Irinotecan (hydrochloride)_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT8 keratin 8, type II 0.194781
KRT18 keratin 18, type I 0.130222
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.127346
SRRM2 serine/arginine repetitive matrix 2 0.118271
ACTG1 actin gamma 1 0.107567
RPL23 ribosomal protein L23 0.107378
PLEC plectin 0.0956941
LOC112694756 uncharaterized LOC112694756 0.0845092
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0796328
MYH9 myosin, heavy chain 9, non-muscle 0.0770354
ANKRD11 ankyrin repeat domain 11 0.0744491
ANXA11 annexin A11 0.0734692
MYH14 myosin, heavy chain 14, non-muscle 0.0730477
ATXN1 ataxin 1 0.0708929
EIF1 eukaryotic translation initiation factor 1 0.0697095
NUMA1 nuclear mitotic apparatus protein 1 0.0639374
HSPA8 heat shock 70kDa protein 8 0.0631288
ACTN4 actinin, alpha 4 0.062843
AGRN agrin 0.061833
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0613286
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0602872
SLC45A4 solute carrier family 45, member 4 0.0583905
EPS8L1 EPS8-like 1 0.058321
OGA O-GlcNAcase 0.0562539
SQSTM1 sequestosome 1 0.0558811
VEGFA vascular endothelial growth factor A 0.0553728
PTK2 protein tyrosine kinase 2 0.0552351
N4BP2L2 NEDD4 binding protein 2-like 2 0.054841
ARHGAP23 Rho GTPase activating protein 23 0.053735
AHNAK AHNAK nucleoprotein 0.0533965
RPL13A ribosomal protein L13a 0.0526748
CNOT12 CCR4-NOT transcription complex subunit 12 0.0521841
MYO18A myosin XVIIIA 0.0520685
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0520573
PDE4D phosphodiesterase 4D, cAMP-specific 0.0515973
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0511135
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0507474
HYOU1 hypoxia up-regulated 1 0.0504884
EEF2 eukaryotic translation elongation factor 2 0.0493309
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0491428
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 0.0480063
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0478632
EIF4B eukaryotic translation initiation factor 4B 0.0462081
GANAB glucosidase, alpha; neutral AB 0.0452804
RBM33 RNA binding motif protein 33 0.0446242
RPL4 ribosomal protein L4 0.0442996
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0442185
PGK1 phosphoglycerate kinase 1 0.0439644
LAMB3 laminin, beta 3 0.0439023
TUFT1 tuftelin 1 0.0418925
TNIP1 TNFAIP3 interacting protein 1 0.041273
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0411825
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0400246
NFE2L1 nuclear factor, erythroid 2-like 1 0.0399019
EIF4H eukaryotic translation initiation factor 4H 0.0393481
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0393208
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0389011
NFIA nuclear factor I/A 0.0387331
GCLC glutamate-cysteine ligase, catalytic subunit 0.0384449
GNPDA1 glucosamine-6-phosphate deaminase 1 0.038233
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0379865
TPM3 tropomyosin 3 0.0379392
NACA nascent polypeptide-associated complex alpha subunit 0.0379121
STK24 serine/threonine kinase 24 0.0377171
HDGF hepatoma-derived growth factor 0.0369209
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0368794
NCOR2 nuclear receptor corepressor 2 0.0367918
HDLBP high density lipoprotein binding protein 0.0365609
GRAMD1B GRAM domain containing 1B 0.0363678
RPL21 ribosomal protein L21 0.0358074
PTPRF protein tyrosine phosphatase, receptor type, F 0.0356157
HLA-A major histocompatibility complex, class I, A 0.0354564
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0351693
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0349039
RPL11 ribosomal protein L11 0.0346229
FLNA filamin A, alpha 0.0344479
RPS3 ribosomal protein S3 0.0343043
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0342501
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 0.0340418
PLEKHA6 pleckstrin homology domain containing, family A member 6 0.03385
RPS12 ribosomal protein S12 0.0329778
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0326064
RICTOR RPTOR independent companion of MTOR, complex 2 0.0324009
SAMD4A sterile alpha motif domain containing 4A 0.0323933
EEIG1 estrogen-induced osteoclastogenesis regulator 1 0.0319025
TNS1 tensin 1 0.0318103
PRRC2C proline-rich coiled-coil 2C 0.0317195
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0316934
C6ORF62 chromosome 6 open reading frame 62 0.0313873
BCL2L1 BCL2-like 1 0.031369
EEF1G eukaryotic translation elongation factor 1 gamma 0.0312863
IGF1R insulin-like growth factor 1 receptor 0.0312466
BLCAP bladder cancer associated protein 0.0312217
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0311836
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0311563
TNRC18 trinucleotide repeat containing 18 0.0311248
CCNY cyclin Y 0.0303014
ERBB3 erb-b2 receptor tyrosine kinase 3 0.0299174
CALR calreticulin 0.029908
BRD2 bromodomain containing 2 0.029679

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.157931
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.129289
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.101681
NDRG1 N-myc downstream regulated 1 -0.0900838
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0839755
LMO7 LIM domain 7 -0.0827233
RPS2 ribosomal protein S2 -0.079493
TMEM123 transmembrane protein 123 -0.0764879
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0759384
FTL ferritin, light polypeptide -0.0752347
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0532337
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0522834
SAMD12 sterile alpha motif domain containing 12 -0.0487268
RPS24 ribosomal protein S24 -0.0466222
RPLP1 ribosomal protein, large, P1 -0.0456765
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0436271
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.042893
PDZD8 PDZ domain containing 8 -0.0427113
RBM39 RNA binding motif protein 39 -0.0423636
KDM3A lysine (K)-specific demethylase 3A -0.0418498
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0413201
WWC1 WW and C2 domain containing 1 -0.0409782
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0408443
RPL7 ribosomal protein L7 -0.0408345
IPO7 importin 7 -0.0370058
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0367243
PRKN parkin RBR E3 ubiquitin protein ligase -0.036437
ZNF207 zinc finger protein 207 -0.0363742
KRT20 keratin 20, type I -0.0355732
TPT1 tumor protein, translationally-controlled 1 -0.0354441
LIMA1 LIM domain and actin binding 1 -0.0353774
FRY furry homolog (Drosophila) -0.0353184
S100A10 S100 calcium binding protein A10 -0.0347664
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0342252
CLTC clathrin, heavy chain (Hc) -0.0336606
CD2AP CD2-associated protein -0.0334377
STAU1 staufen double-stranded RNA binding protein 1 -0.0332353
MORF4L2 mortality factor 4 like 2 -0.0316559
CANX calnexin -0.031404
ARHGAP5 Rho GTPase activating protein 5 -0.0309947
SEC31A SEC31 homolog A (S. cerevisiae) -0.030293
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0299187
GOLGA4 golgin A4 -0.0298206
AGR2 anterior gradient 2 -0.0291899
CCSER1 coiled-coil serine-rich protein 1 -0.0286777
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0282466
NAMPT nicotinamide phosphoribosyltransferase -0.0281708
HMGB1 high mobility group box 1 -0.0267336
LAMA4 laminin, alpha 4 -0.0267
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0266527
GOLT1B golgi transport 1B -0.0266185
MYO6 myosin VI -0.0265736
NIPBL Nipped-B homolog (Drosophila) -0.026318
CLINT1 clathrin interactor 1 -0.0258655
RAB10 RAB10, member RAS oncogene family -0.0255403
TMC5 transmembrane channel-like 5 -0.0251297
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0250694
MYO1E myosin IE -0.0248427
TJP1 tight junction protein 1 -0.0242222
PTMA prothymosin, alpha -0.0241839
RTN3 reticulon 3 -0.0236065
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0235237
NTN4 netrin 4 -0.0230748
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0230417
RPS5 ribosomal protein S5 -0.0230043
GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 -0.0227744
FOXO1 forkhead box O1 -0.0227499
FAM135A family with sequence similarity 135, member A -0.0226548
POF1B premature ovarian failure, 1B -0.0225286
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.022497
UBR1 ubiquitin protein ligase E3 component n-recognin 1 -0.0223133
CEP350 centrosomal protein 350kDa -0.0215588
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0213773
SKP1 S-phase kinase-associated protein 1 -0.0212101
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0209122
MAGT1 magnesium transporter 1 -0.020835
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0208156
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.0205735
MMP7 matrix metallopeptidase 7 -0.0203667
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0203573
FTH1 ferritin, heavy polypeptide 1 -0.0202697
SEC24A SEC24 family member A -0.0200295
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0199791
IFIH1 interferon induced with helicase C domain 1 -0.0199192
PAPOLA poly(A) polymerase alpha -0.0195825
IFNGR1 interferon gamma receptor 1 -0.0195133
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0194798
IL6ST interleukin 6 signal transducer -0.0194756
CSNK1A1 casein kinase 1, alpha 1 -0.0192109
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0191512
EML4 echinoderm microtubule associated protein like 4 -0.0191495
GPHN gephyrin -0.0191336
ASPH aspartate beta-hydroxylase -0.0191021
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0190213
TXNRD1 thioredoxin reductase 1 -0.0189982
UFM1 ubiquitin-fold modifier 1 -0.0189938
TM9SF3 transmembrane 9 superfamily member 3 -0.0187888
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0183222
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0182683
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0182424