Imiquimod (maleate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Imiquimod (maleate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Imiquimod (maleate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DLC1 DLC1 Rho GTPase activating protein 0.15795
LPP LIM domain containing preferred translocation partner in lipoma 0.0888033
ZNF292 zinc finger protein 292 0.0865687
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0859598
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0837533
TRIO trio Rho guanine nucleotide exchange factor 0.081937
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0810026
ELL2 elongation factor, RNA polymerase II, 2 0.0756487
FNDC3B fibronectin type III domain containing 3B 0.0703295
SBF2 SET binding factor 2 0.0675995
LAMB3 laminin, beta 3 0.0675953
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0670873
OSBPL8 oxysterol binding protein-like 8 0.0656249
FMNL2 formin-like 2 0.0640546
FLNB filamin B, beta 0.0640059
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0637066
PBX3 pre-B-cell leukemia homeobox 3 0.0624405
RPL4 ribosomal protein L4 0.0621254
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0612729
PARD3 par-3 family cell polarity regulator 0.0597704
NAP1L1 nucleosome assembly protein 1-like 1 0.0572256
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.054721
KMT2E lysine (K)-specific methyltransferase 2E 0.0535425
FHIT fragile histidine triad 0.0534813
TTR transthyretin 0.0532949
BIRC6 baculoviral IAP repeat containing 6 0.0507919
CALD1 caldesmon 1 0.0503674
WAC WW domain containing adaptor with coiled-coil 0.0498523
BNC2 basonuclin 2 0.0495279
EXOC4 exocyst complex component 4 0.0492943
LCORL ligand dependent nuclear receptor corepressor-like 0.0481939
RAD51B RAD51 paralog B 0.0480729
USP3 ubiquitin specific peptidase 3 0.0479326
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0468968
FRMD4A FERM domain containing 4A 0.0463966
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0459648
ZCCHC7 zinc finger, CCHC domain containing 7 0.0453634
ZMYM2 zinc finger, MYM-type 2 0.0446563
SETD5 SET domain containing 5 0.0443392
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0426983
RASA2 RAS p21 protein activator 2 0.0420278
COG5 component of oligomeric golgi complex 5 0.0416923
PTK2 protein tyrosine kinase 2 0.0416698
TSC22D2 TSC22 domain family, member 2 0.0404402
APP amyloid beta (A4) precursor protein 0.0398131
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0397236
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0396736
DENND1A DENN/MADD domain containing 1A 0.0377464
KDM3A lysine (K)-specific demethylase 3A 0.0368068
CALR calreticulin 0.0367359
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.036654
ATP13A3 ATPase type 13A3 0.0365937
PTBP2 polypyrimidine tract binding protein 2 0.0363817
ADAM9 ADAM metallopeptidase domain 9 0.0360347
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0359772
CD2AP CD2-associated protein 0.0358165
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0357044
PGK1 phosphoglycerate kinase 1 0.0354157
POU2F1 POU class 2 homeobox 1 0.0348935
SRPK2 SRSF protein kinase 2 0.0346389
NAMPT nicotinamide phosphoribosyltransferase 0.0345204
ANO6 anoctamin 6 0.0340484
STRN3 striatin, calmodulin binding protein 3 0.0337638
DGKI diacylglycerol kinase, iota 0.0335942
NF1 neurofibromin 1 0.0332207
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0328738
PAWR PRKC, apoptosis, WT1, regulator 0.0327475
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0322751
BRWD3 bromodomain and WD repeat domain containing 3 0.0319606
TPD52 tumor protein D52 0.0318947
CORO1C coronin, actin binding protein, 1C 0.0315058
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 0.0314088
FOXO3 forkhead box O3 0.0311621
SMYD3 SET and MYND domain containing 3 0.0310166
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0305406
KDM6A lysine (K)-specific demethylase 6A 0.0302206
ITCH itchy E3 ubiquitin protein ligase 0.0301996
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0301661
NUP58 nucleoporin 58 0.0301035
FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 0.0300706
FNIP1 folliculin interacting protein 1 0.0300475
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0299424
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0299257
RPL3 ribosomal protein L3 0.0298832
OGA O-GlcNAcase 0.0295433
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0295016
WDR43 WD repeat domain 43 0.0294544
EIF4B eukaryotic translation initiation factor 4B 0.029301
VCL vinculin 0.02904
ECT2 epithelial cell transforming 2 0.0290063
CDC73 cell division cycle 73 0.0286951
BRWD1 bromodomain and WD repeat domain containing 1 0.0286082
LDHA lactate dehydrogenase A 0.0286041
XPO1 exportin 1 0.0285803
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0285272
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0283287
RNMT RNA (guanine-7-) methyltransferase 0.0281655
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0281092
DLG1 discs, large homolog 1 (Drosophila) 0.0280722
MXI1 MAX interactor 1, dimerization protein 0.0280106

decreased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 -0.140519
MT2A metallothionein 2A -0.0936382
EXT1 exostosin glycosyltransferase 1 -0.0703828
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0670821
POTEF POTE ankyrin domain family, member F -0.0589224
RPS6 ribosomal protein S6 -0.0568144
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0505621
RPS2 ribosomal protein S2 -0.0479053
RPL35A ribosomal protein L35a -0.0469206
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0402549
RPL9 ribosomal protein L9 -0.0401895
RPL7 ribosomal protein L7 -0.0385279
TXNRD1 thioredoxin reductase 1 -0.0384951
RPL23 ribosomal protein L23 -0.0378607
SPRY4 sprouty homolog 4 (Drosophila) -0.0378546
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0351493
IFI16 interferon, gamma-inducible protein 16 -0.0347877
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0338333
SGMS2 sphingomyelin synthase 2 -0.0330686
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.032816
EGR1 early growth response 1 -0.0321359
RECQL RecQ helicase-like -0.0302499
NABP1 nucleic acid binding protein 1 -0.0299524
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0298022
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0290519
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0289187
LOC112694756 uncharaterized LOC112694756 -0.0284293
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0279713
EIF1 eukaryotic translation initiation factor 1 -0.0279505
MCL1 myeloid cell leukemia 1 -0.0273972
RPL38 ribosomal protein L38 -0.0266677
ARHGAP22 Rho GTPase activating protein 22 -0.0263026
RPL26 ribosomal protein L26 -0.0262415
SP100 SP100 nuclear antigen -0.0257362
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0257073
TASOR2 transcription activation suppressor family member 2 -0.0256566
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 -0.025501
RPLP1 ribosomal protein, large, P1 -0.0253401
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0250829
EEA1 early endosome antigen 1 -0.0250201
TM4SF1 transmembrane 4 L six family member 1 -0.024884
SAMD9 sterile alpha motif domain containing 9 -0.0245867
RPS20 ribosomal protein S20 -0.0240712
DENND4A DENN/MADD domain containing 4A -0.0233564
RPL34 ribosomal protein L34 -0.0232517
TUBB4B tubulin, beta 4B class IVb -0.0226155
MYO9B myosin IXB -0.0223582
RPL36 ribosomal protein L36 -0.0223529
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0222963
PTMA prothymosin, alpha -0.0220828
SHANK1 SH3 and multiple ankyrin repeat domains 1 -0.0218113
CASP4 caspase 4, apoptosis-related cysteine peptidase -0.0218024
SCLT1 sodium channel and clathrin linker 1 -0.0216209
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0211503
RBM25 RNA binding motif protein 25 -0.0210528
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0209493
ZNF706 zinc finger protein 706 -0.0207204
TUT7 terminal uridylyl transferase 7 -0.0204824
ARL15 ADP-ribosylation factor-like 15 -0.0204045
S100A10 S100 calcium binding protein A10 -0.0201099
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0201022
RPS27 ribosomal protein S27 -0.0196557
ERBIN erbb2 interacting protein -0.0196172
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0195086
JUN jun proto-oncogene -0.0194455
RRBP1 ribosome binding protein 1 -0.0189945
S100A9 S100 calcium binding protein A9 -0.0189877
EFNB2 ephrin-B2 -0.018879
RPL32 ribosomal protein L32 -0.0188343
SPIDR scaffolding protein involved in DNA repair -0.0184703
ALCAM activated leukocyte cell adhesion molecule -0.0184141
PLAUR plasminogen activator, urokinase receptor -0.0182166
UPP1 uridine phosphorylase 1 -0.0182094
GLIPR1 GLI pathogenesis-related 1 -0.0181908
CENPF centromere protein F, 350/400kDa -0.0181297
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.0180202
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0178171
RPS29 ribosomal protein S29 -0.0175992
IFI6 interferon, alpha-inducible protein 6 -0.0175429
ATF4 activating transcription factor 4 -0.01751
MYO9A myosin IXA -0.0174805
CDCP1 CUB domain containing protein 1 -0.0174371
GPATCH2L G patch domain containing 2-like -0.0171834
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0171693
ARHGAP31 Rho GTPase activating protein 31 -0.0171445
FBXL17 F-box and leucine-rich repeat protein 17 -0.0170595
HLA-C major histocompatibility complex, class I, C -0.0168194
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0167576
RPL12 ribosomal protein L12 -0.0165406
PHF20L1 PHD finger protein 20-like 1 -0.0165244
WNT2B wingless-type MMTV integration site family, member 2B -0.0164651
RPL8 ribosomal protein L8 -0.0164019
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0163243
PNPLA8 patatin-like phospholipase domain containing 8 -0.0162939
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0161887
TPX2 TPX2, microtubule-associated -0.0161345
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0160706
RPS24 ribosomal protein S24 -0.0159169
SKI SKI proto-oncogene -0.0158691
AHI1 Abelson helper integration site 1 -0.0157928