Irinotecan (hydrochloride)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.118839
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.116456
PGK1 phosphoglycerate kinase 1 0.109931
ANKRD11 ankyrin repeat domain 11 0.0913737
GOLGA4 golgin A4 0.0873974
HLA-B major histocompatibility complex, class I, B 0.0873946
ZFAND3 zinc finger, AN1-type domain 3 0.0723796
PDE4D phosphodiesterase 4D, cAMP-specific 0.0702894
ZNF292 zinc finger protein 292 0.0702738
SNAP25 synaptosomal-associated protein, 25kDa 0.0634516
NAMPT nicotinamide phosphoribosyltransferase 0.0623953
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0616166
COL6A2 collagen, type VI, alpha 2 0.0602849
GARS1 glycyl-tRNA synthetase 1 0.0586277
APOLD1 apolipoprotein L domain containing 1 0.0579361
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0556909
DSCAM Down syndrome cell adhesion molecule 0.0556778
CALU calumenin 0.0499083
FMNL2 formin-like 2 0.0490752
SRRM2 serine/arginine repetitive matrix 2 0.0485143
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0474911
ESYT2 extended synaptotagmin-like protein 2 0.0474472
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0470055
PLEC plectin 0.0458206
NCAM1 neural cell adhesion molecule 1 0.045346
PTK2 protein tyrosine kinase 2 0.0448457
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0442866
NAV2 neuron navigator 2 0.0435364
DOCK5 dedicator of cytokinesis 5 0.0429856
MCTP2 multiple C2 domains, transmembrane 2 0.0428717
YEATS2 YEATS domain containing 2 0.0428607
RPS6 ribosomal protein S6 0.0417541
PRRC2C proline-rich coiled-coil 2C 0.0410269
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0409623
MACF1 microtubule-actin crosslinking factor 1 0.0403836
PNISR PNN-interacting serine/arginine-rich protein 0.0402439
CALD1 caldesmon 1 0.0402313
SETD5 SET domain containing 5 0.0400043
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0381648
RB1CC1 RB1-inducible coiled-coil 1 0.0381577
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0379754
B2M beta-2-microglobulin 0.0364914
COL7A1 collagen, type VII, alpha 1 0.0363727
ATP13A3 ATPase type 13A3 0.0362296
TFPI2 tissue factor pathway inhibitor 2 0.036026
DDR2 discoidin domain receptor tyrosine kinase 2 0.036005
ZNF638 zinc finger protein 638 0.0358723
VEGFA vascular endothelial growth factor A 0.0357565
SMYD3 SET and MYND domain containing 3 0.0357258
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0355631
CDK19 cyclin-dependent kinase 19 0.035457
NCKAP1 NCK-associated protein 1 0.0354562
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0353745
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0351558
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0351176
APP amyloid beta (A4) precursor protein 0.0336541
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0336265
RPS3 ribosomal protein S3 0.0332818
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.033137
WAC WW domain containing adaptor with coiled-coil 0.0324655
CEP250 centrosomal protein 250kDa 0.0322687
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0320295
MAP2K1 mitogen-activated protein kinase kinase 1 0.0317553
MMP2 matrix metallopeptidase 2 0.0309938
LMNA lamin A/C 0.0307502
MATR3 matrin 3 0.030695
SUCO SUN domain containing ossification factor 0.0306462
AKAP9 A kinase (PRKA) anchor protein 9 0.0304864
DSTN destrin (actin depolymerizing factor) 0.0301002
RPL4 ribosomal protein L4 0.0299863
CAPZB capping protein (actin filament) muscle Z-line, beta 0.029897
RPL37A ribosomal protein L37a 0.0296079
CREB3L2 cAMP responsive element binding protein 3-like 2 0.029592
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0295822
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0293993
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0293921
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0293897
RPL13A ribosomal protein L13a 0.0293816
SKAP2 src kinase associated phosphoprotein 2 0.0292816
NBAS neuroblastoma amplified sequence 0.0290712
RBM39 RNA binding motif protein 39 0.0288793
COL6A1 collagen, type VI, alpha 1 0.0288494
NACA nascent polypeptide-associated complex alpha subunit 0.0285274
ELP2 elongator acetyltransferase complex subunit 2 0.0284621
RPS12 ribosomal protein S12 0.0284596
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0283972
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0281567
GSK3B glycogen synthase kinase 3 beta 0.0281517
FAM219A family with sequence similarity 219, member A 0.0281124
MBD5 methyl-CpG binding domain protein 5 0.0277802
FLNA filamin A, alpha 0.0277674
ACTG1 actin gamma 1 0.0277371
ZMIZ1 zinc finger, MIZ-type containing 1 0.0277304
TPM1 tropomyosin 1 (alpha) 0.0276717
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0275724
PTPRM protein tyrosine phosphatase, receptor type, M 0.0274917
BBS9 Bardet-Biedl syndrome 9 0.0274349
FNDC3A fibronectin type III domain containing 3A 0.0273734
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.027182
RPL11 ribosomal protein L11 0.0271107

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.250673
FN1 fibronectin 1 -0.215646
STC1 stanniocalcin 1 -0.123104
STAT1 signal transducer and activator of transcription 1, 91kDa -0.110412
VIM vimentin -0.109689
NDRG1 N-myc downstream regulated 1 -0.0844025
FTL ferritin, light polypeptide -0.0831675
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0733517
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0733469
CD44 CD44 molecule (Indian blood group) -0.0655872
IFI6 interferon, alpha-inducible protein 6 -0.0621607
IFI16 interferon, gamma-inducible protein 16 -0.061947
MT2A metallothionein 2A -0.0611507
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0600915
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0565076
CLIC4 chloride intracellular channel 4 -0.0538484
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0531986
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0485997
FRMD4A FERM domain containing 4A -0.04821
SP100 SP100 nuclear antigen -0.0479942
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0476697
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0455711
ANGPTL4 angiopoietin-like 4 -0.0446008
IFIH1 interferon induced with helicase C domain 1 -0.0440057
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0426453
EGR1 early growth response 1 -0.0418645
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0414029
NRP1 neuropilin 1 -0.0413261
COL1A2 collagen, type I, alpha 2 -0.0412669
MEF2A myocyte enhancer factor 2A -0.0395757
SAMD9 sterile alpha motif domain containing 9 -0.0393777
IFI44 interferon-induced protein 44 -0.0377969
IER3 immediate early response 3 -0.0356309
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.035555
LDHA lactate dehydrogenase A -0.0354636
MX1 MX dynamin-like GTPase 1 -0.0336272
PDIA3 protein disulfide isomerase family A, member 3 -0.0333301
INHBA inhibin, beta A -0.0325737
RYBP RING1 and YY1 binding protein -0.0322821
RAB7A RAB7A, member RAS oncogene family -0.0319464
EML5 echinoderm microtubule associated protein like 5 -0.0307555
SVIL supervillin -0.0299002
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0298882
FNDC3B fibronectin type III domain containing 3B -0.0297242
LOC102724023 ES1 protein homolog, mitochondrial -0.0295619
IGFBP3 insulin-like growth factor binding protein 3 -0.0292842
FTH1 ferritin, heavy polypeptide 1 -0.0291651
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0291457
EPAS1 endothelial PAS domain protein 1 -0.0291142
VDAC1 voltage-dependent anion channel 1 -0.0284814
VCL vinculin -0.0283736
CDCP1 CUB domain containing protein 1 -0.0282704
PLIN2 perilipin 2 -0.0281791
IFI44L interferon-induced protein 44-like -0.0278057
IFITM3 interferon induced transmembrane protein 3 -0.0276828
ANXA2 annexin A2 -0.0273462
LOX lysyl oxidase -0.0271845
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0270576
GLIS3 GLIS family zinc finger 3 -0.0269988
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0264215
PFN1 profilin 1 -0.0263462
NAV1 neuron navigator 1 -0.0260913
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0257394
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0256196
CCNL1 cyclin L1 -0.0255611
CDH13 cadherin 13 -0.0255123
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0253008
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0250473
FOSL1 FOS-like antigen 1 -0.0247327
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0245811
APCDD1L adenomatosis polyposis coli down-regulated 1-like -0.0241111
MORF4L2 mortality factor 4 like 2 -0.0240299
PLSCR1 phospholipid scramblase 1 -0.0237551
CCDC88A coiled-coil domain containing 88A -0.0237416
NCOA7 nuclear receptor coactivator 7 -0.0235614
TGFB1 transforming growth factor, beta 1 -0.0233377
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.023133
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0229199
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0228424
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0226782
PMP22 peripheral myelin protein 22 -0.0225457
JUN jun proto-oncogene -0.0224729
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0224284
NABP1 nucleic acid binding protein 1 -0.0223805
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0223708
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0219523
STK17A serine/threonine kinase 17a -0.0218443
RIGI RNA sensor RIG-I -0.0218342
GLS2 glutaminase 2 (liver, mitochondrial) -0.0215772
LPCAT2 lysophosphatidylcholine acyltransferase 2 -0.0215731
EHD2 EH-domain containing 2 -0.0215112
WWTR1 WW domain containing transcription regulator 1 -0.0214397
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0214208
HMGA2 high mobility group AT-hook 2 -0.0213542
SAMD9L sterile alpha motif domain containing 9-like -0.0213391
MX2 MX dynamin-like GTPase 2 -0.0202666
DIAPH2 diaphanous-related formin 2 -0.0200574
ZNF217 zinc finger protein 217 -0.0199312
SHISA5 shisa family member 5 -0.0196199
IFITM1 interferon induced transmembrane protein 1 -0.0196117