368495
RPLP0 ribosomal protein, large, P0 -0.0363854
TNS3 tensin 3 -0.0352971
CEMIP2 cell migration inducing hyaluronidase 2 -0.0350435
RPL32 ribosomal protein L32 -0.0349815
TMEM123 transmembrane protein 123 -0.0342359
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 -0.0340911
RPS23 ribosomal protein S23 -0.0339502
ENO1 enolase 1, (alpha) -0.0339008
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0329041
RPL31 ribosomal protein L31 -0.0323933
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0323251
PROX1 prospero homeobox 1 -0.0320358
RPL27A ribosomal protein L27a -0.0317792
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0316141
RPS21 ribosomal protein S21 -0.0315984
TFRC transferrin receptor -0.0315324
RPLP2 ribosomal protein, large, P2 -0.0311824
TAS2R14 taste receptor, type 2, member 14 -0.0311508
ANKRD10 ankyrin repeat domain 10 -0.030225
THOC2 THO complex 2 -0.0295463
RUNX1 runt-related transcription factor 1 -0.0294442
CCND1 cyclin D1 -0.0290039
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0287674
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0285108
MT2A metallothionein 2A -0.0283683
HDAC4 histone deacetylase 4 -0.0280019
RPL34 ribosomal protein L34 -0.0279362
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0277534
USP9X ubiquitin specific peptidase 9, X-linked -0.0276386
GARS1 glycyl-tRNA synthetase 1 -0.0270138
POTEF POTE ankyrin domain family, member F -0.0268967
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.026602
NAV2 neuron navigator 2 -0.0264765
VDAC1 voltage-dependent anion channel 1 -0.0262042
MYL12B myosin, light chain 12B, regulatory -0.025938
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0256951
MED21 mediator complex subunit 21 -0.0254759
RPL7 ribosomal protein L7 -0.0254554
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0253989
MON2 MON2 homolog (S. cerevisiae) -0.0252703
RPS5 ribosomal protein S5 -0.0250958
PHF14 PHD finger protein 14 -0.0250506
LOC112694756 uncharaterized LOC112694756 -0.0248044
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.024616
MBD5 methyl-CpG binding domain protein 5 -0.0240799
PCLO piccolo presynaptic cytomatrix protein -0.0239893
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.023941
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0236789
SECISBP2 SECIS binding protein 2 -0.0236683
RNF43 ring finger protein 43 -0.0235984
RBMX RNA binding motif protein, X-linked -0.0234367
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0233371
ADGRL2 adhesion G protein-coupled receptor L2 -0.023225
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0230129
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0229967
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0229933
BIRC6 baculoviral IAP repeat containing 6 -0.0228629
ZMYM2 zinc finger, MYM-type 2 -0.0228306
RERE arginine-glutamic acid dipeptide (RE) repeats -0.022641
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0225396
RCC1 regulator of chromosome condensation 1 -0.0225089