Irinotecan (hydrochloride)_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Irinotecan (hydrochloride) perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Irinotecan (hydrochloride)_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT18 keratin 18, type I 0.128106
KRT8 keratin 8, type II 0.102119
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0932158
PLEC plectin 0.0895609
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0895416
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0888628
ESYT2 extended synaptotagmin-like protein 2 0.0801113
RPS6 ribosomal protein S6 0.0736596
SRRM2 serine/arginine repetitive matrix 2 0.0691933
NDRG1 N-myc downstream regulated 1 0.068919
EIF1 eukaryotic translation initiation factor 1 0.0677475
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0665652
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0644579
HLA-A major histocompatibility complex, class I, A 0.0637453
PRELID2 PRELI domain containing 2 0.0625952
TMSB4X thymosin beta 4, X-linked 0.0625265
HSPA8 heat shock 70kDa protein 8 0.0598549
RPS21 ribosomal protein S21 0.0558571
RPS3 ribosomal protein S3 0.0531396
TPT1 tumor protein, translationally-controlled 1 0.0529291
PGK1 phosphoglycerate kinase 1 0.0528786
ZNRF3 zinc and ring finger 3 0.0526926
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.0520059
ANKRD11 ankyrin repeat domain 11 0.0518931
PTMA prothymosin, alpha 0.0513776
SETD5 SET domain containing 5 0.0495566
USP3 ubiquitin specific peptidase 3 0.0475763
NACA nascent polypeptide-associated complex alpha subunit 0.0475475
SDK1 sidekick cell adhesion molecule 1 0.0469437
ARHGAP32 Rho GTPase activating protein 32 0.0465263
MSI2 musashi RNA-binding protein 2 0.0447426
RPL35A ribosomal protein L35a 0.0444877
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0436841
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0429704
ANXA11 annexin A11 0.0421933
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0419523
THOC2 THO complex 2 0.0402168
MYH9 myosin, heavy chain 9, non-muscle 0.0398605
AFDN afadin, adherens junction formation factor 0.038986
CEMIP cell migration inducing protein, hyaluronan binding 0.0385017
RNF43 ring finger protein 43 0.038147
DEK DEK proto-oncogene 0.037937
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0369555
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0365729
RNF149 ring finger protein 149 0.0364134
LENG8 leukocyte receptor cluster (LRC) member 8 0.036194
LMTK2 lemur tyrosine kinase 2 0.0357908
CLIP2 CAP-GLY domain containing linker protein 2 0.0357045
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0351261
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0349694
RPL7A ribosomal protein L7a 0.0349443
PRRC2C proline-rich coiled-coil 2C 0.0347211
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0344964
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0344224
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0343833
WSB1 WD repeat and SOCS box containing 1 0.0343768
CXXC5 CXXC finger protein 5 0.0341477
HOXB6 homeobox B6 0.0340687
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0339157
DNM2 dynamin 2 0.033858
RPL11 ribosomal protein L11 0.0338535
HOXA3 homeobox A3 0.033329
ZMYND8 zinc finger, MYND-type containing 8 0.0332094
MYH14 myosin, heavy chain 14, non-muscle 0.0331753
RPL37 ribosomal protein L37 0.0330547
RICTOR RPTOR independent companion of MTOR, complex 2 0.0327929
PRPF38B pre-mRNA processing factor 38B 0.0327885
ADM adrenomedullin 0.0327604
RREB1 ras responsive element binding protein 1 0.0326897
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0326544
STC2 stanniocalcin 2 0.032648
RPS12 ribosomal protein S12 0.0321873
RPL37A ribosomal protein L37a 0.0320283
HOXB3 homeobox B3 0.0319759
RAB6A RAB6A, member RAS oncogene family 0.0314785
VEGFA vascular endothelial growth factor A 0.0310597
PLEKHA7 pleckstrin homology domain containing, family A member 7 0.0309968
PRELID3B PRELI domain containing 3B 0.0307902
OXR1 oxidation resistance 1 0.0305926
FRMD5 FERM domain containing 5 0.0301956
NFIA nuclear factor I/A 0.0300972
AKAP13 A kinase (PRKA) anchor protein 13 0.0297928
YEATS2 YEATS domain containing 2 0.0297523
MACC1 metastasis associated in colon cancer 1 0.0296819
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0294982
KIAA1671 KIAA1671 0.02937
GARS1 glycyl-tRNA synthetase 1 0.0292923
TCERG1 transcription elongation regulator 1 0.0292362
NCOR2 nuclear receptor corepressor 2 0.0291309
NUMA1 nuclear mitotic apparatus protein 1 0.0288353
RPLP2 ribosomal protein, large, P2 0.0286989
DIDO1 death inducer-obliterator 1 0.0285059
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0283152
HLA-B major histocompatibility complex, class I, B 0.0282467
BACE2 beta-site APP-cleaving enzyme 2 0.0282315
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0281926
RPL13A ribosomal protein L13a 0.0281195
TRIO trio Rho guanine nucleotide exchange factor 0.0281135
FLNA filamin A, alpha 0.0274676
ATP9A ATPase, class II, type 9A 0.027399

decreased expression

Symbol Name Standardized Value
UBC ubiquitin C -0.167978
NCEH1 neutral cholesterol ester hydrolase 1 -0.166958
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.156642
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.119823
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.103111
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.091451
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0885897
FTH1 ferritin, heavy polypeptide 1 -0.0874053
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0821448
IFRD1 interferon-related developmental regulator 1 -0.0794787
ANXA2 annexin A2 -0.0744019
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0737788
CANX calnexin -0.0736818
VCL vinculin -0.0731077
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0689756
MYO1E myosin IE -0.0687328
EGR1 early growth response 1 -0.0683333
GOLGB1 golgin B1 -0.0617196
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0589865
RAB7A RAB7A, member RAS oncogene family -0.0564941
RPS27A ribosomal protein S27a -0.0562801
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0544477
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0533383
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0526758
LDHA lactate dehydrogenase A -0.0504472
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0494527
RYBP RING1 and YY1 binding protein -0.049034
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0489361
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0488794
SPDYA speedy/RINGO cell cycle regulator family member A -0.0484936
GNAS GNAS complex locus -0.0481949
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0459828
TMSB10 thymosin beta 10 -0.0444794
CEMIP2 cell migration inducing hyaluronidase 2 -0.0444313
STAU1 staufen double-stranded RNA binding protein 1 -0.0440906
CSNK1A1 casein kinase 1, alpha 1 -0.0437896
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0429808
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0428061
RAD21 RAD21 homolog (S. pombe) -0.0425167
IER3 immediate early response 3 -0.0419471
TMEM123 transmembrane protein 123 -0.0398689
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0397011
IFIH1 interferon induced with helicase C domain 1 -0.0391617
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0389644
TGFA transforming growth factor, alpha -0.0387314
FTL ferritin, light polypeptide -0.0380009
ZNFX1 zinc finger, NFX1-type containing 1 -0.0376775
IPO7 importin 7 -0.0376042
RHEB Ras homolog enriched in brain -0.0371352
PCSK5 proprotein convertase subtilisin/kexin type 5 -0.0364053
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -0.0359042
SLC38A1 solute carrier family 38, member 1 -0.0354767
EPS8 epidermal growth factor receptor pathway substrate 8 -0.035474
UBAP2 ubiquitin associated protein 2 -0.0352732
MALT1 MALT1 paracaspase -0.0350132
ECT2 epithelial cell transforming 2 -0.0345455
ZNF207 zinc finger protein 207 -0.0343942
RIGI RNA sensor RIG-I -0.0342057
JUN jun proto-oncogene -0.0337831
INTS6 integrator complex subunit 6 -0.0337497
FBXO11 F-box protein 11 -0.0332704
CALU calumenin -0.0330692
BZW2 basic leucine zipper and W2 domains 2 -0.0328376
SETX senataxin -0.0327311
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0325805
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0325721
POTEF POTE ankyrin domain family, member F -0.0325054
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0322148
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0320189
PCBP2 poly(rC) binding protein 2 -0.0319884
PERP PERP, TP53 apoptosis effector -0.0319074
PTPRK protein tyrosine phosphatase, receptor type, K -0.0317865
RAB1A RAB1A, member RAS oncogene family -0.0317735
OXSR1 oxidative stress responsive 1 -0.0312748
WWC1 WW and C2 domain containing 1 -0.0311498
PLSCR1 phospholipid scramblase 1 -0.0304875
TASOR2 transcription activation suppressor family member 2 -0.0301713
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0298698
AHNAK AHNAK nucleoprotein -0.0297288
TJP1 tight junction protein 1 -0.0297248
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0297178
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0294874
HMGB2 high mobility group box 2 -0.0291192
UBE2D1 ubiquitin-conjugating enzyme E2D 1 -0.0288498
HDAC9 histone deacetylase 9 -0.0284522
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0283759
SP100 SP100 nuclear antigen -0.028274
RCOR1 REST corepressor 1 -0.028163
VMP1 vacuole membrane protein 1 -0.0281142
PDIA4 protein disulfide isomerase family A, member 4 -0.0277923
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0277292
PDIA3 protein disulfide isomerase family A, member 3 -0.02735
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0272833
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0272104
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0269628
ZNF217 zinc finger protein 217 -0.026931
ATAD2 ATPase family, AAA domain containing 2 -0.0269294
ENO1 enolase 1, (alpha) -0.0267637
CCND1 cyclin D1 -0.0266041
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0264539