Irinotecan (hydrochloride)_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.129998
GRB10 growth factor receptor-bound protein 10 0.119426
ACTG1 actin gamma 1 0.115249
PLEC plectin 0.112758
FN1 fibronectin 1 0.110835
RPL23 ribosomal protein L23 0.108992
PGK1 phosphoglycerate kinase 1 0.0947
EIF1 eukaryotic translation initiation factor 1 0.0898888
FAM13A family with sequence similarity 13, member A 0.0883298
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0816601
TRIO trio Rho guanine nucleotide exchange factor 0.0765816
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0735866
HLA-B major histocompatibility complex, class I, B 0.072555
FLNB filamin B, beta 0.0721007
KRT8 keratin 8, type II 0.0718822
NDRG1 N-myc downstream regulated 1 0.06863
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0677065
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0668491
FNDC3B fibronectin type III domain containing 3B 0.0660621
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0647907
LOC112694756 uncharaterized LOC112694756 0.0647361
VEGFA vascular endothelial growth factor A 0.0643878
RUNX1 runt-related transcription factor 1 0.0643867
LIMCH1 LIM and calponin homology domains 1 0.0630493
TMSB4X thymosin beta 4, X-linked 0.0625507
CD109 CD109 molecule 0.0608219
KRT7 keratin 7, type II 0.0604047
HSPA8 heat shock 70kDa protein 8 0.0603811
RNF145 ring finger protein 145 0.0595016
SRRM2 serine/arginine repetitive matrix 2 0.0571481
CALR calreticulin 0.0562052
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0556599
PPARD peroxisome proliferator-activated receptor delta 0.0552814
RPL4 ribosomal protein L4 0.0540855
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0536966
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.052612
APLP2 amyloid beta (A4) precursor-like protein 2 0.0522759
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0518743
LAMB3 laminin, beta 3 0.0513755
HLA-A major histocompatibility complex, class I, A 0.0512135
PLAU plasminogen activator, urokinase 0.049744
SEC23A Sec23 homolog A (S. cerevisiae) 0.0496028
ANKRD11 ankyrin repeat domain 11 0.0494072
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0491996
OGA O-GlcNAcase 0.049147
KRT18 keratin 18, type I 0.0481775
RPL9 ribosomal protein L9 0.0480057
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0478871
NACA nascent polypeptide-associated complex alpha subunit 0.0465187
RPS3 ribosomal protein S3 0.0464348
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0461756
ZNF292 zinc finger protein 292 0.045585
NAV2 neuron navigator 2 0.0452921
CTBP2 C-terminal binding protein 2 0.0449568
RPL11 ribosomal protein L11 0.0443571
RPL35A ribosomal protein L35a 0.0442453
SMAD3 SMAD family member 3 0.0441143
GARS1 glycyl-tRNA synthetase 1 0.0438562
TMED9 transmembrane emp24 protein transport domain containing 9 0.0430789
CCNY cyclin Y 0.0430785
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.042757
TPT1 tumor protein, translationally-controlled 1 0.0426869
SAMD4A sterile alpha motif domain containing 4A 0.0421561
RPS19 ribosomal protein S19 0.0409226
AHDC1 AT hook, DNA binding motif, containing 1 0.0407616
BZW1 basic leucine zipper and W2 domains 1 0.0406223
RPS12 ribosomal protein S12 0.0404864
COPA coatomer protein complex, subunit alpha 0.0403626
BHLHE40 basic helix-loop-helix family, member e40 0.0392995
HELZ helicase with zinc finger 0.0392938
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0387241
MGST1 microsomal glutathione S-transferase 1 0.038592
PTK2 protein tyrosine kinase 2 0.0384619
ESRP1 epithelial splicing regulatory protein 1 0.0383345
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0371729
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0370219
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0368824
TMSB10 thymosin beta 10 0.0366298
FXR1 fragile X mental retardation, autosomal homolog 1 0.036162
EIF4B eukaryotic translation initiation factor 4B 0.0358764
MYOF myoferlin 0.0356892
ZNF148 zinc finger protein 148 0.0354339
RHOA ras homolog family member A 0.0351755
WSB1 WD repeat and SOCS box containing 1 0.0350097
AHNAK AHNAK nucleoprotein 0.0349788
COPG1 coatomer protein complex, subunit gamma 1 0.0343425
FLNA filamin A, alpha 0.0342779
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0338375
MPRIP myosin phosphatase Rho interacting protein 0.0336667
PCBP2 poly(rC) binding protein 2 0.0335978
PRRC2C proline-rich coiled-coil 2C 0.0334836
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.033435
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0329083
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.032512
EIF4H eukaryotic translation initiation factor 4H 0.0324836
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0323687
RPS20 ribosomal protein S20 0.03229
EEF2 eukaryotic translation elongation factor 2 0.032117
RPLP2 ribosomal protein, large, P2 0.0317849
MSI2 musashi RNA-binding protein 2 0.031751

decreased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.297167
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.239606
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.171794
POTEF POTE ankyrin domain family, member F -0.125626
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.124911
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0901511
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0885649
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0786192
CCND1 cyclin D1 -0.0615889
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0609768
MYO6 myosin VI -0.0586073
DTNA dystrobrevin, alpha -0.0581907
LMO7 LIM domain 7 -0.0580237
SDC4 syndecan 4 -0.0573125
RPS2 ribosomal protein S2 -0.0567332
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0524015
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0486323
DSG2 desmoglein 2 -0.0479315
ASPH aspartate beta-hydroxylase -0.0467328
RYBP RING1 and YY1 binding protein -0.038835
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0382622
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0380022
S100A10 S100 calcium binding protein A10 -0.0379293
VGLL3 vestigial-like family member 3 -0.0373945
ELL2 elongation factor, RNA polymerase II, 2 -0.0367733
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0350317
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0347785
PAPOLA poly(A) polymerase alpha -0.0345489
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0344478
IFIH1 interferon induced with helicase C domain 1 -0.0343021
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.034187
OSMR oncostatin M receptor -0.0331524
CD2AP CD2-associated protein -0.0321753
ZNF207 zinc finger protein 207 -0.0320732
IFI16 interferon, gamma-inducible protein 16 -0.0318962
FBXO32 F-box protein 32 -0.031408
DSPP dentin sialophosphoprotein -0.030716
ERBIN erbb2 interacting protein -0.0305663
AREG amphiregulin -0.0305631
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.030218
CANX calnexin -0.0293659
RAB7A RAB7A, member RAS oncogene family -0.0288828
TFPI2 tissue factor pathway inhibitor 2 -0.0288785
PDLIM5 PDZ and LIM domain 5 -0.0288214
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0274725
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0274569
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0271431
TJP1 tight junction protein 1 -0.0270487
ARHGAP5 Rho GTPase activating protein 5 -0.0269985
PLSCR1 phospholipid scramblase 1 -0.0267037
F3 coagulation factor III (thromboplastin, tissue factor) -0.026549
SP100 SP100 nuclear antigen -0.0263705
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0263178
GOLGB1 golgin B1 -0.0260602
GOLT1B golgi transport 1B -0.0260506
IL6ST interleukin 6 signal transducer -0.0260305
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0258649
FBXO11 F-box protein 11 -0.0254107
TMEM123 transmembrane protein 123 -0.0250354
STEAP4 STEAP family member 4 -0.0249278
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0249164
MX2 MX dynamin-like GTPase 2 -0.024904
MKI67 marker of proliferation Ki-67 -0.0247963
WASL Wiskott-Aldrich syndrome-like -0.0245209
RASA2 RAS p21 protein activator 2 -0.02433
USP53 ubiquitin specific peptidase 53 -0.0242801
MYO1E myosin IE -0.0235035
FAM3C family with sequence similarity 3, member C -0.0232102
ANXA1 annexin A1 -0.023148
CLTC clathrin, heavy chain (Hc) -0.0230967
SPAG9 sperm associated antigen 9 -0.0228414
MX1 MX dynamin-like GTPase 1 -0.0226278
IFI27 interferon, alpha-inducible protein 27 -0.0222096
C15ORF48 chromosome 15 open reading frame 48 -0.0222096
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme -0.0221858
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0219914
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0217575
CSNK1A1 casein kinase 1, alpha 1 -0.0216902
SLC38A1 solute carrier family 38, member 1 -0.0214532
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0210949
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0210454
TXNRD1 thioredoxin reductase 1 -0.0205749
CCNL1 cyclin L1 -0.0205712
STK17A serine/threonine kinase 17a -0.0205428
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0204903
FTL ferritin, light polypeptide -0.02034
UGDH UDP-glucose 6-dehydrogenase -0.0203337
EXT1 exostosin glycosyltransferase 1 -0.0202416
GPBP1 GC-rich promoter binding protein 1 -0.0200344
ARHGAP20 Rho GTPase activating protein 20 -0.0199621
HMGA1 high mobility group AT-hook 1 -0.0197945
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0196216
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0192561
LAP3 leucine aminopeptidase 3 -0.0191699
MED13 mediator complex subunit 13 -0.0191489
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0188289
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0188132
CHD1 chromodomain helicase DNA binding protein 1 -0.0187298
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0187292
EGR1 early growth response 1 -0.0184502