Imiquimod (maleate)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Imiquimod (maleate) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Imiquimod (maleate)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.151169
ZNF292 zinc finger protein 292 0.122979
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.11642
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.113168
GOLGA4 golgin A4 0.0990187
NAMPT nicotinamide phosphoribosyltransferase 0.0906242
KMT2E lysine (K)-specific methyltransferase 2E 0.0808401
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0777411
QKI QKI, KH domain containing, RNA binding 0.0681856
TXNIP thioredoxin interacting protein 0.059348
TFG TRK-fused gene 0.0544831
UBA6 ubiquitin-like modifier activating enzyme 6 0.0544623
RBM39 RNA binding motif protein 39 0.054208
WAC WW domain containing adaptor with coiled-coil 0.0528465
RPL13A ribosomal protein L13a 0.0523937
RNF145 ring finger protein 145 0.049786
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0482592
CCNL1 cyclin L1 0.0479814
RPS3 ribosomal protein S3 0.0460926
PFN1 profilin 1 0.0457344
RPS19 ribosomal protein S19 0.0452264
KDM6A lysine (K)-specific demethylase 6A 0.0450744
ELOVL5 ELOVL fatty acid elongase 5 0.0440116
ECT2 epithelial cell transforming 2 0.0439913
RPL21 ribosomal protein L21 0.0435389
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0433552
DSTN destrin (actin depolymerizing factor) 0.0432625
GARS1 glycyl-tRNA synthetase 1 0.0422821
SSBP2 single-stranded DNA binding protein 2 0.0422408
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.042137
RPL3 ribosomal protein L3 0.0410807
PUM2 pumilio RNA-binding family member 2 0.0404836
MT2A metallothionein 2A 0.0394255
PRRC2C proline-rich coiled-coil 2C 0.0390479
RPL4 ribosomal protein L4 0.0388141
RAB1A RAB1A, member RAS oncogene family 0.0385039
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0384758
NUP58 nucleoporin 58 0.0378991
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0378962
RNMT RNA (guanine-7-) methyltransferase 0.0376873
PNISR PNN-interacting serine/arginine-rich protein 0.0373056
NBAS neuroblastoma amplified sequence 0.036348
RPL19 ribosomal protein L19 0.0359015
JMJD1C jumonji domain containing 1C 0.0356698
CDC73 cell division cycle 73 0.0354817
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0354787
SLMAP sarcolemma associated protein 0.0349217
COG5 component of oligomeric golgi complex 5 0.0344892
FTL ferritin, light polypeptide 0.0344455
RPLP0 ribosomal protein, large, P0 0.0342172
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0340725
MORF4L2 mortality factor 4 like 2 0.0340086
HELZ helicase with zinc finger 0.0340027
SETD5 SET domain containing 5 0.033786
ATOSA atos homolog A 0.0334765
PGK1 phosphoglycerate kinase 1 0.0325591
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0322346
COPA coatomer protein complex, subunit alpha 0.0318254
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0315162
COPB1 coatomer protein complex, subunit beta 1 0.031459
PTK2 protein tyrosine kinase 2 0.031084
SRP54 signal recognition particle 54kDa 0.0310602
PTBP2 polypyrimidine tract binding protein 2 0.0308876
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0308608
TRA2A transformer 2 alpha homolog (Drosophila) 0.0304795
DENND4A DENN/MADD domain containing 4A 0.0304612
RPS29 ribosomal protein S29 0.0301604
RPL27A ribosomal protein L27a 0.0299123
EPS8 epidermal growth factor receptor pathway substrate 8 0.0297611
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0297303
RTN4 reticulon 4 0.0296054
RPLP2 ribosomal protein, large, P2 0.0295949
RPS8 ribosomal protein S8 0.0291323
RAB6A RAB6A, member RAS oncogene family 0.0289357
CHD1 chromodomain helicase DNA binding protein 1 0.028704
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0286516
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0284151
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0283744
FNDC3B fibronectin type III domain containing 3B 0.0283531
RPS2 ribosomal protein S2 0.0282805
USP3 ubiquitin specific peptidase 3 0.0281448
RPL7A ribosomal protein L7a 0.0280783
RPL32 ribosomal protein L32 0.0278506
RBM25 RNA binding motif protein 25 0.0274028
ZCCHC7 zinc finger, CCHC domain containing 7 0.0272109
ASXL1 additional sex combs like transcriptional regulator 1 0.0270444
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0269847
SUCO SUN domain containing ossification factor 0.0268029
TMEM41B transmembrane protein 41B 0.0265424
B2M beta-2-microglobulin 0.0264459
YBX1 Y box binding protein 1 0.0263434
SMC3 structural maintenance of chromosomes 3 0.0262315
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0262076
RSRC2 arginine/serine-rich coiled-coil 2 0.0260963
BCLAF1 BCL2-associated transcription factor 1 0.0259974
SREBF2 sterol regulatory element binding transcription factor 2 0.025904
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0258436
SEC31A SEC31 homolog A (S. cerevisiae) 0.025768
OGA O-GlcNAcase 0.0257526
RPL11 ribosomal protein L11 0.0257159

decreased expression

Symbol Name Standardized Value
AHNAK AHNAK nucleoprotein -0.249539
PDE4D phosphodiesterase 4D, cAMP-specific -0.240175
PKM pyruvate kinase, muscle -0.129905
BMP10 bone morphogenetic protein 10 -0.127367
VCL vinculin -0.111592
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.103394
EGFR epidermal growth factor receptor -0.0896175
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0893853
FOXP1 forkhead box P1 -0.0841385
EEF2 eukaryotic translation elongation factor 2 -0.0773704
UBC ubiquitin C -0.0736949
NBEA neurobeachin -0.0702213
GLI3 GLI family zinc finger 3 -0.0677091
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0658208
ARL4C ADP-ribosylation factor-like 4C -0.0598384
GLI2 GLI family zinc finger 2 -0.0583779
IFI16 interferon, gamma-inducible protein 16 -0.058165
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0552382
CCND1 cyclin D1 -0.0543411
FLNB filamin B, beta -0.0535578
TXNRD1 thioredoxin reductase 1 -0.0534104
ZMYND8 zinc finger, MYND-type containing 8 -0.0526075
GSE1 Gse1 coiled-coil protein -0.0453798
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0418028
MYO5C myosin VC -0.0414946
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0405049
SLC38A2 solute carrier family 38, member 2 -0.040246
PDE4B phosphodiesterase 4B, cAMP-specific -0.0392116
PYGB phosphorylase, glycogen; brain -0.0391113
NFE2L2 nuclear factor, erythroid 2-like 2 -0.037994
HEG1 heart development protein with EGF-like domains 1 -0.0376719
PIWIL1 piwi-like RNA-mediated gene silencing 1 -0.03721
EXOC6B exocyst complex component 6B -0.0371127
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0366698
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0360165
TAS2R14 taste receptor, type 2, member 14 -0.0352763
ATP9B ATPase, class II, type 9B -0.034823
PTMA prothymosin, alpha -0.0348147
ADAM10 ADAM metallopeptidase domain 10 -0.034652
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0341461
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0333173
RPL23 ribosomal protein L23 -0.0333034
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0326682
ENO1 enolase 1, (alpha) -0.0325551
RPS27A ribosomal protein S27a -0.0321777
NPAS2 neuronal PAS domain protein 2 -0.0320725
BPTF bromodomain PHD finger transcription factor -0.0316697
ZNF438 zinc finger protein 438 -0.0309014
TSC22D1 TSC22 domain family, member 1 -0.0300327
DOCK1 dedicator of cytokinesis 1 -0.0299152
AMOTL2 angiomotin like 2 -0.0298611
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0296992
CUX1 cut-like homeobox 1 -0.029672
POTEF POTE ankyrin domain family, member F -0.029579
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0295191
S100A4 S100 calcium binding protein A4 -0.0279667
SPRY4 sprouty homolog 4 (Drosophila) -0.0278099
EZR ezrin -0.0274754
TTC28 tetratricopeptide repeat domain 28 -0.0272174
SMYD3 SET and MYND domain containing 3 -0.0271357
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0271268
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0267738
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0265058
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0262903
SDK1 sidekick cell adhesion molecule 1 -0.0258306
RPL35A ribosomal protein L35a -0.0258298
SFPQ splicing factor proline/glutamine-rich -0.0256855
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0255917
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0253965
SP100 SP100 nuclear antigen -0.0253273
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0250385
FUS FUS RNA binding protein -0.0245067
PDE7B phosphodiesterase 7B -0.0243909
PRUNE2 prune homolog 2 (Drosophila) -0.0243143
R3HDM2 R3H domain containing 2 -0.0242756
ONECUT2 one cut homeobox 2 -0.0242447
KLF3 Kruppel-like factor 3 (basic) -0.0241868
AEBP2 AE binding protein 2 -0.0241519
ERCC6L2 excision repair cross-complementation group 6-like 2 -0.0240294
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.023874
APP amyloid beta (A4) precursor protein -0.0238398
COMMD10 COMM domain containing 10 -0.0237584
BICD1 bicaudal D homolog 1 (Drosophila) -0.0234455
GPATCH2L G patch domain containing 2-like -0.0234193
XKR6 XK, Kell blood group complex subunit-related family, member 6 -0.023351
SOX6 SRY (sex determining region Y)-box 6 -0.0229621
PRELID2 PRELI domain containing 2 -0.0228366
ZNF608 zinc finger protein 608 -0.022589
PCBP2 poly(rC) binding protein 2 -0.0225561
LOXL3 lysyl oxidase-like 3 -0.0225494
MACROD2 MACRO domain containing 2 -0.0223361
SPIDR scaffolding protein involved in DNA repair -0.022212
PRH1 proline-rich protein HaeIII subfamily 1 -0.0221019
DIAPH2 diaphanous-related formin 2 -0.0218114
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0218025
DIAPH3 diaphanous-related formin 3 -0.0218022
PARD3B par-3 family cell polarity regulator beta -0.0216492
NT5C2 5'-nucleotidase, cytosolic II -0.0211426
HDAC9 histone deacetylase 9 -0.0210501
NAV2 neuron navigator 2 -0.0207511