Irinotecan (hydrochloride)_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.126771
PGK1 phosphoglycerate kinase 1 0.126247
RERE arginine-glutamic acid dipeptide (RE) repeats 0.121099
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.11877
ZNF292 zinc finger protein 292 0.117313
FNDC3B fibronectin type III domain containing 3B 0.101665
GOLGA4 golgin A4 0.100751
PUM2 pumilio RNA-binding family member 2 0.0979419
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0923551
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0900347
NBAS neuroblastoma amplified sequence 0.0899179
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0831271
TMSB10 thymosin beta 10 0.0824458
TAS2R14 taste receptor, type 2, member 14 0.0772538
PSD3 pleckstrin and Sec7 domain containing 3 0.0741807
RUNX1 runt-related transcription factor 1 0.0731851
MYH9 myosin, heavy chain 9, non-muscle 0.0720072
SETD5 SET domain containing 5 0.0692801
BRD4 bromodomain containing 4 0.0692083
ANKRD11 ankyrin repeat domain 11 0.068966
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0675863
KDM3A lysine (K)-specific demethylase 3A 0.0662579
MARCHF6 membrane associated ring-CH-type finger 6 0.0642539
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0639389
SAMD4A sterile alpha motif domain containing 4A 0.0618537
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0606257
RPL31 ribosomal protein L31 0.0595299
KMT2E lysine (K)-specific methyltransferase 2E 0.059272
NF1 neurofibromin 1 0.0586056
HELZ helicase with zinc finger 0.0576513
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0567462
COG5 component of oligomeric golgi complex 5 0.0555207
DTNA dystrobrevin, alpha 0.0552729
LMO7 LIM domain 7 0.0552618
TTC3 tetratricopeptide repeat domain 3 0.054076
NDRG1 N-myc downstream regulated 1 0.0538104
SRPK2 SRSF protein kinase 2 0.0536755
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0533595
NUP58 nucleoporin 58 0.053173
ARID4B AT rich interactive domain 4B (RBP1-like) 0.052902
LDHA lactate dehydrogenase A 0.0507852
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0502294
MED13L mediator complex subunit 13-like 0.0498068
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0491391
OLA1 Obg-like ATPase 1 0.0488743
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0485682
ESYT2 extended synaptotagmin-like protein 2 0.0483274
CCNY cyclin Y 0.0477733
ERRFI1 ERBB receptor feedback inhibitor 1 0.0470121
EEF2 eukaryotic translation elongation factor 2 0.046946
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0456729
GPC6 glypican 6 0.0450467
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0435178
AKAP12 A kinase (PRKA) anchor protein 12 0.0428524
EFNA5 ephrin-A5 0.0415338
ZNF638 zinc finger protein 638 0.0409785
CERS6 ceramide synthase 6 0.0408388
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0399191
ACTG1 actin gamma 1 0.0397299
COPA coatomer protein complex, subunit alpha 0.038616
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0383077
EZR ezrin 0.0373174
TBC1D22A TBC1 domain family, member 22A 0.037205
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.036773
WAC WW domain containing adaptor with coiled-coil 0.0363851
FTL ferritin, light polypeptide 0.0357336
ZCCHC7 zinc finger, CCHC domain containing 7 0.0355945
DENND5B DENN/MADD domain containing 5B 0.0349301
DOCK5 dedicator of cytokinesis 5 0.0338384
RAB6A RAB6A, member RAS oncogene family 0.0335291
PARD3 par-3 family cell polarity regulator 0.0330819
NBEAL1 neurobeachin-like 1 0.0324754
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0321628
MED13 mediator complex subunit 13 0.0320953
ANKRD12 ankyrin repeat domain 12 0.0316834
SND1 staphylococcal nuclease and tudor domain containing 1 0.0315665
PHIP pleckstrin homology domain interacting protein 0.0306249
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.030593
ADAM10 ADAM metallopeptidase domain 10 0.0305358
GSK3B glycogen synthase kinase 3 beta 0.0298181
PTBP2 polypyrimidine tract binding protein 2 0.0296725
OGA O-GlcNAcase 0.0286425
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0276712
RBM39 RNA binding motif protein 39 0.0274615
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0272205
GRB10 growth factor receptor-bound protein 10 0.026226
PTPRM protein tyrosine phosphatase, receptor type, M 0.0261675
RPS6 ribosomal protein S6 0.0250813
RPS27A ribosomal protein S27a 0.0248377
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0248054
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0241549
RAB10 RAB10, member RAS oncogene family 0.0237603
TLK1 tousled-like kinase 1 0.0235778
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0234119
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0228661
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0224903
PRKCA protein kinase C, alpha 0.0224834
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0222571
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0221598
FMN1 formin 1 0.0220762

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.16552
LAMA4 laminin, alpha 4 -0.158682
VIM vimentin -0.157195
CXCL8 chemokine (C-X-C motif) ligand 8 -0.153814
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.136644
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.125765
PDE4D phosphodiesterase 4D, cAMP-specific -0.120687
NKD1 naked cuticle homolog 1 (Drosophila) -0.116196
SLTM SAFB-like, transcription modulator -0.115069
RSF1 remodeling and spacing factor 1 -0.0997776
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0962044
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0960671
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0903614
GPHN gephyrin -0.0902688
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0893033
CAMTA1 calmodulin binding transcription activator 1 -0.0845485
TXNRD1 thioredoxin reductase 1 -0.0824821
MT2A metallothionein 2A -0.0804967
GCLC glutamate-cysteine ligase, catalytic subunit -0.0754493
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0752641
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0746182
PIBF1 progesterone immunomodulatory binding factor 1 -0.0744248
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0743658
GOLGB1 golgin B1 -0.074133
SLC38A1 solute carrier family 38, member 1 -0.073881
TPT1 tumor protein, translationally-controlled 1 -0.0737005
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0736227
RAB7A RAB7A, member RAS oncogene family -0.0727459
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0691789
PTK2 protein tyrosine kinase 2 -0.0679622
ITGA6 integrin, alpha 6 -0.0668517
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0640139
CDH13 cadherin 13 -0.0618733
JARID2 jumonji, AT rich interactive domain 2 -0.0616988
KTN1 kinectin 1 (kinesin receptor) -0.0613346
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0587776
STC1 stanniocalcin 1 -0.0553897
EGFR epidermal growth factor receptor -0.0534871
SMC5 structural maintenance of chromosomes 5 -0.0534356
PDLIM5 PDZ and LIM domain 5 -0.0532865
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0524972
AOPEP aminopeptidase O (putative) -0.0523354
FNIP1 folliculin interacting protein 1 -0.0521003
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0517664
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0513846
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0512759
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0509303
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0504388
ADIPOR2 adiponectin receptor 2 -0.0502372
CCNI cyclin I -0.0498381
FAM13A family with sequence similarity 13, member A -0.0492049
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0477924
FNDC3A fibronectin type III domain containing 3A -0.0474201
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0459622
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) -0.0450544
NAV2 neuron navigator 2 -0.0412027
SMYD3 SET and MYND domain containing 3 -0.041019
CHD9 chromodomain helicase DNA binding protein 9 -0.04099
CMIP c-Maf inducing protein -0.0404938
SPAG9 sperm associated antigen 9 -0.0404703
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0394751
ELL2 elongation factor, RNA polymerase II, 2 -0.038999
RIGI RNA sensor RIG-I -0.0381592
PTBP3 polypyrimidine tract binding protein 3 -0.0368107
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0363954
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0361819
ANXA2 annexin A2 -0.0355137
PTMA prothymosin, alpha -0.0354776
PRKD3 protein kinase D3 -0.0353346
ATXN1 ataxin 1 -0.0349617
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0346859
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0343024
MAML2 mastermind-like 2 (Drosophila) -0.0341747
ALCAM activated leukocyte cell adhesion molecule -0.033315
CTBP2 C-terminal binding protein 2 -0.0326612
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0324306
GNS glucosamine (N-acetyl)-6-sulfatase -0.0319305
SSH2 slingshot protein phosphatase 2 -0.0306939
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0306106
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0289985
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0277744
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0275301
PRELID2 PRELI domain containing 2 -0.0274167
JMJD1C jumonji domain containing 1C -0.0273766
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0272724
DSCAM Down syndrome cell adhesion molecule -0.0272463
LSAMP limbic system-associated membrane protein -0.0272102
MARCHF7 membrane associated ring-CH-type finger 7 -0.0269084
SEPTIN2 septin 2 -0.026215
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0256663
PRRC2C proline-rich coiled-coil 2C -0.0254633
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0254616
TPI1 triosephosphate isomerase 1 -0.0248009
APP amyloid beta (A4) precursor protein -0.0242987
SEC31A SEC31 homolog A (S. cerevisiae) -0.0238123
COL8A1 collagen, type VIII, alpha 1 -0.023595
GLS2 glutaminase 2 (liver, mitochondrial) -0.023529
ACTN4 actinin, alpha 4 -0.0226702
CUL4A cullin 4A -0.0221658
SRRM2 serine/arginine repetitive matrix 2 -0.0219937