Imiquimod (hydrochloride)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Imiquimod (hydrochloride) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Imiquimod (hydrochloride)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0833777
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0802372
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0724171
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0699106
TMSB4X thymosin beta 4, X-linked 0.0669698
POTEF POTE ankyrin domain family, member F 0.0574706
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0501976
MYH9 myosin, heavy chain 9, non-muscle 0.0469307
MEF2A myocyte enhancer factor 2A 0.0447626
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0415842
NUP58 nucleoporin 58 0.0400019
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0398677
CCNL1 cyclin L1 0.0396877
NAMPT nicotinamide phosphoribosyltransferase 0.0373831
ADAM9 ADAM metallopeptidase domain 9 0.0366876
UBC ubiquitin C 0.0350065
SPAG9 sperm associated antigen 9 0.0337455
CD46 CD46 molecule, complement regulatory protein 0.0331369
TNIP1 TNFAIP3 interacting protein 1 0.0327157
MT1X metallothionein 1X 0.0323734
RPL3 ribosomal protein L3 0.0322844
PLAU plasminogen activator, urokinase 0.0317601
DDIT4 DNA-damage-inducible transcript 4 0.0311141
HSPA8 heat shock 70kDa protein 8 0.0307003
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0304642
FOSL1 FOS-like antigen 1 0.0304241
EZR ezrin 0.0289273
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0287997
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0283858
NDRG1 N-myc downstream regulated 1 0.0283091
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0280715
FLNA filamin A, alpha 0.0275135
CASC3 cancer susceptibility candidate 3 0.0262337
KLF6 Kruppel-like factor 6 0.0262135
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0261173
TPM3 tropomyosin 3 0.0260882
MCTP1 multiple C2 domains, transmembrane 1 0.0256223
SMAD3 SMAD family member 3 0.0255231
UBA6 ubiquitin-like modifier activating enzyme 6 0.0253052
ABI1 abl-interactor 1 0.0249059
EEF2 eukaryotic translation elongation factor 2 0.024613
FXR1 fragile X mental retardation, autosomal homolog 1 0.0244516
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0241695
TFG TRK-fused gene 0.0237445
FAM13A family with sequence similarity 13, member A 0.0236197
ARRDC3 arrestin domain containing 3 0.0234676
RACK1 receptor for activated C kinase 1 0.0229156
SNX9 sorting nexin 9 0.0228142
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0224109
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 0.0220702
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0219331
ARL5B ADP-ribosylation factor-like 5B 0.0218218
IRF6 interferon regulatory factor 6 0.0218141
GSK3B glycogen synthase kinase 3 beta 0.0214512
YBX1 Y box binding protein 1 0.0212852
CTNND1 catenin (cadherin-associated protein), delta 1 0.0210106
TSC22D2 TSC22 domain family, member 2 0.020939
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.0205196
YTHDC1 YTH domain containing 1 0.0201502
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0201484
BHLHE40 basic helix-loop-helix family, member e40 0.0200325
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0197833
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0197671
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0197301
PNN pinin, desmosome associated protein 0.0193265
APLP2 amyloid beta (A4) precursor-like protein 2 0.0193221
PEG10 paternally expressed 10 0.0192036
NCKAP1 NCK-associated protein 1 0.0191746
SRRM2 serine/arginine repetitive matrix 2 0.0189981
G0S2 G0/G1 switch 2 0.018869
INSIG2 insulin induced gene 2 0.0187695
TOP1 topoisomerase (DNA) I 0.0186228
RAB8B RAB8B, member RAS oncogene family 0.0185828
PRRC2C proline-rich coiled-coil 2C 0.0185148
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0184857
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0184807
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0183758
RASA2 RAS p21 protein activator 2 0.0179808
KMT2E lysine (K)-specific methyltransferase 2E 0.0179136
AKAP13 A kinase (PRKA) anchor protein 13 0.0176233
KRT18 keratin 18, type I 0.0176011
RPL4 ribosomal protein L4 0.0174884
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0174333
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0171163
ATP13A3 ATPase type 13A3 0.0168476
ZFC3H1 zinc finger, C3H1-type containing 0.0167469
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0163535
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0162813
MCL1 myeloid cell leukemia 1 0.0162792
LOC112694756 uncharaterized LOC112694756 0.0162736
EIF4A2 eukaryotic translation initiation factor 4A2 0.0159525
RAD21 RAD21 homolog (S. pombe) 0.0159295
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0155547
PPARD peroxisome proliferator-activated receptor delta 0.015523
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0154718
PUM1 pumilio RNA-binding family member 1 0.0153863
FAM162A family with sequence similarity 162, member A 0.0153381
TUBB tubulin, beta class I 0.0152405
CD83 CD83 molecule 0.0151446
AFDN afadin, adherens junction formation factor 0.01511

decreased expression

Symbol Name Standardized Value
HLA-B major histocompatibility complex, class I, B -0.111257
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0984572
IGFBP3 insulin-like growth factor binding protein 3 -0.0974317
CP ceruloplasmin (ferroxidase) -0.0931356
MMP7 matrix metallopeptidase 7 -0.0917092
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0895974
IFI27 interferon, alpha-inducible protein 27 -0.0719108
TPT1 tumor protein, translationally-controlled 1 -0.0711724
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0669002
MAML2 mastermind-like 2 (Drosophila) -0.062055
EFNA5 ephrin-A5 -0.0614165
VIM vimentin -0.0608295
TMSB10 thymosin beta 10 -0.0593462
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0586173
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0542917
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.054203
FTL ferritin, light polypeptide -0.0540253
SP100 SP100 nuclear antigen -0.052478
RNF213 ring finger protein 213 -0.0514083
ISG15 ISG15 ubiquitin-like modifier -0.0509917
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0502929
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0496083
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0485348
RPL35A ribosomal protein L35a -0.048177
APOL1 apolipoprotein L, 1 -0.0453002
RPS29 ribosomal protein S29 -0.044895
MX1 MX dynamin-like GTPase 1 -0.0443817
EXT1 exostosin glycosyltransferase 1 -0.0433013
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0424178
NRG3 neuregulin 3 -0.0422295
PCDH7 protocadherin 7 -0.0421507
LPP LIM domain containing preferred translocation partner in lipoma -0.03962
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0387573
MT2A metallothionein 2A -0.0383517
MX2 MX dynamin-like GTPase 2 -0.0380384
IFI6 interferon, alpha-inducible protein 6 -0.0376956
KRT19 keratin 19, type I -0.0374087
RAD51B RAD51 paralog B -0.0372539
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0372328
IFITM1 interferon induced transmembrane protein 1 -0.0372001
PDE4D phosphodiesterase 4D, cAMP-specific -0.0369374
ATXN1 ataxin 1 -0.0368192
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.036694
FNDC3B fibronectin type III domain containing 3B -0.036276
S100A10 S100 calcium binding protein A10 -0.036007
PARD3 par-3 family cell polarity regulator -0.0359292
PRKCA protein kinase C, alpha -0.0358271
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0356391
NABP1 nucleic acid binding protein 1 -0.0352994
MYO1E myosin IE -0.0352812
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0351441
HLA-E major histocompatibility complex, class I, E -0.0345489
TMC5 transmembrane channel-like 5 -0.0341564
RPLP1 ribosomal protein, large, P1 -0.0340472
S100A6 S100 calcium binding protein A6 -0.0337797
BLZF1 basic leucine zipper nuclear factor 1 -0.0335468
LMO7 LIM domain 7 -0.0334282
RUNX1 runt-related transcription factor 1 -0.0333585
PKM pyruvate kinase, muscle -0.0333486
NT5C2 5'-nucleotidase, cytosolic II -0.0333246
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0331362
SAMD4A sterile alpha motif domain containing 4A -0.0327385
RIGI RNA sensor RIG-I -0.0326324
TM4SF1 transmembrane 4 L six family member 1 -0.0325356
TBC1D22A TBC1 domain family, member 22A -0.0323828
PTMA prothymosin, alpha -0.0322716
ENO1 enolase 1, (alpha) -0.0321535
DST dystonin -0.0318895
LAMB3 laminin, beta 3 -0.0314833
ANXA2 annexin A2 -0.0313717
RPL34 ribosomal protein L34 -0.0313386
MT1E metallothionein 1E -0.0311789
GOLGB1 golgin B1 -0.0311191
HMGA2 high mobility group AT-hook 2 -0.0309597
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0309339
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0308955
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0303962
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0303049
RPL31 ribosomal protein L31 -0.0302464
PMP22 peripheral myelin protein 22 -0.0300772
B2M beta-2-microglobulin -0.0300571
C15ORF48 chromosome 15 open reading frame 48 -0.0300258
FBXO11 F-box protein 11 -0.0295792
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0295417
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0294784
RABGAP1L RAB GTPase activating protein 1-like -0.02932
RPS8 ribosomal protein S8 -0.0289287
MCU mitochondrial calcium uniporter -0.0286504
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0285677
RPL19 ribosomal protein L19 -0.028327
NPAS2 neuronal PAS domain protein 2 -0.02827
SLC38A1 solute carrier family 38, member 1 -0.0281693
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.028006
LOC102724023 ES1 protein homolog, mitochondrial -0.0279163
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.027835
RASAL2 RAS protein activator like 2 -0.0277502
ZBTB20 zinc finger and BTB domain containing 20 -0.0274575
RAB7A RAB7A, member RAS oncogene family -0.027233
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0272309
GREB1L growth regulation by estrogen in breast cancer-like -0.0271995