Imiquimod (maleate)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Imiquimod (maleate) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Imiquimod (maleate)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RNF145 ring finger protein 145 0.0969122
FAM13A family with sequence similarity 13, member A 0.0738168
EREG epiregulin 0.0671571
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0639844
ERRFI1 ERBB receptor feedback inhibitor 1 0.0595584
RAB1A RAB1A, member RAS oncogene family 0.0539836
TXNIP thioredoxin interacting protein 0.0520285
UBA6 ubiquitin-like modifier activating enzyme 6 0.0504242
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.049848
MED13L mediator complex subunit 13-like 0.0486021
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.046772
ZNF292 zinc finger protein 292 0.0462646
COPA coatomer protein complex, subunit alpha 0.0453647
WAC WW domain containing adaptor with coiled-coil 0.0432335
TFG TRK-fused gene 0.0392253
ESYT2 extended synaptotagmin-like protein 2 0.0388764
CCNY cyclin Y 0.0385489
KDM6A lysine (K)-specific demethylase 6A 0.0378216
KMT2E lysine (K)-specific methyltransferase 2E 0.0371939
NUP58 nucleoporin 58 0.0371413
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0363272
RPL21 ribosomal protein L21 0.0361679
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0353844
NDRG1 N-myc downstream regulated 1 0.0352997
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0346004
GARS1 glycyl-tRNA synthetase 1 0.0343003
SETD5 SET domain containing 5 0.0341358
GOLGA4 golgin A4 0.0337808
PUM2 pumilio RNA-binding family member 2 0.0333205
ARHGAP29 Rho GTPase activating protein 29 0.0325033
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0319169
TSC22D2 TSC22 domain family, member 2 0.0309405
FNDC3B fibronectin type III domain containing 3B 0.0309209
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0308119
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0296909
S100P S100 calcium binding protein P 0.02967
TRA2A transformer 2 alpha homolog (Drosophila) 0.0286216
RAP1B RAP1B, member of RAS oncogene family 0.0282234
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0281046
USP3 ubiquitin specific peptidase 3 0.0279944
RAB6A RAB6A, member RAS oncogene family 0.0276544
CCNL1 cyclin L1 0.0275276
HELZ helicase with zinc finger 0.0274729
H2AC6 H2A clustered histone 6 0.0274575
VEGFA vascular endothelial growth factor A 0.0257464
NAMPT nicotinamide phosphoribosyltransferase 0.0255771
SEC31A SEC31 homolog A (S. cerevisiae) 0.0255641
CHD1 chromodomain helicase DNA binding protein 1 0.0253213
FXR1 fragile X mental retardation, autosomal homolog 1 0.0252884
CDC73 cell division cycle 73 0.0252715
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.024766
ETNK1 ethanolamine kinase 1 0.0246502
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0246373
FTH1 ferritin, heavy polypeptide 1 0.0245405
BCLAF1 BCL2-associated transcription factor 1 0.0245271
SUCO SUN domain containing ossification factor 0.024389
NCKAP1 NCK-associated protein 1 0.0237865
RREB1 ras responsive element binding protein 1 0.0237262
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0235279
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0234546
SLMAP sarcolemma associated protein 0.0233804
CD46 CD46 molecule, complement regulatory protein 0.0231345
SRP54 signal recognition particle 54kDa 0.022858
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0226714
MXI1 MAX interactor 1, dimerization protein 0.0226486
SEC24D SEC24 family member D 0.0226381
RPL3 ribosomal protein L3 0.0218649
KRT18 keratin 18, type I 0.0218513
DDIT4 DNA-damage-inducible transcript 4 0.0217782
EPS8 epidermal growth factor receptor pathway substrate 8 0.021766
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0216431
KDM5B lysine (K)-specific demethylase 5B 0.0216184
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0214342
SPPL3 signal peptide peptidase like 3 0.0212869
KCMF1 potassium channel modulatory factor 1 0.0212824
WDR45B WD repeat domain 45B 0.0210718
RLF rearranged L-myc fusion 0.0208426
PNISR PNN-interacting serine/arginine-rich protein 0.0207611
HACD2 3-hydroxyacyl-CoA dehydratase 2 0.0204526
ZFAND3 zinc finger, AN1-type domain 3 0.0203542
PRRC1 proline-rich coiled-coil 1 0.0203355
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.020306
UGCG UDP-glucose ceramide glucosyltransferase 0.0200441
LMAN1 lectin, mannose-binding, 1 0.0199644
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0199263
YBX1 Y box binding protein 1 0.0197143
BHLHE40 basic helix-loop-helix family, member e40 0.0196449
PUM1 pumilio RNA-binding family member 1 0.0196074
DERA deoxyribose-phosphate aldolase (putative) 0.019591
RNMT RNA (guanine-7-) methyltransferase 0.0194618
LRRC1 leucine rich repeat containing 1 0.0193791
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0191296
MXD1 MAX dimerization protein 1 0.0187916
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0186302
STRN3 striatin, calmodulin binding protein 3 0.0184117
CDC42SE2 CDC42 small effector 2 0.0182893
PICALM phosphatidylinositol binding clathrin assembly protein 0.0181592
TPD52 tumor protein D52 0.0181209
ADAM9 ADAM metallopeptidase domain 9 0.018118
ADAM17 ADAM metallopeptidase domain 17 0.0181151

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.226533
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.178013
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.168483
AHNAK AHNAK nucleoprotein -0.106564
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.105336
EEF2 eukaryotic translation elongation factor 2 -0.0969874
TPT1 tumor protein, translationally-controlled 1 -0.0943079
CEMIP cell migration inducing protein, hyaluronan binding -0.0899758
FAT1 FAT atypical cadherin 1 -0.0869643
ALCAM activated leukocyte cell adhesion molecule -0.0817152
RPS27A ribosomal protein S27a -0.0792736
MYO1E myosin IE -0.0789452
TMSB10 thymosin beta 10 -0.0777066
NPSR1 neuropeptide S receptor 1 -0.0717208
UBC ubiquitin C -0.0712717
NALF1 NALCN channel auxiliary factor 1 -0.070139
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0695205
ONECUT3 one cut homeobox 3 -0.0687345
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.059754
ITGA6 integrin, alpha 6 -0.0561804
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0555893
CANX calnexin -0.0552602
GMDS GDP-mannose 4,6-dehydratase -0.0552033
ACTG1 actin gamma 1 -0.0536567
TPM4 tropomyosin 4 -0.0533523
RPL23 ribosomal protein L23 -0.0524992
PKM pyruvate kinase, muscle -0.0510906
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0501408
PTPRK protein tyrosine phosphatase, receptor type, K -0.0499617
PDE4D phosphodiesterase 4D, cAMP-specific -0.0482637
ANTXR2 anthrax toxin receptor 2 -0.0477251
ASPH aspartate beta-hydroxylase -0.0475258
S100A6 S100 calcium binding protein A6 -0.0472158
LOC112694756 uncharaterized LOC112694756 -0.0463688
ENO1 enolase 1, (alpha) -0.0457908
JUN jun proto-oncogene -0.044201
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0418839
EPCAM epithelial cell adhesion molecule -0.0417261
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0415467
LOC102724023 ES1 protein homolog, mitochondrial -0.0408826
FHIT fragile histidine triad -0.0407415
EZR ezrin -0.040687
EXT1 exostosin glycosyltransferase 1 -0.0403018
ZBTB20 zinc finger and BTB domain containing 20 -0.0401544
CD44 CD44 molecule (Indian blood group) -0.0388358
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0386676
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0382873
SMYD3 SET and MYND domain containing 3 -0.0377982
GCC2 GRIP and coiled-coil domain containing 2 -0.0354288
APP amyloid beta (A4) precursor protein -0.0350279
RPL35A ribosomal protein L35a -0.0350013
KLF5 Kruppel-like factor 5 (intestinal) -0.034956
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0345532
RPLP1 ribosomal protein, large, P1 -0.0344673
SOX4 SRY (sex determining region Y)-box 4 -0.0341869
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0339393
PATJ PATJ crumbs cell polarity complex component -0.033842
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0338279
CCSER1 coiled-coil serine-rich protein 1 -0.0337457
PCBP2 poly(rC) binding protein 2 -0.033629
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0335738
PDIA3 protein disulfide isomerase family A, member 3 -0.0331945
DIAPH2 diaphanous-related formin 2 -0.0331071
CALR calreticulin -0.0329474
EPHB2 EPH receptor B2 -0.0329262
CCND1 cyclin D1 -0.0329143
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0326404
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0325751
ZFP36L2 ZFP36 ring finger protein-like 2 -0.0322474
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0320345
TRAPPC9 trafficking protein particle complex 9 -0.0318272
FOXP1 forkhead box P1 -0.031203
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0311153
FAF1 Fas (TNFRSF6) associated factor 1 -0.0305312
MT2A metallothionein 2A -0.0303695
PDIA4 protein disulfide isomerase family A, member 4 -0.0303516
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0303042
BPTF bromodomain PHD finger transcription factor -0.0302711
SOX9 SRY (sex determining region Y)-box 9 -0.0301501
RPS6 ribosomal protein S6 -0.0297177
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0296955
TSC22D1 TSC22 domain family, member 1 -0.029646
PARD3B par-3 family cell polarity regulator beta -0.0295634
PIGR polymeric immunoglobulin receptor -0.0295132
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.029256
LMNA lamin A/C -0.0291867
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0286767
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0282118
BTG1 B-cell translocation gene 1, anti-proliferative -0.0276244
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0271726
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0269175
FRMD5 FERM domain containing 5 -0.0269093
POTEF POTE ankyrin domain family, member F -0.026791
KIF5B kinesin family member 5B -0.0266533
ACTN4 actinin, alpha 4 -0.0263954
RPL34 ribosomal protein L34 -0.0263794
MAML3 mastermind-like 3 (Drosophila) -0.0263183
RNF213 ring finger protein 213 -0.0262983
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0262942
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0260319