Imiquimod (hydrochloride)_C32 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Imiquimod (hydrochloride) perturbation in C32 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Imiquimod (hydrochloride)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.258478
VGF VGF nerve growth factor inducible 0.0806601
NAMPT nicotinamide phosphoribosyltransferase 0.0645226
CD109 CD109 molecule 0.0548315
TNNC1 troponin C type 1 (slow) 0.052738
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0523216
ICAM1 intercellular adhesion molecule 1 0.0446811
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0439784
RNF145 ring finger protein 145 0.0430954
EEF2 eukaryotic translation elongation factor 2 0.0427148
SPRED1 sprouty-related, EVH1 domain containing 1 0.0424778
CDC73 cell division cycle 73 0.0410899
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0392326
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0389567
APP amyloid beta (A4) precursor protein 0.0384731
KMT2C lysine (K)-specific methyltransferase 2C 0.0372378
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0371213
NAV2 neuron navigator 2 0.0360957
ZYX zyxin 0.0359078
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0348558
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0346577
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0341596
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0337606
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.033138
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0325748
A2M alpha-2-macroglobulin 0.0321513
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0304799
PRELID2 PRELI domain containing 2 0.0304743
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0301703
WASL Wiskott-Aldrich syndrome-like 0.0300853
FBXO7 F-box protein 7 0.0291123
PI15 peptidase inhibitor 15 0.0289754
RPL3 ribosomal protein L3 0.028942
HELZ helicase with zinc finger 0.0285666
RBM33 RNA binding motif protein 33 0.0282267
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0280594
MACF1 microtubule-actin crosslinking factor 1 0.0268172
NBAS neuroblastoma amplified sequence 0.0265441
EIF4H eukaryotic translation initiation factor 4H 0.0263398
SDC2 syndecan 2 0.0262069
ARRDC3 arrestin domain containing 3 0.0259072
UBE2H ubiquitin-conjugating enzyme E2H 0.025889
SMAD3 SMAD family member 3 0.0247608
MKRN1 makorin ring finger protein 1 0.0245583
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0243432
ANXA5 annexin A5 0.0238686
AHR aryl hydrocarbon receptor 0.0234365
PKM pyruvate kinase, muscle 0.0231586
DST dystonin 0.0231389
FLNA filamin A, alpha 0.0229182
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0228347
CHSY1 chondroitin sulfate synthase 1 0.0225168
USP9X ubiquitin specific peptidase 9, X-linked 0.0222323
INSIG2 insulin induced gene 2 0.0220539
UBC ubiquitin C 0.0219612
RHEB Ras homolog enriched in brain 0.0217533
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.021748
MRTFA myocardin related transcription factor A 0.0217419
RTN4 reticulon 4 0.0216987
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0210868
PGK1 phosphoglycerate kinase 1 0.0207528
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0206417
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0203774
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0202994
KDM6A lysine (K)-specific demethylase 6A 0.0201202
RIPK4 receptor-interacting serine-threonine kinase 4 0.0196542
CSNK1A1 casein kinase 1, alpha 1 0.0195098
BHLHE40 basic helix-loop-helix family, member e40 0.0193299
CD59 CD59 molecule, complement regulatory protein 0.0189129
MIDEAS mitotic deacetylase associated SANT domain protein 0.0186741
NCKAP1 NCK-associated protein 1 0.0186308
GAS7 growth arrest-specific 7 0.0184777
FNDC3B fibronectin type III domain containing 3B 0.0182834
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0179775
PUM2 pumilio RNA-binding family member 2 0.017582
CNN3 calponin 3, acidic 0.0173952
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0172782
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0172694
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.017228
ACTN1 actinin, alpha 1 0.0170606
SFTPA2 surfactant protein A2 0.0168008
AHNAK AHNAK nucleoprotein 0.0167805
MARCHF6 membrane associated ring-CH-type finger 6 0.0166889
VMP1 vacuole membrane protein 1 0.0165817
ZNF608 zinc finger protein 608 0.0163708
TRIB1 tribbles pseudokinase 1 0.016234
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0160897
FOXJ3 forkhead box J3 0.0160369
ESYT2 extended synaptotagmin-like protein 2 0.0157435
MYH9 myosin, heavy chain 9, non-muscle 0.0157128
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0156567
RANBP2 RAN binding protein 2 0.0155456
BIRC2 baculoviral IAP repeat containing 2 0.0154959
NUMA1 nuclear mitotic apparatus protein 1 0.0154214
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0153123
CALU calumenin 0.0152887
CORO1C coronin, actin binding protein, 1C 0.0152677
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 0.0151033
SPTBN1 spectrin, beta, non-erythrocytic 1 0.015045
DHFR dihydrofolate reductase 0.0150428

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0909379
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0873497
VIM vimentin -0.0867678
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0860202
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0837002
NLGN1 neuroligin 1 -0.0711012
GPC6 glypican 6 -0.0664351
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0609937
IGFBP5 insulin-like growth factor binding protein 5 -0.0608149
TMSB10 thymosin beta 10 -0.0528727
EHBP1 EH domain binding protein 1 -0.0449282
S100A6 S100 calcium binding protein A6 -0.0439191
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0419823
HLA-B major histocompatibility complex, class I, B -0.0418168
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0400313
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0398399
OXR1 oxidation resistance 1 -0.0372519
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0350474
RUNX1 runt-related transcription factor 1 -0.0350186
RPLP1 ribosomal protein, large, P1 -0.0349333
ACTG1 actin gamma 1 -0.0348503
EGR1 early growth response 1 -0.0344843
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0334647
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0333048
IER3 immediate early response 3 -0.0326479
HILPDA hypoxia inducible lipid droplet-associated -0.0323411
IGFBP3 insulin-like growth factor binding protein 3 -0.0305079
SCFD2 sec1 family domain containing 2 -0.0304874
LRRC23 leucine rich repeat containing 23 -0.03021
AKAP9 A kinase (PRKA) anchor protein 9 -0.0299717
CDK14 cyclin-dependent kinase 14 -0.0285844
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0283513
RNF24 ring finger protein 24 -0.0271873
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0271615
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.027155
IFI16 interferon, gamma-inducible protein 16 -0.0269757
PTPRD protein tyrosine phosphatase, receptor type, D -0.0267905
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0266365
PCDH7 protocadherin 7 -0.0264298
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0259421
MACROD2 MACRO domain containing 2 -0.0248637
ZMYND8 zinc finger, MYND-type containing 8 -0.0246123
BCAS3 breast carcinoma amplified sequence 3 -0.0244067
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0243421
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0240122
KDM2A lysine (K)-specific demethylase 2A -0.0239939
FBXO11 F-box protein 11 -0.02361
MYO1E myosin IE -0.0233576
AKAP12 A kinase (PRKA) anchor protein 12 -0.0232678
SOX5 SRY (sex determining region Y)-box 5 -0.0231713
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0229097
JMJD1C jumonji domain containing 1C -0.0229028
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0226111
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0221653
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0217371
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0213537
CALD1 caldesmon 1 -0.0213109
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.0206176
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0205907
GNAS GNAS complex locus -0.0201978
MAML3 mastermind-like 3 (Drosophila) -0.0201571
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.019998
HMGA2 high mobility group AT-hook 2 -0.0198136
MRPS6 mitochondrial ribosomal protein S6 -0.0196597
GLG1 golgi glycoprotein 1 -0.0194124
LOC102724023 ES1 protein homolog, mitochondrial -0.0194043
EXOC4 exocyst complex component 4 -0.0192696
WSB1 WD repeat and SOCS box containing 1 -0.0191495
ZNF704 zinc finger protein 704 -0.0191215
NEGR1 neuronal growth regulator 1 -0.0190697
NAV3 neuron navigator 3 -0.0190291
PDIA4 protein disulfide isomerase family A, member 4 -0.0188292
DIAPH2 diaphanous-related formin 2 -0.0186853
MEIS2 Meis homeobox 2 -0.0185953
RPS8 ribosomal protein S8 -0.0183774
JUN jun proto-oncogene -0.0182432
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0179303
RPL35A ribosomal protein L35a -0.0176478
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0176118
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0175289
PHACTR4 phosphatase and actin regulator 4 -0.0175243
S100A9 S100 calcium binding protein A9 -0.0174653
TLE4 transducin-like enhancer of split 4 -0.0174625
RPS6 ribosomal protein S6 -0.0172371
PTMA prothymosin, alpha -0.0171911
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.017161
CUX1 cut-like homeobox 1 -0.0170912
FRMD5 FERM domain containing 5 -0.0169443
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.016751
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.0167456
RPS12 ribosomal protein S12 -0.0166548
AEBP2 AE binding protein 2 -0.0162814
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0157658
RBM25 RNA binding motif protein 25 -0.0156777
PTCHD4 patched domain containing 4 -0.0156181
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0155142
MTDH metadherin -0.015513
PDIA3 protein disulfide isomerase family A, member 3 -0.0155092
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.0154782
RPL37A ribosomal protein L37a -0.0151698