Irinotecan (hydrochloride)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.160871
LRMDA leucine rich melanocyte differentiation associated 0.10142
C3 complement component 3 0.099314
IGFBP1 insulin-like growth factor binding protein 1 0.0699748
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0697499
AFDN afadin, adherens junction formation factor 0.0680433
MYH9 myosin, heavy chain 9, non-muscle 0.0656772
SAMD4A sterile alpha motif domain containing 4A 0.0642103
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0632471
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0558054
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0545795
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0520735
RPL3 ribosomal protein L3 0.0517094
PTPRM protein tyrosine phosphatase, receptor type, M 0.0508162
MED13L mediator complex subunit 13-like 0.0489776
TOP1 topoisomerase (DNA) I 0.0473527
TNS1 tensin 1 0.0471709
PTK2 protein tyrosine kinase 2 0.0464764
MSI2 musashi RNA-binding protein 2 0.0451235
PLEC plectin 0.0450026
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0449689
ZMIZ1 zinc finger, MIZ-type containing 1 0.0446967
ZNF292 zinc finger protein 292 0.0445362
SRRM2 serine/arginine repetitive matrix 2 0.0440523
RPS12 ribosomal protein S12 0.0436599
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0430244
SIK3 SIK family kinase 3 0.0428468
SVIL supervillin 0.0425729
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0420356
KIAA1217 KIAA1217 0.0415872
EIF4B eukaryotic translation initiation factor 4B 0.0414141
SMAD3 SMAD family member 3 0.0412915
EEF2 eukaryotic translation elongation factor 2 0.0406191
NACA nascent polypeptide-associated complex alpha subunit 0.0399396
WDFY2 WD repeat and FYVE domain containing 2 0.039734
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0396626
NFIA nuclear factor I/A 0.0392218
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0390725
CRLS1 cardiolipin synthase 1 0.0386445
IQSEC1 IQ motif and Sec7 domain 1 0.0372097
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0368697
CCNY cyclin Y 0.0363196
FOXN3 forkhead box N3 0.0360515
RPL4 ribosomal protein L4 0.0358368
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0357292
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0356246
VEGFA vascular endothelial growth factor A 0.0355802
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0351615
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0350954
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0348405
ANKRD11 ankyrin repeat domain 11 0.0348067
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0348052
CMIP c-Maf inducing protein 0.034468
PRELID2 PRELI domain containing 2 0.0335915
NCKAP1 NCK-associated protein 1 0.0333055
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0330613
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0326964
JMJD1C jumonji domain containing 1C 0.0326773
SETD5 SET domain containing 5 0.032641
RBM33 RNA binding motif protein 33 0.0326128
PDE4D phosphodiesterase 4D, cAMP-specific 0.0325476
MACF1 microtubule-actin crosslinking factor 1 0.0318403
TNRC6A trinucleotide repeat containing 6A 0.031818
FNDC3B fibronectin type III domain containing 3B 0.0316992
PTBP3 polypyrimidine tract binding protein 3 0.0313915
PDE8A phosphodiesterase 8A 0.0307676
DOCK4 dedicator of cytokinesis 4 0.0307548
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0306516
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0305109
PHYHIPL phytanoyl-CoA 2-hydroxylase interacting protein-like 0.0302521
HLF hepatic leukemia factor 0.0300917
TNS3 tensin 3 0.0294975
DENND1A DENN/MADD domain containing 1A 0.0294949
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0294693
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0291419
PUM2 pumilio RNA-binding family member 2 0.0287798
ZFAND3 zinc finger, AN1-type domain 3 0.0286793
RB1CC1 RB1-inducible coiled-coil 1 0.0285816
MYO1B myosin IB 0.0285564
WAC WW domain containing adaptor with coiled-coil 0.0284768
TF transferrin 0.0283065
OGA O-GlcNAcase 0.028047
BRD4 bromodomain containing 4 0.0280329
HSPA8 heat shock 70kDa protein 8 0.0276298
TNIP1 TNFAIP3 interacting protein 1 0.027501
RPL23 ribosomal protein L23 0.0274318
ICAM1 intercellular adhesion molecule 1 0.0273125
RNF43 ring finger protein 43 0.0272175
MEIS2 Meis homeobox 2 0.027001
KRT8 keratin 8, type II 0.0266691
HELZ helicase with zinc finger 0.0266012
GSE1 Gse1 coiled-coil protein 0.0265665
PRRC2C proline-rich coiled-coil 2C 0.0262115
ANO6 anoctamin 6 0.026207
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.026099
NFE2L1 nuclear factor, erythroid 2-like 1 0.0259176
KDM6A lysine (K)-specific demethylase 6A 0.0259087
A1CF APOBEC1 complementation factor 0.0258258
CAMTA1 calmodulin binding transcription activator 1 0.0258213
MTSS1 metastasis suppressor 1 0.02559

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.300621
AKAP12 A kinase (PRKA) anchor protein 12 -0.18604
MT2A metallothionein 2A -0.160346
SLC38A2 solute carrier family 38, member 2 -0.142447
EHBP1 EH domain binding protein 1 -0.119273
FBF1 Fas (TNFRSF6) binding factor 1 -0.114346
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.108647
GPC6 glypican 6 -0.0995075
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0974196
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0929796
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0887033
FTL ferritin, light polypeptide -0.0837205
DST dystonin -0.0823947
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0773692
FN1 fibronectin 1 -0.075462
CP ceruloplasmin (ferroxidase) -0.0747776
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.069754
VCL vinculin -0.0688677
ENO1 enolase 1, (alpha) -0.0639393
AHSG alpha-2-HS-glycoprotein -0.0637759
FRMD5 FERM domain containing 5 -0.0598851
TM4SF1 transmembrane 4 L six family member 1 -0.0581662
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0575096
APOA2 apolipoprotein A-II -0.0532029
TMEM123 transmembrane protein 123 -0.0518765
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0509513
GK glycerol kinase -0.0486913
NPAS2 neuronal PAS domain protein 2 -0.0480694
GMDS GDP-mannose 4,6-dehydratase -0.0479416
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0471314
GPC3 glypican 3 -0.0446799
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.043898
TRIM26 tripartite motif containing 26 -0.0429189
NDRG1 N-myc downstream regulated 1 -0.0423089
IER3 immediate early response 3 -0.0422772
TMSB10 thymosin beta 10 -0.0422305
SLC38A1 solute carrier family 38, member 1 -0.0416624
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0415816
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0411808
GNAS GNAS complex locus -0.0402985
EGR1 early growth response 1 -0.0398941
PDGFB platelet-derived growth factor beta polypeptide -0.0396236
CCL20 chemokine (C-C motif) ligand 20 -0.0396037
DLC1 DLC1 Rho GTPase activating protein -0.0386964
ZBTB20 zinc finger and BTB domain containing 20 -0.038486
ASPH aspartate beta-hydroxylase -0.0376478
CANX calnexin -0.0370176
STK17A serine/threonine kinase 17a -0.0369585
FAM107B family with sequence similarity 107, member B -0.0336595
FILIP1L filamin A interacting protein 1-like -0.0334659
TPM4 tropomyosin 4 -0.0334569
RPS24 ribosomal protein S24 -0.0330123
MAML2 mastermind-like 2 (Drosophila) -0.0330098
APOE apolipoprotein E -0.032086
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0320203
GCC2 GRIP and coiled-coil domain containing 2 -0.0314337
ITGAV integrin, alpha V -0.0314231
LOX lysyl oxidase -0.0310052
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0298915
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0295966
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0295897
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0295708
HMGA1 high mobility group AT-hook 1 -0.0295504
LYZ lysozyme -0.029215
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0288999
EML4 echinoderm microtubule associated protein like 4 -0.0286133
RPLP1 ribosomal protein, large, P1 -0.028484
TFRC transferrin receptor -0.0282467
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0281274
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.027701
ITGA1 integrin, alpha 1 -0.0276888
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0276756
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0268529
NPR2 natriuretic peptide receptor 2 -0.0268062
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0266962
UBASH3B ubiquitin associated and SH3 domain containing B -0.0265969
MATN3 matrilin 3 -0.0265762
IFITM3 interferon induced transmembrane protein 3 -0.0262153
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0255831
PDIA3 protein disulfide isomerase family A, member 3 -0.0254972
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0252409
H1-0 H1.0 linker histone -0.0246223
GDF15 growth differentiation factor 15 -0.0246005
IFITM1 interferon induced transmembrane protein 1 -0.0244838
MAP1B microtubule-associated protein 1B -0.0243198
MT1X metallothionein 1X -0.023774
PDLIM5 PDZ and LIM domain 5 -0.0234779
SOX4 SRY (sex determining region Y)-box 4 -0.0234592
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0231543
PATJ PATJ crumbs cell polarity complex component -0.0229377
NCOA7 nuclear receptor coactivator 7 -0.022817
RYBP RING1 and YY1 binding protein -0.0223797
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0223136
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0223072
LDHA lactate dehydrogenase A -0.0221762
UBC ubiquitin C -0.0221485
RPL35A ribosomal protein L35a -0.021967
PLIN2 perilipin 2 -0.0218568
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0213945
IFI6 interferon, alpha-inducible protein 6 -0.0213434