Irinotecan (hydrochloride)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAM13A family with sequence similarity 13, member A 0.152743
HELZ helicase with zinc finger 0.124145
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.102827
PRRC2C proline-rich coiled-coil 2C 0.0789233
MSI2 musashi RNA-binding protein 2 0.0760542
ZMIZ1 zinc finger, MIZ-type containing 1 0.0750145
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0733666
SRRM2 serine/arginine repetitive matrix 2 0.0723901
RPS6 ribosomal protein S6 0.0719905
PTK2 protein tyrosine kinase 2 0.0699275
SETD5 SET domain containing 5 0.0697746
PKM pyruvate kinase, muscle 0.0676003
WAC WW domain containing adaptor with coiled-coil 0.0674025
MYH9 myosin, heavy chain 9, non-muscle 0.0660112
ZNF292 zinc finger protein 292 0.0652353
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0646096
RPL23 ribosomal protein L23 0.0639863
SEPTIN9 septin 9 0.0638767
HSPA8 heat shock 70kDa protein 8 0.0637025
PCBP2 poly(rC) binding protein 2 0.0612192
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0594855
WDR43 WD repeat domain 43 0.0580077
ENAH enabled homolog (Drosophila) 0.0577782
PTMA prothymosin, alpha 0.0572849
ZFAND3 zinc finger, AN1-type domain 3 0.0570599
FNDC3B fibronectin type III domain containing 3B 0.0565548
MEIS2 Meis homeobox 2 0.0561548
CCNY cyclin Y 0.0548207
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0547612
RNF145 ring finger protein 145 0.0543763
MEF2A myocyte enhancer factor 2A 0.0536605
EIF1 eukaryotic translation initiation factor 1 0.0522283
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0521134
LPIN1 lipin 1 0.0506644
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0496977
PICALM phosphatidylinositol binding clathrin assembly protein 0.0489918
COL1A1 collagen, type I, alpha 1 0.0489879
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0487623
RPS12 ribosomal protein S12 0.0486415
NDRG1 N-myc downstream regulated 1 0.0485628
QKI QKI, KH domain containing, RNA binding 0.0478234
RPL37A ribosomal protein L37a 0.047597
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0465904
TLK2 tousled-like kinase 2 0.0465142
XPO1 exportin 1 0.0460161
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0459875
MED13 mediator complex subunit 13 0.0454352
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0452863
MARCHF6 membrane associated ring-CH-type finger 6 0.0452458
ZNF148 zinc finger protein 148 0.0448543
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0448137
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0445069
KCTD3 potassium channel tetramerization domain containing 3 0.0437512
NFE2L1 nuclear factor, erythroid 2-like 1 0.0434031
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.043199
DSCAM Down syndrome cell adhesion molecule 0.0426923
BBX bobby sox homolog (Drosophila) 0.0426702
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0426565
RPL19 ribosomal protein L19 0.0424765
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0424313
TLE4 transducin-like enhancer of split 4 0.0419773
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0415523
VEGFA vascular endothelial growth factor A 0.0413202
CADM1 cell adhesion molecule 1 0.0412067
MED13L mediator complex subunit 13-like 0.0408156
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0402875
ANKRD11 ankyrin repeat domain 11 0.0402419
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0402285
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0402246
SSBP2 single-stranded DNA binding protein 2 0.0401253
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.039694
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0392913
CASC3 cancer susceptibility candidate 3 0.0391699
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0388846
PGK1 phosphoglycerate kinase 1 0.0388183
TENT5A terminal nucleotidyltransferase 5A 0.0386904
KDM6A lysine (K)-specific demethylase 6A 0.038613
EIF4B eukaryotic translation initiation factor 4B 0.0385283
SNX13 sorting nexin 13 0.0379541
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0378332
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0377838
KDM2A lysine (K)-specific demethylase 2A 0.0376977
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0369566
RPS3 ribosomal protein S3 0.0369534
SCAF11 SR-related CTD-associated factor 11 0.0368779
PCNX1 pecanex 1 0.0364812
SBF2 SET binding factor 2 0.0364065
YEATS2 YEATS domain containing 2 0.0363532
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0363365
KDM3A lysine (K)-specific demethylase 3A 0.0362599
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0360049
ATXN1 ataxin 1 0.0359371
BCLAF1 BCL2-associated transcription factor 1 0.0358832
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0358681
SSBP3 single stranded DNA binding protein 3 0.0357328
ACSL3 acyl-CoA synthetase long-chain family member 3 0.035335
RPTOR regulatory associated protein of MTOR, complex 1 0.0350965
PDGFRB platelet-derived growth factor receptor, beta polypeptide 0.0349286
KIRREL1 kirre like nephrin family adhesion molecule 1 0.034838
FXR1 fragile X mental retardation, autosomal homolog 1 0.0347077

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.246246
LSAMP limbic system-associated membrane protein -0.128072
FMN1 formin 1 -0.0888736
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0780629
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0733856
VCL vinculin -0.0640236
NCAM2 neural cell adhesion molecule 2 -0.0561928
NALF1 NALCN channel auxiliary factor 1 -0.0559687
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0545871
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0540772
COL3A1 collagen, type III, alpha 1 -0.0532234
SOS1 son of sevenless homolog 1 (Drosophila) -0.0515057
SYT1 synaptotagmin I -0.0456302
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0447311
GPC5 glypican 5 -0.0440284
AKAP12 A kinase (PRKA) anchor protein 12 -0.0417809
PTPRD protein tyrosine phosphatase, receptor type, D -0.0412589
DNAH14 dynein, axonemal, heavy chain 14 -0.0410545
TAS2R14 taste receptor, type 2, member 14 -0.0407437
IGF2 insulin-like growth factor 2 -0.0402704
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0391555
TRIB2 tribbles pseudokinase 2 -0.0385007
COL4A2 collagen, type IV, alpha 2 -0.0362439
ZNF804A zinc finger protein 804A -0.0360441
TPST1 tyrosylprotein sulfotransferase 1 -0.0349919
PLAT plasminogen activator, tissue -0.0349519
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0343025
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0341556
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0337525
IFI16 interferon, gamma-inducible protein 16 -0.0337181
FNDC3A fibronectin type III domain containing 3A -0.0335587
THBS1 thrombospondin 1 -0.0335082
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0334968
EGFR epidermal growth factor receptor -0.032695
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0312047
NRIP1 nuclear receptor interacting protein 1 -0.0303551
RNF213 ring finger protein 213 -0.0291753
PHF3 PHD finger protein 3 -0.0291378
GNAS GNAS complex locus -0.0284257
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0281978
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0271976
CCDC47 coiled-coil domain containing 47 -0.0267609
ARHGAP5 Rho GTPase activating protein 5 -0.0267159
NREP neuronal regeneration related protein -0.0257279
RPLP0 ribosomal protein, large, P0 -0.0255003
ANGPT1 angiopoietin 1 -0.025464
ITGAV integrin, alpha V -0.0253241
CANX calnexin -0.025139
AFF3 AF4/FMR2 family, member 3 -0.0250807
NRP1 neuropilin 1 -0.0248946
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0246919
KLF6 Kruppel-like factor 6 -0.0245096
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) -0.024475
LRP1B low density lipoprotein receptor-related protein 1B -0.0240653
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0238672
EXT1 exostosin glycosyltransferase 1 -0.0236055
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 -0.023099
KLHL5 kelch-like family member 5 -0.0230363
BPTF bromodomain PHD finger transcription factor -0.0229539
IER3 immediate early response 3 -0.0228835
ITGA1 integrin, alpha 1 -0.0226319
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0225217
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0224034
ARMH4 armadillo like helical domain containing 4 -0.0221679
PLPP1 phospholipid phosphatase 1 -0.022082
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0218259
STC1 stanniocalcin 1 -0.0212619
FHIT fragile histidine triad -0.0212368
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0211342
HAS2 hyaluronan synthase 2 -0.0210998
EPAS1 endothelial PAS domain protein 1 -0.0209488
RHOBTB3 Rho-related BTB domain containing 3 -0.0208378
HAND2 heart and neural crest derivatives expressed 2 -0.0206372
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0205616
RIGI RNA sensor RIG-I -0.0205309
RPS24 ribosomal protein S24 -0.020394
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0201447
SLC38A2 solute carrier family 38, member 2 -0.0200272
LMAN1 lectin, mannose-binding, 1 -0.019952
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0199032
ASL argininosuccinate lyase -0.0196218
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0196013
DLC1 DLC1 Rho GTPase activating protein -0.0195971
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0193256
ZFC3H1 zinc finger, C3H1-type containing -0.0191478
PTPRE protein tyrosine phosphatase, receptor type, E -0.0188991
NCOA7 nuclear receptor coactivator 7 -0.0187759
SYNJ2 synaptojanin 2 -0.0185162
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0185093
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0184588
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0183588
GLCCI1 glucocorticoid induced 1 -0.0182428
VDAC1 voltage-dependent anion channel 1 -0.018131
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.0180288
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0179925
NRG1 neuregulin 1 -0.0179688
NT5C2 5'-nucleotidase, cytosolic II -0.0178695
STK38L serine/threonine kinase 38 like -0.0178346
PELO pelota homolog (Drosophila) -0.0177752
EGR1 early growth response 1 -0.0176134