Irinotecan (hydrochloride)_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.222002
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.163287
HLA-B major histocompatibility complex, class I, B 0.149717
ADM adrenomedullin 0.118523
PGK1 phosphoglycerate kinase 1 0.108723
VEGFA vascular endothelial growth factor A 0.107832
HLA-A major histocompatibility complex, class I, A 0.101501
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0995875
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0977612
EEF2 eukaryotic translation elongation factor 2 0.0956174
EIF1 eukaryotic translation initiation factor 1 0.0791443
RPL23 ribosomal protein L23 0.078471
ATP13A3 ATPase type 13A3 0.0753264
GOLGA4 golgin A4 0.0749448
ZMIZ1 zinc finger, MIZ-type containing 1 0.0741279
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0696808
RPS6 ribosomal protein S6 0.0696127
SFTPA2 surfactant protein A2 0.0658193
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0657339
CADM1 cell adhesion molecule 1 0.065567
SRRM2 serine/arginine repetitive matrix 2 0.063374
ZFAND3 zinc finger, AN1-type domain 3 0.0607719
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0582534
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0570676
MSN moesin 0.0566479
RPS3 ribosomal protein S3 0.055914
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0554173
ANKRD11 ankyrin repeat domain 11 0.05531
OPTN optineurin 0.0544168
RPS12 ribosomal protein S12 0.0524244
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0516069
HELZ helicase with zinc finger 0.0513567
EPS8 epidermal growth factor receptor pathway substrate 8 0.0510453
FMNL2 formin-like 2 0.0494355
ZNF292 zinc finger protein 292 0.0493319
PCBP2 poly(rC) binding protein 2 0.0484919
UGCG UDP-glucose ceramide glucosyltransferase 0.0484263
PDE10A phosphodiesterase 10A 0.0477344
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0477103
ACTG1 actin gamma 1 0.0474364
GARS1 glycyl-tRNA synthetase 1 0.0473399
OGA O-GlcNAcase 0.0472916
PRRC2C proline-rich coiled-coil 2C 0.0458987
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.045331
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0449383
NONO non-POU domain containing, octamer-binding 0.0447331
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0435242
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0422296
WDFY1 WD repeat and FYVE domain containing 1 0.0420916
CALR calreticulin 0.0414199
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0412868
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0409726
NAV2 neuron navigator 2 0.0406097
KDM6A lysine (K)-specific demethylase 6A 0.0405122
USP9X ubiquitin specific peptidase 9, X-linked 0.0403387
MATR3 matrin 3 0.040225
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0398171
RPL37A ribosomal protein L37a 0.0396653
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0390969
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0390827
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0390313
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0387541
TMSB4X thymosin beta 4, X-linked 0.0387155
CDK19 cyclin-dependent kinase 19 0.0386024
PICALM phosphatidylinositol binding clathrin assembly protein 0.0382922
STC2 stanniocalcin 2 0.0378033
POTEF POTE ankyrin domain family, member F 0.0378029
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0378023
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0377881
RPL11 ribosomal protein L11 0.0377283
BRD2 bromodomain containing 2 0.037486
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0373395
CCBE1 collagen and calcium binding EGF domains 1 0.0373019
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0364698
RND3 Rho family GTPase 3 0.0361811
CDH13 cadherin 13 0.0352614
WAC WW domain containing adaptor with coiled-coil 0.03519
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0349246
RPL7A ribosomal protein L7a 0.0348061
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0347753
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0346841
EIF4B eukaryotic translation initiation factor 4B 0.0342921
UBA6 ubiquitin-like modifier activating enzyme 6 0.0340647
PLIN2 perilipin 2 0.0337223
SNX9 sorting nexin 9 0.0337021
SHB Src homology 2 domain containing adaptor protein B 0.0332893
AFF3 AF4/FMR2 family, member 3 0.0331039
NT5C2 5'-nucleotidase, cytosolic II 0.0323804
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0322311
HSPA8 heat shock 70kDa protein 8 0.0316737
BCLAF1 BCL2-associated transcription factor 1 0.0316113
CYLD cylindromatosis (turban tumor syndrome) 0.0315697
NAP1L1 nucleosome assembly protein 1-like 1 0.0315009
TSC22D2 TSC22 domain family, member 2 0.0314653
B2M beta-2-microglobulin 0.0313231
INSIG1 insulin induced gene 1 0.0311495
APLP2 amyloid beta (A4) precursor-like protein 2 0.0311339
ESYT2 extended synaptotagmin-like protein 2 0.0310077
SETD5 SET domain containing 5 0.0309886
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0309731

decreased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.171586
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.110875
VCL vinculin -0.102954
CD44 CD44 molecule (Indian blood group) -0.096567
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0898865
BICC1 BicC family RNA binding protein 1 -0.0886265
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0837912
FRMD4A FERM domain containing 4A -0.0794523
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0764917
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0701181
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0690628
SOD2 superoxide dismutase 2, mitochondrial -0.0656053
IFI16 interferon, gamma-inducible protein 16 -0.063276
IER3 immediate early response 3 -0.0625398
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0587263
NABP1 nucleic acid binding protein 1 -0.0577559
GLIS3 GLIS family zinc finger 3 -0.0576946
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0572808
EXT1 exostosin glycosyltransferase 1 -0.0560943
OSMR oncostatin M receptor -0.0558877
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0556573
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.054231
KLF6 Kruppel-like factor 6 -0.0495272
VIM vimentin -0.0486696
RIGI RNA sensor RIG-I -0.0420715
MKI67 marker of proliferation Ki-67 -0.038551
RRBP1 ribosome binding protein 1 -0.0385064
NAMPT nicotinamide phosphoribosyltransferase -0.0372319
RTN4 reticulon 4 -0.0365629
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0355378
IFI6 interferon, alpha-inducible protein 6 -0.0347075
SP100 SP100 nuclear antigen -0.0344709
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0338869
MX1 MX dynamin-like GTPase 1 -0.0338718
NAV1 neuron navigator 1 -0.0337567
RNF213 ring finger protein 213 -0.0332294
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0325883
GPC6 glypican 6 -0.0321982
ZMYND8 zinc finger, MYND-type containing 8 -0.0315225
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0307325
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0305966
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0305913
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0303213
HMGA2 high mobility group AT-hook 2 -0.0300924
TNS3 tensin 3 -0.0289196
THBS1 thrombospondin 1 -0.0282041
RAD51B RAD51 paralog B -0.0280561
FAM20C family with sequence similarity 20, member C -0.0276495
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0275609
EHBP1 EH domain binding protein 1 -0.0271586
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0267519
SAMD9 sterile alpha motif domain containing 9 -0.0266643
HDAC9 histone deacetylase 9 -0.0261065
ZNFX1 zinc finger, NFX1-type containing 1 -0.025945
NT5E 5'-nucleotidase, ecto (CD73) -0.0258249
SLC38A2 solute carrier family 38, member 2 -0.0254949
ARHGAP5 Rho GTPase activating protein 5 -0.0251844
SYAP1 synapse associated protein 1 -0.0251397
RPS24 ribosomal protein S24 -0.0250441
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0245785
STK17A serine/threonine kinase 17a -0.0245249
MX2 MX dynamin-like GTPase 2 -0.0244418
THBS2 thrombospondin 2 -0.0242295
ADNP activity-dependent neuroprotector homeobox -0.0241448
IFIH1 interferon induced with helicase C domain 1 -0.023899
MT2A metallothionein 2A -0.0234265
IFITM1 interferon induced transmembrane protein 1 -0.023177
XAF1 XIAP associated factor 1 -0.0229838
CDCP1 CUB domain containing protein 1 -0.0229837
CLIC4 chloride intracellular channel 4 -0.022887
AHNAK AHNAK nucleoprotein -0.0226675
NPC1 Niemann-Pick disease, type C1 -0.0223425
EGR1 early growth response 1 -0.0221214
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0220574
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0219131
COL1A1 collagen, type I, alpha 1 -0.0218547
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0218251
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0218117
VDAC1 voltage-dependent anion channel 1 -0.0217563
AKAP12 A kinase (PRKA) anchor protein 12 -0.021644
GNAS GNAS complex locus -0.0215855
NFE2L2 nuclear factor, erythroid 2-like 2 -0.021576
NIPBL Nipped-B homolog (Drosophila) -0.02137
SDC4 syndecan 4 -0.0213127
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0213014
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.021228
LOX lysyl oxidase -0.021068
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0209505
KLHL5 kelch-like family member 5 -0.0207738
GLIPR1 GLI pathogenesis-related 1 -0.0204842
FBXO11 F-box protein 11 -0.0204036
FRMD5 FERM domain containing 5 -0.020401
DIAPH2 diaphanous-related formin 2 -0.0202928
BCAS3 breast carcinoma amplified sequence 3 -0.0202031
PSD3 pleckstrin and Sec7 domain containing 3 -0.0199486
PLSCR1 phospholipid scramblase 1 -0.019489
BCAR3 breast cancer anti-estrogen resistance 3 -0.0194851
CSNK1A1 casein kinase 1, alpha 1 -0.0193282
ETV6 ets variant 6 -0.019264
STC1 stanniocalcin 1 -0.0192239