Irinotecan (hydrochloride)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DTNA dystrobrevin, alpha 0.23367
RUNX1 runt-related transcription factor 1 0.104059
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0907862
SRRM2 serine/arginine repetitive matrix 2 0.0905706
CD109 CD109 molecule 0.0890003
GPC6 glypican 6 0.0814249
NUP58 nucleoporin 58 0.0801374
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0709182
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0700544
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0694355
ADAM9 ADAM metallopeptidase domain 9 0.0666011
TRIO trio Rho guanine nucleotide exchange factor 0.0661685
EIF1 eukaryotic translation initiation factor 1 0.0642666
HSPA8 heat shock 70kDa protein 8 0.0635684
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0619872
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.059731
RPS6 ribosomal protein S6 0.0581146
PGK1 phosphoglycerate kinase 1 0.0570556
ZNF292 zinc finger protein 292 0.0566165
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.053714
RNF145 ring finger protein 145 0.0527129
MYH9 myosin, heavy chain 9, non-muscle 0.0501218
YEATS2 YEATS domain containing 2 0.0495192
MED13L mediator complex subunit 13-like 0.0488379
RPS12 ribosomal protein S12 0.0477546
RPL23 ribosomal protein L23 0.0474917
KTN1 kinectin 1 (kinesin receptor) 0.047399
SMYD3 SET and MYND domain containing 3 0.0468567
OGA O-GlcNAcase 0.0463842
ACTG1 actin gamma 1 0.0461124
KDM3A lysine (K)-specific demethylase 3A 0.0455011
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0447896
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0446243
MMP12 matrix metallopeptidase 12 0.0445509
SAMD4A sterile alpha motif domain containing 4A 0.0433884
FLNA filamin A, alpha 0.0433122
EIF4B eukaryotic translation initiation factor 4B 0.0432252
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0423531
ZMYM2 zinc finger, MYM-type 2 0.0422327
RPL37A ribosomal protein L37a 0.0418853
PRRC2C proline-rich coiled-coil 2C 0.0417587
SMAD3 SMAD family member 3 0.039716
KMT2C lysine (K)-specific methyltransferase 2C 0.0393764
PICALM phosphatidylinositol binding clathrin assembly protein 0.0389242
PTK2 protein tyrosine kinase 2 0.0388617
PRELID2 PRELI domain containing 2 0.0388343
HELZ helicase with zinc finger 0.0385029
ATXN1 ataxin 1 0.0382938
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0382025
RPL21 ribosomal protein L21 0.0381465
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0380009
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0379463
NACA nascent polypeptide-associated complex alpha subunit 0.0378728
HOOK2 hook microtubule-tethering protein 2 0.0376695
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0375566
ZFAND3 zinc finger, AN1-type domain 3 0.037543
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0375316
MSN moesin 0.037076
CDK19 cyclin-dependent kinase 19 0.0368393
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0363463
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0359682
RB1CC1 RB1-inducible coiled-coil 1 0.0359216
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0359015
PCBP2 poly(rC) binding protein 2 0.0358666
TPM3 tropomyosin 3 0.0355339
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.035512
SMAP1 small ArfGAP 1 0.0355018
PRKCE protein kinase C, epsilon 0.0350826
WSB1 WD repeat and SOCS box containing 1 0.034732
GSK3B glycogen synthase kinase 3 beta 0.0346188
KDM4C lysine (K)-specific demethylase 4C 0.0343438
MXI1 MAX interactor 1, dimerization protein 0.034197
JARID2 jumonji, AT rich interactive domain 2 0.0340418
PNISR PNN-interacting serine/arginine-rich protein 0.0337988
RAB6A RAB6A, member RAS oncogene family 0.0336343
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0334588
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0331548
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0331227
ATP13A3 ATPase type 13A3 0.0329913
ANKRD12 ankyrin repeat domain 12 0.0329391
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0329085
LOC112694756 uncharaterized LOC112694756 0.0326581
SBF2 SET binding factor 2 0.0318022
LIMCH1 LIM and calponin homology domains 1 0.031646
EFNA5 ephrin-A5 0.0315396
NCKAP1 NCK-associated protein 1 0.0315039
MIDEAS mitotic deacetylase associated SANT domain protein 0.0314521
RBM33 RNA binding motif protein 33 0.0310743
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.030964
ANKRD11 ankyrin repeat domain 11 0.0307864
NBAS neuroblastoma amplified sequence 0.0307645
ENO2 enolase 2 (gamma, neuronal) 0.030752
ARID1A AT rich interactive domain 1A (SWI-like) 0.030731
MAP2K1 mitogen-activated protein kinase kinase 1 0.0306999
NCOR2 nuclear receptor corepressor 2 0.03069
DLG1 discs, large homolog 1 (Drosophila) 0.030675
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0306216
FGFR1 fibroblast growth factor receptor 1 0.0305214
BBX bobby sox homolog (Drosophila) 0.0305171
OSBPL8 oxysterol binding protein-like 8 0.0303205

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.30952
VIM vimentin -0.199281
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0851015
EGR1 early growth response 1 -0.0846915
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0806262
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0767799
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0745597
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0724777
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0615456
NABP1 nucleic acid binding protein 1 -0.0577038
AKAP12 A kinase (PRKA) anchor protein 12 -0.0563431
VCL vinculin -0.0561561
FTL ferritin, light polypeptide -0.0560733
KYNU kynureninase -0.0498489
CD44 CD44 molecule (Indian blood group) -0.0498072
INTS6 integrator complex subunit 6 -0.047185
AHNAK AHNAK nucleoprotein -0.047051
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0430432
HMGA2 high mobility group AT-hook 2 -0.0420928
SAMD3 sterile alpha motif domain containing 3 -0.0419281
TMSB10 thymosin beta 10 -0.0404883
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0400047
HDAC9 histone deacetylase 9 -0.0385526
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0357947
RPLP0 ribosomal protein, large, P0 -0.0315151
TNNC1 troponin C type 1 (slow) -0.031094
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0308164
SP100 SP100 nuclear antigen -0.0306897
PTCHD4 patched domain containing 4 -0.0296002
SDCCAG8 serologically defined colon cancer antigen 8 -0.029161
RPS24 ribosomal protein S24 -0.0272444
WNT2B wingless-type MMTV integration site family, member 2B -0.0269878
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0268281
IER3 immediate early response 3 -0.026565
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0262736
RPLP1 ribosomal protein, large, P1 -0.0259785
ZNF217 zinc finger protein 217 -0.0259061
RIGI RNA sensor RIG-I -0.0258144
RAB7A RAB7A, member RAS oncogene family -0.0257505
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0256332
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0254464
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0252162
ZNF804A zinc finger protein 804A -0.0251974
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0249573
RPS25 ribosomal protein S25 -0.0246847
JUN jun proto-oncogene -0.0246732
RACK1 receptor for activated C kinase 1 -0.0240864
EMP1 epithelial membrane protein 1 -0.0233943
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0232861
HAS2 hyaluronan synthase 2 -0.0225253
RAI14 retinoic acid induced 14 -0.0223672
CCND1 cyclin D1 -0.02218
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0221272
FRMD6 FERM domain containing 6 -0.0216565
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.021244
NETO1 neuropilin (NRP) and tolloid (TLL)-like 1 -0.0212368
IPO7 importin 7 -0.0209419
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0208095
CCL20 chemokine (C-C motif) ligand 20 -0.0207837
CTSB cathepsin B -0.0207783
CD163L1 CD163 molecule-like 1 -0.0207264
LIMA1 LIM domain and actin binding 1 -0.0206911
FOXP1 forkhead box P1 -0.0205308
VEPH1 ventricular zone expressed PH domain-containing 1 -0.0204574
GADD45A growth arrest and DNA-damage-inducible, alpha -0.0204236
RIMS2 regulating synaptic membrane exocytosis 2 -0.0198947
IFI16 interferon, gamma-inducible protein 16 -0.0198182
ZNF207 zinc finger protein 207 -0.0198154
ADAM32 ADAM metallopeptidase domain 32 -0.0197257
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0197234
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0196744
PTPRK protein tyrosine phosphatase, receptor type, K -0.0193992
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0190484
LOC102724023 ES1 protein homolog, mitochondrial -0.0188396
SAMD9 sterile alpha motif domain containing 9 -0.0185453
SLC38A2 solute carrier family 38, member 2 -0.0185337
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0184776
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0184764
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0184644
RPS2 ribosomal protein S2 -0.0183841
KLF6 Kruppel-like factor 6 -0.0183469
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 -0.0182757
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 -0.0181834
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0181554
TMPRSS15 transmembrane protease, serine 15 -0.0180758
FBN2 fibrillin 2 -0.0180676
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0180342
GLIPR1 GLI pathogenesis-related 1 -0.0179687
ERBIN erbb2 interacting protein -0.0179352
DLC1 DLC1 Rho GTPase activating protein -0.017882
INHBA inhibin, beta A -0.0178708
MORF4L2 mortality factor 4 like 2 -0.0177978
NTM neurotrimin -0.0176817
RPL6 ribosomal protein L6 -0.0176425
EFNB2 ephrin-B2 -0.01753
FN1 fibronectin 1 -0.017354
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0170381
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0167847
ITGA6 integrin, alpha 6 -0.0167587
NAV3 neuron navigator 3 -0.0166168