Irinotecan (hydrochloride)_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SRRM2 serine/arginine repetitive matrix 2 0.12624
BTBD9 BTB (POZ) domain containing 9 0.122722
N4BP2L2 NEDD4 binding protein 2-like 2 0.110167
MBNL2 muscleblind-like splicing regulator 2 0.0876436
SMAD3 SMAD family member 3 0.0728326
TRERF1 transcriptional regulating factor 1 0.0703167
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0683866
PADI1 peptidyl arginine deiminase, type I 0.0630806
PHF3 PHD finger protein 3 0.0627289
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0617945
MYH9 myosin, heavy chain 9, non-muscle 0.0613941
BICRAL BICRA like chromatin remodeling complex associated protein 0.0577539
VEGFA vascular endothelial growth factor A 0.0576469
EIF1 eukaryotic translation initiation factor 1 0.0554925
ATXN1 ataxin 1 0.0550266
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0540887
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0519095
SH3PXD2A SH3 and PX domains 2A 0.0517092
MLPH melanophilin 0.0507908
NCOR2 nuclear receptor corepressor 2 0.0501988
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0496827
NDRG1 N-myc downstream regulated 1 0.0494147
BCLAF1 BCL2-associated transcription factor 1 0.0490253
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0486186
SAMD4A sterile alpha motif domain containing 4A 0.047053
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0458024
AFF1 AF4/FMR2 family, member 1 0.0456361
KDM4C lysine (K)-specific demethylase 4C 0.0456293
MCTP2 multiple C2 domains, transmembrane 2 0.0451182
APLP2 amyloid beta (A4) precursor-like protein 2 0.0446814
NEBL nebulette 0.0437635
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0433677
DSCAML1 Down syndrome cell adhesion molecule like 1 0.0432958
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0427214
SFTPA2 surfactant protein A2 0.0421192
RPS6 ribosomal protein S6 0.0418544
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.0418343
PFKP phosphofructokinase, platelet 0.0403779
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0399897
ANKRD11 ankyrin repeat domain 11 0.0397706
UBAC2 UBA domain containing 2 0.0396789
DSCAM Down syndrome cell adhesion molecule 0.0396487
OARD1 O-acyl-ADP-ribose deacylase 1 0.0396356
HELZ helicase with zinc finger 0.0395483
C6ORF132 chromosome 6 open reading frame 132 0.0393083
CMIP c-Maf inducing protein 0.0388259
EFNB2 ephrin-B2 0.0388124
MPRIP myosin phosphatase Rho interacting protein 0.038673
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0372139
TUFT1 tuftelin 1 0.0368837
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0366534
YEATS2 YEATS domain containing 2 0.0361373
KIF16B kinesin family member 16B 0.0360215
ASPH aspartate beta-hydroxylase 0.035962
AHI1 Abelson helper integration site 1 0.0349953
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0342107
RNF145 ring finger protein 145 0.0341679
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0339871
DSPP dentin sialophosphoprotein 0.0339249
SHB Src homology 2 domain containing adaptor protein B 0.0339178
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0339099
PRKCA protein kinase C, alpha 0.0337881
ESYT2 extended synaptotagmin-like protein 2 0.0332865
GNPDA1 glucosamine-6-phosphate deaminase 1 0.033139
HLA-A major histocompatibility complex, class I, A 0.0330113
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0328151
PGK1 phosphoglycerate kinase 1 0.0327153
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.032255
ARGLU1 arginine and glutamate rich 1 0.0319749
ZNF638 zinc finger protein 638 0.0319598
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0319099
RUNX1 runt-related transcription factor 1 0.031813
ZNF148 zinc finger protein 148 0.0315742
FAT1 FAT atypical cadherin 1 0.031535
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0314966
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0312709
DNM2 dynamin 2 0.0310946
ERBB3 erb-b2 receptor tyrosine kinase 3 0.0308511
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.0307705
GALK2 galactokinase 2 0.0306627
MYO10 myosin X 0.0304146
TBC1D22A TBC1 domain family, member 22A 0.0303843
RPL21 ribosomal protein L21 0.0302285
PTK2 protein tyrosine kinase 2 0.0302149
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0300904
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0300461
DOCK5 dedicator of cytokinesis 5 0.0299372
RBM26 RNA binding motif protein 26 0.0295019
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0294637
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0290829
EIF4B eukaryotic translation initiation factor 4B 0.0290689
PDIA6 protein disulfide isomerase family A, member 6 0.0290571
IGF1R insulin-like growth factor 1 receptor 0.0289858
PRRC2C proline-rich coiled-coil 2C 0.0288163
SLC22A23 solute carrier family 22, member 23 0.0287565
LRRC1 leucine rich repeat containing 1 0.0287196
HDAC4 histone deacetylase 4 0.0286012
ZMYND8 zinc finger, MYND-type containing 8 0.0284671
STK24 serine/threonine kinase 24 0.0281055
DIAPH1 diaphanous-related formin 1 0.0278986

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.129057
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.123821
EPSTI1 epithelial stromal interaction 1 (breast) -0.1189
LCN2 lipocalin 2 -0.110147
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0987424
PTMA prothymosin, alpha -0.0879407
EXT1 exostosin glycosyltransferase 1 -0.085728
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.081748
SP100 SP100 nuclear antigen -0.080802
RIGI RNA sensor RIG-I -0.0802186
VCL vinculin -0.0772161
XAF1 XIAP associated factor 1 -0.0755025
IFI6 interferon, alpha-inducible protein 6 -0.0734515
B2M beta-2-microglobulin -0.0728039
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0696748
MX2 MX dynamin-like GTPase 2 -0.0689752
LYZ lysozyme -0.0678994
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0618028
RHOBTB3 Rho-related BTB domain containing 3 -0.0605974
NCOA7 nuclear receptor coactivator 7 -0.0592498
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0590984
RNF213 ring finger protein 213 -0.0568654
EGR1 early growth response 1 -0.0567031
SPATA13 spermatogenesis associated 13 -0.053454
FTL ferritin, light polypeptide -0.053369
GMDS GDP-mannose 4,6-dehydratase -0.0532601
LOC102724023 ES1 protein homolog, mitochondrial -0.0520462
STS steroid sulfatase (microsomal), isozyme S -0.0502237
SLC38A1 solute carrier family 38, member 1 -0.0494647
RAB7A RAB7A, member RAS oncogene family -0.0488445
TPT1 tumor protein, translationally-controlled 1 -0.0482767
MT2A metallothionein 2A -0.0481015
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0469647
AREG amphiregulin -0.0453946
PLSCR1 phospholipid scramblase 1 -0.0453297
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0446769
KLF6 Kruppel-like factor 6 -0.0443883
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0443011
MUC20 mucin 20, cell surface associated -0.0420164
H1-0 H1.0 linker histone -0.0410431
HMGB1 high mobility group box 1 -0.040109
TJP1 tight junction protein 1 -0.0394464
INTS6 integrator complex subunit 6 -0.0393597
MACC1 metastasis associated in colon cancer 1 -0.0388048
IFI27 interferon, alpha-inducible protein 27 -0.0386346
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0373913
RPS24 ribosomal protein S24 -0.0368928
SAMD9 sterile alpha motif domain containing 9 -0.0362764
IFIH1 interferon induced with helicase C domain 1 -0.036182
H3-3B H3.3 histone B -0.0347941
TM4SF1 transmembrane 4 L six family member 1 -0.0346193
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0338034
EPHB2 EPH receptor B2 -0.0335005
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0329967
ARF1 ADP-ribosylation factor 1 -0.032478
IER3 immediate early response 3 -0.032333
MYO1E myosin IE -0.0322649
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0322625
VDAC1 voltage-dependent anion channel 1 -0.0318357
MORF4L2 mortality factor 4 like 2 -0.0317597
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0315521
MKI67 marker of proliferation Ki-67 -0.0310986
B3GALT5 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 -0.0300935
ERBIN erbb2 interacting protein -0.0299245
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0297494
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0293714
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0290602
MT1X metallothionein 1X -0.0283991
HLA-E major histocompatibility complex, class I, E -0.0283679
PMP22 peripheral myelin protein 22 -0.0280096
KDM3A lysine (K)-specific demethylase 3A -0.0278632
IFITM3 interferon induced transmembrane protein 3 -0.0278381
FHIT fragile histidine triad -0.0277978
ABLIM1 actin binding LIM protein 1 -0.0277178
TMEM123 transmembrane protein 123 -0.0276549
TMSB10 thymosin beta 10 -0.0276394
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0274137
RPL7L1 ribosomal protein L7-like 1 -0.0271013
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0268818
MX1 MX dynamin-like GTPase 1 -0.0268424
TMC5 transmembrane channel-like 5 -0.0267754
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0263888
GNAS GNAS complex locus -0.0262223
RAD21 RAD21 homolog (S. pombe) -0.0261507
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0260311
TMEM62 transmembrane protein 62 -0.0260124
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0257631
TRA2A transformer 2 alpha homolog (Drosophila) -0.0257145
CATSPERB catsper channel auxiliary subunit beta -0.0254837
POMP proteasome maturation protein -0.0252765
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0249643
JUN jun proto-oncogene -0.0244262
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0243697
PTBP3 polypyrimidine tract binding protein 3 -0.0243383
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0242523
GCC2 GRIP and coiled-coil domain containing 2 -0.0242045
STAU1 staufen double-stranded RNA binding protein 1 -0.0241487
BRCA2 breast cancer 2, early onset -0.0241283
RPL35A ribosomal protein L35a -0.0240211
ANXA1 annexin A1 -0.0235925