Imiquimod (hydrochloride)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Imiquimod (hydrochloride) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Imiquimod (hydrochloride)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.155447
FN1 fibronectin 1 0.129854
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0912227
APOB apolipoprotein B 0.0816484
C3 complement component 3 0.0807611
EEF2 eukaryotic translation elongation factor 2 0.0751296
FNDC3B fibronectin type III domain containing 3B 0.0716621
SAMD4A sterile alpha motif domain containing 4A 0.0696248
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0667789
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0653438
DSPP dentin sialophosphoprotein 0.0592647
RPL3 ribosomal protein L3 0.0570974
NKD1 naked cuticle homolog 1 (Drosophila) 0.0545075
MACF1 microtubule-actin crosslinking factor 1 0.045315
SOD2 superoxide dismutase 2, mitochondrial 0.0434163
ELL2 elongation factor, RNA polymerase II, 2 0.0419414
MYH9 myosin, heavy chain 9, non-muscle 0.0409938
SMAD3 SMAD family member 3 0.040886
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0405333
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0398966
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0395187
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0390703
AFDN afadin, adherens junction formation factor 0.0385392
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0372268
DSCAM Down syndrome cell adhesion molecule 0.0364866
FAT1 FAT atypical cadherin 1 0.0346558
LRMDA leucine rich melanocyte differentiation associated 0.0336515
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.033357
VCL vinculin 0.0330978
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0326927
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0320969
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0303073
MALT1 MALT1 paracaspase 0.0301038
ARHGAP9 Rho GTPase activating protein 9 0.0291632
EPAS1 endothelial PAS domain protein 1 0.0290873
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0283329
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0280157
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0276734
DOCK4 dedicator of cytokinesis 4 0.027433
VMP1 vacuole membrane protein 1 0.0272236
SHB Src homology 2 domain containing adaptor protein B 0.0265953
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0254467
PLEC plectin 0.0253032
TNS1 tensin 1 0.0251637
KIF1B kinesin family member 1B 0.0247619
ZMIZ1 zinc finger, MIZ-type containing 1 0.0247086
NCKAP1 NCK-associated protein 1 0.0238682
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0234474
RPL4 ribosomal protein L4 0.0234456
ANO6 anoctamin 6 0.023384
JAG1 jagged 1 0.0230739
DHFR dihydrofolate reductase 0.0230275
CORO1C coronin, actin binding protein, 1C 0.0229366
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0227221
PDZD8 PDZ domain containing 8 0.0226617
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0226092
CFB complement factor B 0.02253
PEG3 paternally expressed 3 0.0225188
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0222166
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0221423
HSPA8 heat shock 70kDa protein 8 0.0217186
FOXO1 forkhead box O1 0.021566
CUL3 cullin 3 0.0214419
PAWR PRKC, apoptosis, WT1, regulator 0.0211531
IGF2R insulin-like growth factor 2 receptor 0.0210533
FAM107B family with sequence similarity 107, member B 0.0210066
CSNK1A1 casein kinase 1, alpha 1 0.0209616
ABAT 4-aminobutyrate aminotransferase 0.0207841
WDFY2 WD repeat and FYVE domain containing 2 0.0207105
MBNL3 muscleblind-like splicing regulator 3 0.0198744
SIK3 SIK family kinase 3 0.0198072
TRIO trio Rho guanine nucleotide exchange factor 0.0197884
KDM3A lysine (K)-specific demethylase 3A 0.0197747
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.019659
ATXN1 ataxin 1 0.0195996
TOP1 topoisomerase (DNA) I 0.0193171
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0193027
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0191713
ITGB5 integrin, beta 5 0.0190231
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.018814
ABTB3 ankyrin repeat and BTB domain containing 3 0.0186449
PCBP2 poly(rC) binding protein 2 0.018493
DIAPH1 diaphanous-related formin 1 0.0183499
MRTFA myocardin related transcription factor A 0.0182672
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0182302
HLF hepatic leukemia factor 0.0182203
ANXA5 annexin A5 0.0181
FOXO3 forkhead box O3 0.0179283
JAK1 Janus kinase 1 0.0178428
KIF5B kinesin family member 5B 0.0178077
SVIL supervillin 0.0176473
SRRM1 serine/arginine repetitive matrix 1 0.01764
EXT1 exostosin glycosyltransferase 1 0.0176183
SKIL SKI-like proto-oncogene 0.0175326
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0175256
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0173718
MAN1A1 mannosidase, alpha, class 1A, member 1 0.017355
HDLBP high density lipoprotein binding protein 0.0173085
FERMT2 fermitin family member 2 0.0171547
NCOA4 nuclear receptor coactivator 4 0.0170949

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.333479
MT2A metallothionein 2A -0.0979624
TPT1 tumor protein, translationally-controlled 1 -0.0786234
RPS6 ribosomal protein S6 -0.0700634
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0662899
AKAP12 A kinase (PRKA) anchor protein 12 -0.065757
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0596257
RPL37A ribosomal protein L37a -0.049532
APOA2 apolipoprotein A-II -0.0480782
RPLP1 ribosomal protein, large, P1 -0.0475072
RPS8 ribosomal protein S8 -0.0473793
TMSB10 thymosin beta 10 -0.046156
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0428247
RPL35A ribosomal protein L35a -0.0404128
RPL31 ribosomal protein L31 -0.0403034
RPL34 ribosomal protein L34 -0.0393064
RPL26 ribosomal protein L26 -0.0392158
CP ceruloplasmin (ferroxidase) -0.0387289
MARCKS myristoylated alanine-rich protein kinase C substrate -0.037145
FTL ferritin, light polypeptide -0.036441
GPC6 glypican 6 -0.0349069
RPS19 ribosomal protein S19 -0.0336411
GNAS GNAS complex locus -0.0324056
AHSG alpha-2-HS-glycoprotein -0.0315611
APOA1 apolipoprotein A-I -0.0306361
AMBP alpha-1-microglobulin/bikunin precursor -0.0306056
RPL9 ribosomal protein L9 -0.0304553
RPL12 ribosomal protein L12 -0.0303884
RPS24 ribosomal protein S24 -0.0283634
RPLP0 ribosomal protein, large, P0 -0.0283034
RPS12 ribosomal protein S12 -0.0278441
GMDS GDP-mannose 4,6-dehydratase -0.0275285
APOE apolipoprotein E -0.0269031
RPLP2 ribosomal protein, large, P2 -0.0264385
ZBTB20 zinc finger and BTB domain containing 20 -0.0258589
RPS14 ribosomal protein S14 -0.0257359
RPL36 ribosomal protein L36 -0.0255428
EHBP1 EH domain binding protein 1 -0.0248661
EIF5B eukaryotic translation initiation factor 5B -0.0242566
RPS21 ribosomal protein S21 -0.0238481
RPS27A ribosomal protein S27a -0.0229301
IER3 immediate early response 3 -0.0225127
EML4 echinoderm microtubule associated protein like 4 -0.0218659
RPS29 ribosomal protein S29 -0.0213783
PLIN2 perilipin 2 -0.0209522
RPL11 ribosomal protein L11 -0.0208961
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.02059
RPS3 ribosomal protein S3 -0.0204752
FBF1 Fas (TNFRSF6) binding factor 1 -0.0192902
FRMD5 FERM domain containing 5 -0.0192198
RPL32 ribosomal protein L32 -0.0191679
S100A9 S100 calcium binding protein A9 -0.0189065
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0187702
NDRG1 N-myc downstream regulated 1 -0.0187052
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0185139
TM4SF1 transmembrane 4 L six family member 1 -0.018491
RPS16 ribosomal protein S16 -0.018418
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.018383
CST3 cystatin C -0.0181118
RPS25 ribosomal protein S25 -0.0180386
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0177713
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0175579
HMGA1 high mobility group AT-hook 1 -0.0172425
PFN1 profilin 1 -0.0170441
ISG15 ISG15 ubiquitin-like modifier -0.017023
P4HB prolyl 4-hydroxylase, beta polypeptide -0.01702
RPL23 ribosomal protein L23 -0.0169588
SOX5 SRY (sex determining region Y)-box 5 -0.0165008
RPS5 ribosomal protein S5 -0.0163573
GPC3 glypican 3 -0.0162057
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0161839
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0160198
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0158356
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0156886
IFITM3 interferon induced transmembrane protein 3 -0.0156659
ETFB electron-transfer-flavoprotein, beta polypeptide -0.0156439
RPS10 ribosomal protein S10 -0.0155818
IGFBP1 insulin-like growth factor binding protein 1 -0.0155143
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0150157
APOH apolipoprotein H (beta-2-glycoprotein I) -0.0149354
STAT1 signal transducer and activator of transcription 1, 91kDa -0.014853
RPS27 ribosomal protein S27 -0.0147667
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0146827
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0145094
TBC1D5 TBC1 domain family, member 5 -0.0144153
MAML2 mastermind-like 2 (Drosophila) -0.0144051
ITGA1 integrin, alpha 1 -0.0144003
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0143939
AGXT alanine-glyoxylate aminotransferase -0.0143682
ACTG1 actin gamma 1 -0.0142923
RPL35 ribosomal protein L35 -0.0141218
FAM162A family with sequence similarity 162, member A -0.0140847
SLC38A1 solute carrier family 38, member 1 -0.0140191
RPS23 ribosomal protein S23 -0.0139646
RPL27 ribosomal protein L27 -0.0138396
GCC2 GRIP and coiled-coil domain containing 2 -0.0138286
PTMA prothymosin, alpha -0.013791
HMGA2 high mobility group AT-hook 2 -0.013712
RPS17 ribosomal protein S17 -0.0136778
NHSL1 NHS-like 1 -0.0135607