Irinotecan (hydrochloride)_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor 0.219744
TXNRD1 thioredoxin reductase 1 0.118861
PLEC plectin 0.11801
GCLC glutamate-cysteine ligase, catalytic subunit 0.100489
TBC1D22A TBC1 domain family, member 22A 0.0926512
LOC112694756 uncharaterized LOC112694756 0.088969
SRRM2 serine/arginine repetitive matrix 2 0.0856727
PDE4D phosphodiesterase 4D, cAMP-specific 0.083078
MYH9 myosin, heavy chain 9, non-muscle 0.0792634
SMAD3 SMAD family member 3 0.0676671
HDLBP high density lipoprotein binding protein 0.0606565
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.057449
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0550557
FAM13A family with sequence similarity 13, member A 0.0550042
CAMTA1 calmodulin binding transcription activator 1 0.0540612
PGK1 phosphoglycerate kinase 1 0.0491133
LAMB3 laminin, beta 3 0.0483896
ANKRD11 ankyrin repeat domain 11 0.0476753
MKI67 marker of proliferation Ki-67 0.0472416
RPS3 ribosomal protein S3 0.0463729
NDE1 nudE neurodevelopment protein 1 0.0431242
RUNX1 runt-related transcription factor 1 0.0425403
PRRC2C proline-rich coiled-coil 2C 0.042124
TNIP1 TNFAIP3 interacting protein 1 0.0420989
TMEM165 transmembrane protein 165 0.0417372
OGA O-GlcNAcase 0.0404806
ANKRD10 ankyrin repeat domain 10 0.0404442
EEF2 eukaryotic translation elongation factor 2 0.0401881
DOCK5 dedicator of cytokinesis 5 0.0400448
AGO2 argonaute RISC catalytic component 2 0.039953
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0396921
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0395306
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0382824
LIMCH1 LIM and calponin homology domains 1 0.0381655
YEATS2 YEATS domain containing 2 0.0381645
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 0.0367819
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0367254
CPE carboxypeptidase E 0.0365915
LAMC2 laminin, gamma 2 0.0365072
CTTN cortactin 0.0362751
ZC3H11A zinc finger CCCH-type containing 11A 0.0361604
SLTM SAFB-like, transcription modulator 0.0353997
H1-0 H1.0 linker histone 0.0348037
RPL4 ribosomal protein L4 0.0347437
ZNF638 zinc finger protein 638 0.0347133
TOP1 topoisomerase (DNA) I 0.0342111
AHNAK AHNAK nucleoprotein 0.034051
CES1 carboxylesterase 1 0.0340084
IRS2 insulin receptor substrate 2 0.0339093
ANO6 anoctamin 6 0.0337441
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0337008
MGST1 microsomal glutathione S-transferase 1 0.033682
RPL3 ribosomal protein L3 0.0335592
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0332483
ZNF292 zinc finger protein 292 0.0322298
TNRC6A trinucleotide repeat containing 6A 0.0320946
PRELID2 PRELI domain containing 2 0.0319021
EYA2 EYA transcriptional coactivator and phosphatase 2 0.030907
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0298744
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0296431
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0295134
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0294948
NACA nascent polypeptide-associated complex alpha subunit 0.0294853
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0291349
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0290621
JAK1 Janus kinase 1 0.0285671
GIGYF2 GRB10 interacting GYF protein 2 0.0284026
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0283843
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0283362
SON SON DNA binding protein 0.0281845
ADAR adenosine deaminase, RNA-specific 0.0279871
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0278922
HSPA8 heat shock 70kDa protein 8 0.0275182
PCBP2 poly(rC) binding protein 2 0.0274507
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0268839
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0267877
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0264647
KANSL1 KAT8 regulatory NSL complex subunit 1 0.026408
ACIN1 apoptotic chromatin condensation inducer 1 0.0260742
RNF213 ring finger protein 213 0.0259443
EIF1 eukaryotic translation initiation factor 1 0.0258672
RNF145 ring finger protein 145 0.0253879
EIF4B eukaryotic translation initiation factor 4B 0.0253636
ARGLU1 arginine and glutamate rich 1 0.0252857
KIAA1217 KIAA1217 0.0245365
TMCO3 transmembrane and coiled-coil domains 3 0.0244671
KRT18 keratin 18, type I 0.0243834
AKAP9 A kinase (PRKA) anchor protein 9 0.0243813
SMYD3 SET and MYND domain containing 3 0.0242581
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0242119
TES testin LIM domain protein 0.0242008
MCTP1 multiple C2 domains, transmembrane 1 0.0241952
TPD52 tumor protein D52 0.0241898
EIF4H eukaryotic translation initiation factor 4H 0.0241795
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0240965
ARHGAP32 Rho GTPase activating protein 32 0.0238465
RNF169 ring finger protein 169 0.0236833
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0236824
MAP3K4 mitogen-activated protein kinase kinase kinase 4 0.0236431
ZBTB1 zinc finger and BTB domain containing 1 0.0235948

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.385767
NDRG1 N-myc downstream regulated 1 -0.0952893
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0929309
FTH1 ferritin, heavy polypeptide 1 -0.0878002
TMSB10 thymosin beta 10 -0.0861341
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0760607
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0734725
STC1 stanniocalcin 1 -0.0708555
INTS6 integrator complex subunit 6 -0.0656938
PTMA prothymosin, alpha -0.0655021
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0621157
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.061247
ACTG1 actin gamma 1 -0.060898
FTL ferritin, light polypeptide -0.0604426
THSD4 thrombospondin, type I, domain containing 4 -0.0575367
EGR1 early growth response 1 -0.0566322
S100A10 S100 calcium binding protein A10 -0.0564468
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.049442
IER3 immediate early response 3 -0.0479041
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0464653
NABP1 nucleic acid binding protein 1 -0.0454632
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0430004
RAB7A RAB7A, member RAS oncogene family -0.0428379
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0408377
MT2A metallothionein 2A -0.0406583
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0400913
KMT2E lysine (K)-specific methyltransferase 2E -0.0385
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0376157
MORF4L2 mortality factor 4 like 2 -0.0361781
TSC22D2 TSC22 domain family, member 2 -0.0352533
FBXO11 F-box protein 11 -0.0347868
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.034015
BTG1 B-cell translocation gene 1, anti-proliferative -0.0338618
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0317658
AREG amphiregulin -0.0317445
RPL35A ribosomal protein L35a -0.0315383
IFI6 interferon, alpha-inducible protein 6 -0.0310363
MYO1E myosin IE -0.0306451
HMGA1 high mobility group AT-hook 1 -0.0304176
CST3 cystatin C -0.0301196
ANKRD37 ankyrin repeat domain 37 -0.0298177
PDLIM5 PDZ and LIM domain 5 -0.0297785
SP100 SP100 nuclear antigen -0.0282647
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0273766
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0271814
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0269604
VCL vinculin -0.0268975
SOD2 superoxide dismutase 2, mitochondrial -0.0267382
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0267201
MCL1 myeloid cell leukemia 1 -0.0265911
POTEF POTE ankyrin domain family, member F -0.0261198
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0259669
C15ORF48 chromosome 15 open reading frame 48 -0.0256666
RPLP1 ribosomal protein, large, P1 -0.0253776
TPM4 tropomyosin 4 -0.0252296
CDCP1 CUB domain containing protein 1 -0.0250983
RAP1B RAP1B, member of RAS oncogene family -0.0249439
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0239518
USP53 ubiquitin specific peptidase 53 -0.0238485
FNDC3B fibronectin type III domain containing 3B -0.0236754
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0235189
SCEL sciellin -0.0233276
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0232407
BLZF1 basic leucine zipper nuclear factor 1 -0.0229896
SPAG9 sperm associated antigen 9 -0.022933
TPT1 tumor protein, translationally-controlled 1 -0.0226854
LDHA lactate dehydrogenase A -0.0224887
S100A11 S100 calcium binding protein A11 -0.0222748
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0222648
WASF2 WAS protein family, member 2 -0.0215284
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0214538
HILPDA hypoxia inducible lipid droplet-associated -0.021318
LOC102724023 ES1 protein homolog, mitochondrial -0.0213138
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0207749
ELL2 elongation factor, RNA polymerase II, 2 -0.0203251
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0202266
RPS25 ribosomal protein S25 -0.0201942
KPNB1 karyopherin (importin) beta 1 -0.0201547
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.02013
AKAP12 A kinase (PRKA) anchor protein 12 -0.0197562
RIMS2 regulating synaptic membrane exocytosis 2 -0.0197169
RYBP RING1 and YY1 binding protein -0.0196008
CCNL1 cyclin L1 -0.0195604
IGFBP3 insulin-like growth factor binding protein 3 -0.0194316
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0191809
HOMER1 homer scaffolding protein 1 -0.0190014
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0186184
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0186135
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0182692
ATG7 autophagy related 7 -0.0182424
SPDYA speedy/RINGO cell cycle regulator family member A -0.0181535
FUS FUS RNA binding protein -0.0181123
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0180051
LMO7 LIM domain 7 -0.0179242
CAV2 caveolin 2 -0.0174496
VDAC1 voltage-dependent anion channel 1 -0.0170284
OXSR1 oxidative stress responsive 1 -0.016864
CCNI cyclin I -0.0166535
SLC38A1 solute carrier family 38, member 1 -0.0164371
MYO1D myosin ID -0.0163531