Irinotecan (hydrochloride)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.102503
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0902342
SRRM2 serine/arginine repetitive matrix 2 0.0877752
SAMD4A sterile alpha motif domain containing 4A 0.0847044
PDE4B phosphodiesterase 4B, cAMP-specific 0.0824805
EEF2 eukaryotic translation elongation factor 2 0.0805086
RPL3 ribosomal protein L3 0.0793596
SSBP2 single-stranded DNA binding protein 2 0.0716165
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0714976
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0706412
MSI2 musashi RNA-binding protein 2 0.0619171
ANKRD11 ankyrin repeat domain 11 0.0598485
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0584679
GARS1 glycyl-tRNA synthetase 1 0.0584248
CLIP1 CAP-GLY domain containing linker protein 1 0.0577177
EZR ezrin 0.0571058
ENO2 enolase 2 (gamma, neuronal) 0.0568183
ANK2 ankyrin 2, neuronal 0.0566554
PDGFC platelet derived growth factor C 0.05326
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0526826
N4BP2L2 NEDD4 binding protein 2-like 2 0.0525013
SESN2 sestrin 2 0.052438
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0499821
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0485127
ZNF292 zinc finger protein 292 0.0483454
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0472287
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.047176
PCBP2 poly(rC) binding protein 2 0.046403
DSCAM Down syndrome cell adhesion molecule 0.045837
RNF145 ring finger protein 145 0.0452992
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0450403
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0434784
VMP1 vacuole membrane protein 1 0.0426675
PSAT1 phosphoserine aminotransferase 1 0.0426482
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.041599
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0409985
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0400698
EXT1 exostosin glycosyltransferase 1 0.0397408
VEGFA vascular endothelial growth factor A 0.039023
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0388642
MED13 mediator complex subunit 13 0.0387989
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0387939
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0387177
ZFAND3 zinc finger, AN1-type domain 3 0.0387048
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0382032
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0382004
MED13L mediator complex subunit 13-like 0.037447
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0371162
HSPA8 heat shock 70kDa protein 8 0.0371062
AKAP9 A kinase (PRKA) anchor protein 9 0.0369828
HDGF hepatoma-derived growth factor 0.0368833
NUP58 nucleoporin 58 0.0367062
ANXA1 annexin A1 0.0366457
WDR43 WD repeat domain 43 0.036587
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0360285
RAB27B RAB27B, member RAS oncogene family 0.0359945
KMT2E lysine (K)-specific methyltransferase 2E 0.0358918
SETD5 SET domain containing 5 0.0356615
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0356041
NFIA nuclear factor I/A 0.0354601
SLC38A2 solute carrier family 38, member 2 0.0350971
PTEN phosphatase and tensin homolog 0.0348038
IARS1 isoleucyl-tRNA synthetase 1 0.03426
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L 0.0338972
CREB5 cAMP responsive element binding protein 5 0.0338846
LOC112694756 uncharaterized LOC112694756 0.0335834
EIF1 eukaryotic translation initiation factor 1 0.0335072
RBM33 RNA binding motif protein 33 0.033489
FAT1 FAT atypical cadherin 1 0.0329858
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.03292
RPS12 ribosomal protein S12 0.0328658
CTIF CBP80/20-dependent translation initiation factor 0.0320609
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0318398
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0314411
APP amyloid beta (A4) precursor protein 0.030967
KTN1 kinectin 1 (kinesin receptor) 0.0309634
ITSN1 intersectin 1 (SH3 domain protein) 0.0306853
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0306321
PLXNA1 plexin A1 0.0302991
MARS1 methionyl-tRNA synthetase 1 0.0300667
SET SET nuclear proto-oncogene 0.029796
JMJD1C jumonji domain containing 1C 0.0296905
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0291735
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0291363
LPP LIM domain containing preferred translocation partner in lipoma 0.0291333
GATA6 GATA binding protein 6 0.0289436
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0288374
PNN pinin, desmosome associated protein 0.0287769
EPS8 epidermal growth factor receptor pathway substrate 8 0.0286339
FHAD1 forkhead-associated (FHA) phosphopeptide binding domain 1 0.0285666
NFE2L1 nuclear factor, erythroid 2-like 1 0.0285128
HELZ helicase with zinc finger 0.0283698
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0282991
PREPL prolyl endopeptidase-like 0.0280308
RUSC2 RUN and SH3 domain containing 2 0.0280056
BCLAF1 BCL2-associated transcription factor 1 0.0279416
TNIP1 TNFAIP3 interacting protein 1 0.0278031
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0274661
RBM26 RNA binding motif protein 26 0.0274374
PRRC2C proline-rich coiled-coil 2C 0.0274296

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.230091
VCL vinculin -0.190105
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.187308
PTMA prothymosin, alpha -0.12046
PKM pyruvate kinase, muscle -0.112242
ADAM10 ADAM metallopeptidase domain 10 -0.104726
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0993025
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0979833
AHNAK AHNAK nucleoprotein -0.093055
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0740178
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0738742
TPT1 tumor protein, translationally-controlled 1 -0.06642
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.052362
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0503983
BMP10 bone morphogenetic protein 10 -0.0498606
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0497596
NBEA neurobeachin -0.0489952
S100A6 S100 calcium binding protein A6 -0.0447184
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.044648
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0425519
MYO5C myosin VC -0.0422002
SPRY4 sprouty homolog 4 (Drosophila) -0.0413315
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0395863
RPL35A ribosomal protein L35a -0.038649
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0384764
EML4 echinoderm microtubule associated protein like 4 -0.03807
CCND1 cyclin D1 -0.0376289
IFI16 interferon, gamma-inducible protein 16 -0.0375243
RPLP1 ribosomal protein, large, P1 -0.0373571
FOXP1 forkhead box P1 -0.0370646
CAMKMT calmodulin-lysine N-methyltransferase -0.0362565
GLI3 GLI family zinc finger 3 -0.0341262
DUSP6 dual specificity phosphatase 6 -0.0338588
DLG1 discs, large homolog 1 (Drosophila) -0.0333602
ACTG1 actin gamma 1 -0.0333059
NAV2 neuron navigator 2 -0.0324995
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0323314
RPS24 ribosomal protein S24 -0.0321558
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.031114
TMSB4X thymosin beta 4, X-linked -0.0310384
SMNDC1 survival motor neuron domain containing 1 -0.031034
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0308704
MKI67 marker of proliferation Ki-67 -0.0304609
HJURP Holliday junction recognition protein -0.0304334
TJP1 tight junction protein 1 -0.029164
PRDX2 peroxiredoxin 2 -0.0289164
DIAPH2 diaphanous-related formin 2 -0.0288851
RRBP1 ribosome binding protein 1 -0.028563
OSMR oncostatin M receptor -0.0275936
HSPB1 heat shock 27kDa protein 1 -0.0267214
ENO1 enolase 1, (alpha) -0.0267096
S100A4 S100 calcium binding protein A4 -0.0266553
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0265465
RPS27A ribosomal protein S27a -0.0263382
HMGB1 high mobility group box 1 -0.0262183
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0261444
LDHA lactate dehydrogenase A -0.0258681
CANX calnexin -0.0258254
TAS2R14 taste receptor, type 2, member 14 -0.0253005
ARL2BP ADP-ribosylation factor-like 2 binding protein -0.0252622
RPL34 ribosomal protein L34 -0.0250811
BMP2K BMP2 inducible kinase -0.0248402
FTL ferritin, light polypeptide -0.0248028
VDAC1 voltage-dependent anion channel 1 -0.0246337
MYL12B myosin, light chain 12B, regulatory -0.0243561
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0243321
TM4SF1 transmembrane 4 L six family member 1 -0.0242481
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0238943
KLF6 Kruppel-like factor 6 -0.02384
TOB1 transducer of ERBB2, 1 -0.0238256
THBD thrombomodulin -0.0235649
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.023164
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.02309
FHIT fragile histidine triad -0.0227297
PFN1 profilin 1 -0.0226028
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0225745
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0225741
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0223933
S100A10 S100 calcium binding protein A10 -0.0220055
IFI6 interferon, alpha-inducible protein 6 -0.0216569
CPED1 cadherin-like and PC-esterase domain containing 1 -0.021537
SP100 SP100 nuclear antigen -0.0212627
SDCBP syndecan binding protein (syntenin) -0.0211556
LOXL3 lysyl oxidase-like 3 -0.0210266
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0210059
ZBTB20 zinc finger and BTB domain containing 20 -0.0208887
EVI5 ecotropic viral integration site 5 -0.0205574
TMEM263 transmembrane protein 263 -0.0204147
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0203906
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0203512
IFITM1 interferon induced transmembrane protein 1 -0.0198901
IFITM3 interferon induced transmembrane protein 3 -0.0198143
RAB2A RAB2A, member RAS oncogene family -0.0194366
NPAS2 neuronal PAS domain protein 2 -0.0193796
RPLP0 ribosomal protein, large, P0 -0.0192938
MZT1 mitotic spindle organizing protein 1 -0.0192351
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0189912
ABI1 abl-interactor 1 -0.0189689
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0186681
DPYD dihydropyrimidine dehydrogenase -0.0185738